Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17670 Utricularia gibba HOM05D005049 ORTHO05D006032 8.5e-173 610.1 289 100.0
Migut.H00120 Erythranthe guttata HOM05D005049 ORTHO05D006032 1.3e-83 313.9 435 39.8
SGA_v2.0_scaffold205G41694 Striga asiatica HOM05D005049 ORTHO05D006032 1.8e-82 310.1 467 38.3
MSTRG.3171 Avicennia marina HOM05D005049 ORTHO05D006032 3.4e-81 305.8 450 39.1
Oeu004708.3 Olea europaea HOM05D005049 ORTHO05D006032 2.9e-64 249.6 468 33.5
CSS0003936 Camellia sinensis var. sinensis HOM05D005049 ORTHO05D006032 4.0e-61 239.2 447 32.0
GSVIVG01032478001 Vitis vinifera HOM05D005049 ORTHO05D006032 5.2e-61 238.8 420 34.8
Prupe.3G284100 Prunus persica HOM05D005049 ORTHO05D006032 2.0e-60 236.9 441 32.9
RcHm_v2.0_Chr2g0171441 Rosa chinensis HOM05D005049 ORTHO05D006032 2.0e-60 236.9 451 35.7
CAN.G206.31 Capsicum annuum HOM05D005049 ORTHO05D006032 2.6e-60 236.5 448 35.0
CiPaw.03G037900 Carya illinoinensis HOM05D005049 ORTHO05D006032 3.4e-60 236.1 445 33.0
Hma1.2p1_0858F.1_g229450 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 7.5e-60 235.0 454 33.3
Nn4g22794 Nelumbo nucifera HOM05D005049 ORTHO05D006032 7.5e-60 235.0 444 33.6
TAR622G0573 Trochodendron aralioides HOM05D005049 ORTHO05D006032 9.7e-60 234.6 441 32.2
Manes.17G121600 Manihot esculenta HOM05D005049 ORTHO05D006032 2.8e-59 233.0 432 33.1
Cfa007428 Carpinus fangiana HOM05D005049 ORTHO05D006032 6.3e-59 231.9 438 33.1
Medtr6g007165 Medicago truncatula HOM05D005049 ORTHO05D006032 6.3e-59 231.9 435 31.5
Lj9C583G13 Lonicera japonica HOM05D005049 ORTHO05D006032 8.3e-59 231.5 364 37.1
Aqoxy3G01017 Aquilegia oxysepala HOM05D005049 ORTHO05D006032 1.4e-58 230.7 440 33.9
Nitab4.5_0005176g0050 Nicotiana tabacum HOM05D005049 ORTHO05D006032 2.4e-58 229.9 473 32.3
MD17G1034700 Malus domestica HOM05D005049 ORTHO05D006032 5.3e-58 228.8 437 33.4
HanXRQChr07g0198731 Helianthus annuus HOM05D005049 ORTHO05D006032 2.0e-57 226.9 411 33.3
Duzib147G1079 Durio zibethinus HOM05D005049 ORTHO05D006032 4.5e-57 225.7 462 30.5
Duzib264G0847 Durio zibethinus HOM05D005049 ORTHO05D006032 1.0e-56 224.6 467 31.0
Nitab4.5_0003337g0090 Nicotiana tabacum HOM05D005049 ORTHO05D006032 1.3e-56 224.2 451 33.3
Gohir.A09G026200 Gossypium hirsutum HOM05D005049 ORTHO05D006032 2.2e-56 223.4 456 32.2
Lalb_Chr02g0160341 Lupinus albus HOM05D005049 ORTHO05D006032 3.8e-56 222.6 442 31.4
Haze_14669 Corylus avellana HOM05D005049 ORTHO05D006032 5.0e-56 222.2 468 31.0
Sc07g0003030 Simmondsia chinensis HOM05D005049 ORTHO05D006032 5.0e-56 222.2 440 31.4
Dinv35060 Davidia involucrata HOM05D005049 ORTHO05D006032 1.9e-55 220.3 454 32.4
Lsat_1_v5_gn_2_92181 Lactuca sativa HOM05D005049 ORTHO05D006032 1.9e-55 220.3 367 35.4
