Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 9.4e-92 340.1 165 100.0
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 8.9e-66 253.8 134 88.8
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 3.2e-63 245.4 143 80.4
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 5.0e-61 238.0 134 81.3
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.9e-60 236.1 134 81.3
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 9.5e-60 233.8 134 79.9
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 2.1e-59 232.6 136 81.6
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 2.1e-59 232.6 136 81.6
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 6.2e-59 231.1 137 81.0
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 6.8e-58 227.6 134 79.1
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 8.9e-58 227.3 135 80.7
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 8.9e-58 227.3 134 79.9
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 1.2e-57 226.9 135 81.5
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 2.0e-57 226.1 135 78.5
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 2.0e-57 226.1 134 81.3
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 9.8e-57 223.8 135 79.3
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.3e-56 223.4 137 76.6
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 2.2e-56 222.6 134 78.4
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 8.3e-56 220.7 133 80.5
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.1e-55 220.3 145 73.8
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.4e-55 219.9 134 78.4
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.4e-55 218.0 135 77.8
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 5.4e-55 218.0 137 76.6
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 9.2e-55 217.2 136 77.9
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.2e-54 216.9 154 69.5
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 2.7e-54 215.7 136 77.9
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 3.5e-54 215.3 132 80.3
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 4.6e-54 214.9 132 76.5
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 4.6e-54 214.9 132 76.5
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 6.0e-54 214.5 122 82.8
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 7.8e-54 214.2 135 76.3
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 1.0e-53 213.8 131 76.3
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 1.0e-53 213.8 131 76.3
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.3e-53 213.4 126 79.4
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 1.7e-53 213.0 126 79.4
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-53 213.0 126 79.4
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-53 213.0 126 79.4
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-53 213.0 126 79.4
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 1.7e-53 213.0 122 82.8
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 2.3e-53 212.6 132 75.8
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 2.3e-53 212.6 105 90.5
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 2.3e-53 212.6 124 81.5
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 2.3e-53 212.6 131 77.9
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 3.0e-53 212.2 119 79.8
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 3.9e-53 211.8 128 78.1
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 3.9e-53 211.8 123 83.7
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 5.0e-53 211.5 126 78.6
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 6.6e-53 211.1 137 74.5
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 6.6e-53 211.1 128 77.3
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 1.1e-52 210.3 131 75.6
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 1.1e-52 210.3 134 73.9
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 1.5e-52 209.9 131 75.6
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 1.5e-52 209.9 131 74.8
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.5e-52 209.9 131 74.8
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 1.5e-52 209.9 127 78.7
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 1.9e-52 209.5 127 80.3
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 1.9e-52 209.5 135 74.1
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.9e-52 209.5 127 78.0
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.9e-52 209.5 135 74.8
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.9e-52 209.5 135 74.8
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 3.3e-52 208.8 132 73.5
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 3.3e-52 208.8 132 76.5
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 4.3e-52 208.4 131 74.0
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 5.6e-52 208.0 123 79.7
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 5.6e-52 208.0 127 77.2
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 5.6e-52 208.0 126 77.8
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 5.6e-52 208.0 128 75.8
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 7.3e-52 207.6 139 74.1
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 7.3e-52 207.6 123 79.7
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 9.5e-52 207.2 107 85.0
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 9.5e-52 207.2 126 77.8
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 9.5e-52 207.2 126 76.2
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 9.5e-52 207.2 126 74.6
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 1.2e-51 206.8 125 76.8
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 1.6e-51 206.5 127 76.4
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 2.1e-51 206.1 125 76.0
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 2.1e-51 206.1 127 79.5
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 2.8e-51 205.7 119 82.4
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 2.8e-51 205.7 127 79.5
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 3.6e-51 205.3 119 81.5
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 3.6e-51 205.3 119 81.5
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 3.6e-51 205.3 119 81.5
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 3.6e-51 205.3 129 79.1
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 3.6e-51 205.3 126 77.8
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 3.6e-51 205.3 103 89.3
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 4.7e-51 204.9 117 82.1
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 4.7e-51 204.9 131 73.3
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 6.2e-51 204.5 127 74.8
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 8.1e-51 204.1 126 74.6
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 8.1e-51 204.1 126 75.4
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 8.1e-51 204.1 131 74.0
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 1.4e-50 203.4 107 85.0
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 1.4e-50 203.4 123 74.0
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 2.3e-50 202.6 103 87.4
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 2.3e-50 202.6 103 87.4
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 2.6e-49 199.1 107 81.3
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 2.6e-49 199.1 126 74.6
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 1.3e-48 196.8 98 87.8
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 8.3e-48 194.1 113 76.1
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 2.4e-47 192.6 120 74.2
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 3.2e-47 192.2 141 66.7
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 3.2e-47 192.2 131 70.2
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 5.4e-47 191.4 125 72.0
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 7.1e-47 191.0 120 74.2
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 1.2e-46 190.3 147 63.9
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.6e-46 189.9 129 72.1
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.3e-45 186.8 144 66.0
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.3e-45 186.8 144 66.0
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 1.3e-45 186.8 139 63.3
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 5.1e-45 184.9 121 69.4
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 6.6e-45 184.5 139 64.7
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.1e-43 179.5 90 84.4
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.6e-43 178.7 142 66.9
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.4e-42 176.8 89 84.3
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 1.8e-42 176.4 99 81.8
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 4.0e-42 175.3 89 83.1
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 6.8e-42 174.5 146 65.1
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 1.5e-41 173.3 90 82.2
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 4.4e-41 171.8 90 90.0
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 2.9e-40 169.1 111 73.0
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 3.8e-40 168.7 133 64.7
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 4.1e-39 165.2 112 70.5
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 4.1e-39 165.2 108 73.1
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 2.1e-38 162.9 140 64.3
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 3.5e-38 162.2 114 71.1
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 3.5e-38 162.2 135 60.7
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 9.3e-31 137.5 70 90.0
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 1.3e-29 133.7 137 54.0
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 1.7e-29 133.3 64 84.4
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 9.0e-26 120.9 74 77.0
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 1.2e-22 110.5 311 28.3
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.0e-21 107.5 89 57.3
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 1.3e-19 100.5 77 71.4
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 2.1e-19 99.8 46 84.8
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 2.8e-19 99.4 49 81.6
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 1.1e-18 97.4 52 82.7
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.8e-18 96.7 50 82.0
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.3e-13 79.7 52 65.4
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 5.1e-13 78.6 50 78.0
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 4.8e-11 72.0 38 89.5
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 6.9e-10 68.2 40 67.5
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.4e-09 65.9 49 63.3
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 9.3e-07 57.8 53 49.1
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 4.6e-06 55.5 41 65.9


User provided reference genes

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