Gene: COL.COLO4_28950

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_28950
  • Transcript Identifier COL.rna27668
  • Gene Type Coding gene
  • Location AWUE01020167.1 : 112171-119139 : positive

Gene Family Information

  • ID HOM05D005049
  • #Genes/#Species 148/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna27668
  • GenBank OMO69738.1
  • id gene28922
  • gene_name COLO4_28950
  • uniprot A0A1R3HHH0

Descriptions

  • Description Prenyltransferase/squalene oxidase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042335
ISO
PLAZA Integrative Orthologycuticle development AT5G40280
GO:0018342
ISO
PLAZA Integrative Orthologyprotein prenylation AT5G40280
GO:0018343
ISO
PLAZA Homology (enrichment)protein farnesylation HOM05D005049
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G40280
GO:1990069
ISO
PLAZA Integrative Orthologystomatal opening AT5G40280
GO:0047484
ISO
PLAZA Integrative Orthologyregulation of response to osmotic stress AT5G40280
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT5G40280
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G40280
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT5G40280
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT5G40280
GO:1901000
ISO
PLAZA Integrative Orthologyregulation of response to salt stress AT5G40280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G40280
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004660
ISO
PLAZA Integrative Orthologyprotein farnesyltransferase activity AT5G40280
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008318
IEA
GOA Databaseprotein prenyltransferase activity
GO:0008318
IEA
InterProprotein prenyltransferase activity
GO:0004659
IEA
GOA Databaseprenyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005965
ISO
PLAZA Integrative Orthologyprotein farnesyltransferase complex AT5G40280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045089 Prenyltransferase subunit beta
IPR001330 PFTB repeat
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
Mapman id Description
35.1 not assigned.annotated