ECA238G2197 Erigeron canadensis HOM05D005049 ORTHO05D006032 4.2e-55 219.2 416 31.7
Thecc.04G008900 Theobroma cacao HOM05D005049 ORTHO05D006032 4.2e-55 219.2 489 30.9
Phvul.004G014500 Phaseolus vulgaris HOM05D005049 ORTHO05D006032 5.5e-55 218.8 441 31.1
Glyma.13G168600 Glycine max HOM05D005049 ORTHO05D006032 7.2e-55 218.4 445 31.0
VMungo0464G1607 Vigna mungo HOM05D005049 ORTHO05D006032 7.2e-55 218.4 433 32.6
Glyma.06G185500 Glycine max HOM05D005049 ORTHO05D006032 1.2e-54 217.6 450 31.8
PGR142G2968 Punica granatum HOM05D005049 ORTHO05D006032 1.6e-54 217.2 455 31.2
EL10Ac2g02398 Beta vulgaris HOM05D005049 ORTHO05D006032 2.1e-54 216.9 438 32.9
Lj2g0009991 Lotus japonicus HOM05D005049 ORTHO05D006032 2.1e-54 216.9 466 30.5
Gorai.006G029800 Gossypium raimondii HOM05D005049 ORTHO05D006032 2.7e-54 216.5 456 30.9
Potri.017G073200 Populus trichocarpa HOM05D005049 ORTHO05D006032 2.7e-54 216.5 454 30.6
arahy.Tifrunner.gnm1.ann1.B7LRKU Arachis hypogaea HOM05D005049 ORTHO05D006032 3.6e-54 216.1 427 31.6
Actinidia36083 Actinidia chinensis HOM05D005049 ORTHO05D006032 4.7e-54 215.7 462 30.3
Ah.11g045070 Amaranthus hybridus HOM05D005049 ORTHO05D006032 4.7e-54 215.7 444 30.9
arahy.Tifrunner.gnm1.ann1.EYLE23 Arachis hypogaea HOM05D005049 ORTHO05D006032 6.1e-54 215.3 434 31.3
Actinidia35742 Actinidia chinensis HOM05D005049 ORTHO05D006032 1.4e-53 214.2 443 31.8
arahy.Tifrunner.gnm1.ann1.41NV30 Arachis hypogaea HOM05D005049 ORTHO05D006032 1.8e-53 213.8 430 31.4
TPR.G2274 Trifolium pratense HOM05D005049 ORTHO05D006032 6.8e-53 211.8 476 29.4
Sopen02g031640 Solanum pennellii HOM05D005049 ORTHO05D006032 1.2e-52 211.1 451 33.7
MBI16_g40725_MAGBIO Magnolia biondii HOM05D005049 ORTHO05D006032 2.0e-52 210.3 449 30.5
Cpa.g.sc39.89 Carica papaya HOM05D005049 ORTHO05D006032 2.6e-52 209.9 432 31.5
Sed0008163 Sechium edule HOM05D005049 ORTHO05D006032 2.6e-52 209.9 418 33.0
PGSC0003DMG400000525 Solanum tuberosum HOM05D005049 ORTHO05D006032 4.4e-52 209.1 451 32.8
TWI12G0306 Tripterygium wilfordii HOM05D005049 ORTHO05D006032 4.4e-52 209.1 488 30.3
Eucgr.I01812 Eucalyptus grandis HOM05D005049 ORTHO05D006032 2.8e-51 206.5 447 30.4
CsaV3_3G042430 Cucumis sativus L. HOM05D005049 ORTHO05D006032 4.8e-51 205.7 417 31.9
MELO3C009957.2 Cucumis melo HOM05D005049 ORTHO05D006032 6.3e-51 205.3 417 32.1
PSO017G6025 Papaver somniferum HOM05D005049 ORTHO05D006032 2.4e-50 203.4 444 29.5
SGA_v2.0_scaffold66G22479 Striga asiatica HOM05D005049 ORTHO05D006032 5.4e-50 202.2 357 35.6
CANSAT64G0408 Cannabis sativa HOM05D005049 ORTHO05D006032 1.2e-49 201.1 425 32.0
ATR0730G137 Amborella trichopoda HOM05D005049 ORTHO05D006032 2.0e-49 200.3 435 29.9
Solyc02g086870.4 Solanum lycopersicum HOM05D005049 ORTHO05D006032 4.5e-49 199.1 441 32.2
