Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 0.0e+00 1490.3 750 100.0
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.6e-219 766.1 786 55.5
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 1.4e-212 743.8 795 53.5
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 6.8e-204 714.9 799 49.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.4e-201 707.2 786 50.3
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.5e-200 702.6 807 49.1
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 5.0e-199 698.7 795 50.1
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 6.6e-199 698.4 801 48.8
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.9e-198 696.8 790 49.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 5.6e-198 695.3 819 49.9
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 5.6e-198 695.3 790 49.2
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 7.3e-198 694.9 801 48.7
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 8.0e-197 691.4 783 51.9
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.6e-195 686.4 801 48.9
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 2.2e-194 683.3 786 50.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.4e-193 680.6 801 49.3
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 3.2e-193 679.5 792 49.2
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 3.2e-193 679.5 785 50.8
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 7.0e-193 678.3 776 50.4
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 3.0e-191 672.9 813 47.8
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.5e-190 670.6 823 48.2
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 2.5e-190 669.8 798 47.9
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 4.3e-190 669.1 816 48.3
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 2.1e-189 666.8 778 49.6
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 4.7e-189 665.6 777 48.9
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 8.0e-189 664.8 782 49.0
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 1.1e-188 664.5 807 48.0
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 6.8e-188 661.8 826 47.6
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 8.9e-188 661.4 827 47.3
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.5e-187 660.6 775 48.6
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 2.0e-187 660.2 796 47.7
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 3.4e-187 659.4 721 49.8
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 4.4e-187 659.1 818 47.4
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.3e-186 657.5 784 49.2
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.3e-186 657.5 799 47.2
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 6.4e-186 655.2 815 48.0
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.4e-185 654.1 769 50.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 3.2e-185 652.9 796 46.9
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 3.2e-185 652.9 796 47.4
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.1e-185 652.5 804 48.3
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.1e-185 652.5 810 47.5
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 4.1e-185 652.5 774 49.4
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 9.2e-185 651.4 803 48.1
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.0e-184 650.2 803 47.1
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 6.0e-184 648.7 725 49.8
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 6.0e-184 648.7 805 47.0
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 6.0e-184 648.7 874 45.0
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.0e-183 647.9 825 45.9
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.3e-183 647.5 779 47.2
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.3e-183 646.7 685 52.0
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.3e-183 646.7 841 44.5
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.0e-183 646.4 812 47.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 3.0e-183 646.4 792 47.2
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.2e-181 641.0 814 47.7
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.4e-180 637.5 775 46.6
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 6.8e-180 635.2 807 45.1
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.2e-179 634.4 784 46.7
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.2e-179 634.4 789 45.4
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 3.7e-178 629.4 794 45.7
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.1e-177 627.9 862 45.1
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 5.4e-177 625.5 782 45.9
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 2.7e-176 623.2 788 46.4
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 3.5e-176 622.9 767 46.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.3e-175 620.9 796 45.7
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 5.6e-174 615.5 794 45.8
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 2.4e-172 610.1 803 46.1
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 3.8e-170 602.8 781 46.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.1e-169 601.3 718 47.4
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.1e-169 601.3 814 44.1
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.4e-169 600.9 807 46.2
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 2.4e-169 600.1 765 46.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.2e-169 599.7 752 45.6
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 3.5e-168 596.3 794 45.5
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 4.6e-168 595.9 809 44.9
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 6.0e-168 595.5 788 45.7
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 2.3e-167 593.6 720 47.1
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 8.7e-167 591.7 817 43.8
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 1.5e-166 590.9 733 47.3
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.1e-165 587.0 802 44.6
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 8.1e-165 585.1 775 45.8
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 8.1e-165 585.1 806 44.3
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.4e-164 584.3 809 44.6
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 4.0e-164 582.8 777 45.2
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 6.9e-164 582.0 777 45.2
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.9e-153 547.4 768 42.4
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.8e-149 533.5 624 48.1
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 8.1e-149 531.9 801 42.8
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 3.0e-143 513.5 740 42.0
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 7.4e-134 482.3 643 45.6
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 3.7e-133 479.9 606 46.5
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 1.4e-132 478.0 757 40.0
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.1e-132 476.9 666 41.9
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.2e-128 464.9 505 48.9
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 2.7e-128 463.8 765 40.0
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 2.2e-125 454.1 797 38.3
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 5.0e-114 416.4 584 43.5
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 9.4e-113 412.1 408 52.0
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.4e-110 403.3 479 47.4
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 3.0e-103 380.6 488 46.3
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.7e-102 376.3 410 49.0
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 1.2e-91 342.0 686 34.4
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 9.5e-81 305.8 400 44.2
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 8.9e-79 299.3 694 30.1
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 3.9e-74 283.9 483 40.2
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 8.6e-74 282.7 697 32.6
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 3.1e-71 274.2 694 29.4
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.1e-68 265.8 298 52.0
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 4.1e-60 237.3 175 64.6
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 3.6e-56 224.2 1001 25.5
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 8.1e-48 196.4 218 50.5
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 9.9e-46 189.5 315 37.5
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.5e-41 175.6 152 59.2
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.8e-31 142.1 169 46.2
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 9.3e-28 129.8 124 53.2
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 2.0e-22 112.1 193 34.7
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 2.2e-16 92.0 130 43.8
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 3.7e-16 91.3 63 66.7
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 9.0e-15 86.7 152 40.8
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.8e-13 81.3 120 41.7
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.6e-11 74.7 99 49.5
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 8.8e-10 70.1 173 31.8
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 2.8e-08 65.1 93 47.3
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 1.1e-07 63.2 53 58.5
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 1.1e-07 63.2 53 58.5
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 2.6e-06 58.5 54 50.0


User provided reference genes

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