Hund02271 Selenicereus undatus HOM05D005049 ORTHO05D006032 7.7e-49 198.4 393 34.1
Zm00001eb153900 Zea mays HOM05D005049 ORTHO05D006032 7.7e-49 198.4 435 30.3
PSO478G2829 Papaver somniferum HOM05D005049 ORTHO05D006032 1.3e-48 197.6 460 28.7
Ciclev10015290m.g Citrus clementina HOM05D005049 ORTHO05D006032 1.7e-48 197.2 427 31.1
FvH4_6g50640 Fragaria vesca HOM05D005049 ORTHO05D006032 4.2e-47 192.6 450 30.9
AUR62040116 Chenopodium quinoa HOM05D005049 ORTHO05D006032 5.5e-47 192.2 405 31.1
AUR62032496 Chenopodium quinoa HOM05D005049 ORTHO05D006032 9.5e-47 191.4 380 32.1
THA.LOC104805397 Tarenaya hassleriana HOM05D005049 ORTHO05D006032 9.5e-47 191.4 447 30.9
HPP92_021346 Vanilla planifolia HOM05D005049 ORTHO05D006032 8.0e-46 188.3 427 29.0
Aa31LG9G1340 Aethionema arabicum HOM05D005049 ORTHO05D006032 1.0e-45 188.0 434 30.2
Thhalv10027764m.g Eutrema salsugineum HOM05D005049 ORTHO05D006032 3.0e-45 186.4 440 29.3
Psat1g056840 Pisum sativum HOM05D005049 ORTHO05D006032 1.5e-44 184.1 408 30.1
Carub.0007s3535 Capsella rubella HOM05D005049 ORTHO05D006032 4.4e-44 182.6 436 30.0
Sp7g01660 Schrenkiella parvula HOM05D005049 ORTHO05D006032 4.4e-44 182.6 433 29.8
AT5G40280 Arabidopsis thaliana HOM05D005049 ORTHO05D006032 7.5e-44 181.8 439 29.4
A04p13200 Brassica napus HOM05D005049 ORTHO05D006032 9.8e-44 181.4 437 30.9
MD09G1034200 Malus domestica HOM05D005049 ORTHO05D006032 9.8e-44 181.4 451 29.7
BraA04t16979Z Brassica rapa HOM05D005049 ORTHO05D006032 1.3e-43 181.0 436 30.5
C04p46950 Brassica napus HOM05D005049 ORTHO05D006032 1.7e-43 180.6 436 30.5
FAN14G5348 Fragaria x ananassa HOM05D005049 ORTHO05D006032 2.2e-43 180.3 438 30.8
BolC4t26289H Brassica oleracea HOM05D005049 ORTHO05D006032 1.4e-42 177.6 444 30.0
A04p15750 Brassica napus HOM05D005049 ORTHO05D006032 1.8e-42 177.2 440 28.6
BraA04t17209Z Brassica rapa HOM05D005049 ORTHO05D006032 1.8e-42 177.2 440 28.6
DCAR_015040 Daucus carota HOM05D005049 ORTHO05D006032 2.1e-38 163.7 379 30.9
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 3.6e-38 162.9 385 30.1
Peaxi162Scf00129g01124 Petunia axillaris HOM05D005049 ORTHO05D006032 6.1e-38 162.2 266 41.0
QL02p076639 Quercus lobata HOM05D005049 ORTHO05D006032 6.1e-38 162.2 108 63.9
Cc07_g02250 Coffea canephora HOM05D005049 ORTHO05D006032 1.0e-37 161.4 274 35.0
Ca_04197_v3 Cicer arietinum L. HOM05D005049 ORTHO05D006032 3.1e-37 159.8 374 28.9
Prupe.6G347800 Prunus persica HOM05D005049 ORTHO05D006032 9.8e-36 154.8 358 30.4
Rhsim10G0022300 Rhododendron simsii HOM05D005049 ORTHO05D006032 1.1e-34 151.4 182 45.1
Sabra17G0060100 Salix brachista HOM05D005049 ORTHO05D006032 3.2e-34 149.8 116 52.6
Atru.chr6.2298 Acer truncatum HOM05D005049 ORTHO05D006032 4.1e-34 149.4 237 36.3
Cc07_g02260 Coffea canephora HOM05D005049 ORTHO05D006032 7.0e-34 148.7 104 58.7
SMO172G0207 Selaginella moellendorffii HOM05D005049 ORTHO05D006032 6.0e-33 145.6 411 27.3
vmacro05822 Vaccinium macrocarpon HOM05D005049 ORTHO05D006032 6.0e-33 145.6 183 44.3
Pp3c14_3780 Physcomitrium patens HOM05D005049 ORTHO05D006032 1.0e-32 144.8 499 26.1
Gohir.D09G025601 Gossypium hirsutum HOM05D005049 ORTHO05D006032 3.9e-32 142.9 185 45.4
Manes.17G121264 Manihot esculenta HOM05D005049 ORTHO05D006032 6.6e-32 142.1 174 44.8
CARHR261810 Cardamine hirsuta HOM05D005049 ORTHO05D006032 2.5e-31 140.2 225 37.3
Lj7A514T33 Lonicera japonica HOM05D005049 ORTHO05D006032 2.5e-31 140.2 193 40.4
AagrBONN_evm.TU.Sc2ySwM_117.2022 Anthoceros agrestis HOM05D005049 ORTHO05D006032 7.3e-31 138.7 472 25.4
BcaB06g27470 Brassica carinata HOM05D005049 ORTHO05D006032 2.1e-30 137.1 243 37.9
COL.COLO4_28950 Corchorus olitorius HOM05D005049 ORTHO05D006032 1.1e-29 134.8 268 34.0
FAN02G4030 Fragaria x ananassa HOM05D005049 ORTHO05D006032 1.4e-29 134.4 112 53.6
FAN14G3165 Fragaria x ananassa HOM05D005049 ORTHO05D006032 2.3e-29 133.7 113 54.0
HPP92_021351 Vanilla planifolia HOM05D005049 ORTHO05D006032 8.3e-27 125.2 204 33.8
ClCG10G014210 Citrullus lanatus HOM05D005049 ORTHO05D006032 1.1e-26 124.8 140 48.6
Atru.chr6.2299 Acer truncatum HOM05D005049 ORTHO05D006032 5.1e-24 115.9 103 48.5
MCO05G513 Micromonas commoda HOM05D005049 ORTHO05D006032 6.2e-22 109.0 374 25.4
BcaB06g27754 Brassica carinata HOM05D005049 ORTHO05D006032 8.1e-22 108.6 358 27.4
Mapoly0123s0027 Marchantia polymorpha HOM05D005049 ORTHO05D006032 1.8e-21 107.5 95 53.7
C04p50070 Brassica napus HOM05D005049 ORTHO05D006032 5.8e-20 102.4 68 61.8
CBR_g12691 Chara braunii HOM05D005049 ORTHO05D006032 1.3e-19 101.3 99 43.4
BolC4t26602H Brassica oleracea HOM05D005049 ORTHO05D006032 7.1e-18 95.5 73 56.2
BcaC02g08822 Brassica carinata HOM05D005049 ORTHO05D006032 1.6e-17 94.4 73 56.2
Cre14.g612500 Chlamydomonas reinhardtii HOM05D005049 ORTHO05D006032 1.3e-16 91.3 120 40.0
C04p50080 Brassica napus HOM05D005049 ORTHO05D006032 1.7e-16 90.9 73 54.8
ECA236G0066 Erigeron canadensis HOM05D000454 ORTHO05D006032 2.3e-16 90.5 174 36.8
PRCOL_00002137 Prasinoderma coloniale HOM05D005049 ORTHO05D006032 9.6e-15 85.1 94 47.9
Hma1.2p1_0802F.1_g220350 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 2.0e-12 77.4 121 35.5
Manes.17G121440 Manihot esculenta HOM05D005049 ORTHO05D006032 8.4e-11 72.0 122 38.5
Haze_27246 Corylus avellana HOM05D005049 ORTHO05D006032 2.7e-09 67.0 91 39.6
Os01g0737800 Oryza sativa ssp. japonica HOM05D005049 ORTHO05D006032 1.9e-07 60.8 60 48.3


User provided reference genes

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