Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18760 Utricularia gibba HOM05D004227 ORTHO05D005027 6.6e-84 313.9 152 100.0
Migut.F00534 Erythranthe guttata HOM05D004227 ORTHO05D005027 2.0e-80 302.4 152 94.1
MSTRG.27225 Avicennia marina HOM05D004227 ORTHO05D005027 3.4e-80 301.6 152 94.1
SGA_v2.0_scaffold44G16581 Striga asiatica HOM05D004227 ORTHO05D005027 9.9e-80 300.1 152 94.1
Nitab4.5_0003321g0070 Nicotiana tabacum HOM05D004227 ORTHO05D005027 2.9e-79 298.5 152 93.4
Nitab4.5_0002153g0060 Nicotiana tabacum HOM05D004227 ORTHO05D005027 3.8e-79 298.1 152 94.1
Nitab4.5_0002359g0040 Nicotiana tabacum HOM05D004227 ORTHO05D005027 4.9e-79 297.7 152 93.4
Dinv43609 Davidia involucrata HOM05D004227 ORTHO05D005027 2.4e-78 295.4 149 94.0
CSS0010737 Camellia sinensis var. sinensis HOM05D004227 ORTHO05D005027 3.2e-78 295.0 148 94.6
Solyc03g093680.4 Solanum lycopersicum HOM05D004227 ORTHO05D005027 3.2e-78 295.0 152 92.8
Sopen03g024580 Solanum pennellii HOM05D004227 ORTHO05D005027 3.2e-78 295.0 152 92.8
Actinidia13618 Actinidia chinensis HOM05D004227 ORTHO05D005027 4.2e-78 294.7 148 94.6
Actinidia31661 Actinidia chinensis HOM05D004227 ORTHO05D005027 4.2e-78 294.7 148 94.6
Hma1.2p1_1508F.1_g287710 Hydrangea macrophylla HOM05D004227 ORTHO05D005027 7.1e-78 293.9 149 93.3
Nn1g00815 Nelumbo nucifera HOM05D004227 ORTHO05D005027 7.1e-78 293.9 149 92.6
TWI23G1276 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 7.1e-78 293.9 152 91.4
Duzib138G0704 Durio zibethinus HOM05D004227 ORTHO05D005027 1.2e-77 293.1 152 91.4
TWI59G0764 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 1.2e-77 293.1 152 91.4
Ciclev10022690m.g Citrus clementina HOM05D004227 ORTHO05D005027 1.6e-77 292.7 149 92.6
CsaV3_3G007250 Cucumis sativus L. HOM05D004227 ORTHO05D005027 1.6e-77 292.7 151 92.1
HPP92_014889 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.6e-77 292.7 148 92.6
HPP92_014893 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.6e-77 292.7 148 92.6
CDE06G1820 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 152 91.4
CDE06G1835 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 152 91.4
Gohir.D11G079800 Gossypium hirsutum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 152 90.8
PSO063G7112 Papaver somniferum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 148 93.2
PSO782G5116 Papaver somniferum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 148 93.2
Psat5g001800 Pisum sativum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 152 90.8
Gohir.A11G075100 Gossypium hirsutum HOM05D004227 ORTHO05D005027 2.7e-77 292.0 152 90.8
Gorai.007G085400 Gossypium raimondii HOM05D004227 ORTHO05D005027 2.7e-77 292.0 152 90.8
Lj3g0003497 Lotus japonicus HOM05D004227 ORTHO05D005027 2.7e-77 292.0 152 90.8
Lj3g0012613 Lotus japonicus HOM05D004227 ORTHO05D005027 2.7e-77 292.0 152 90.8
Gohir.A08G057900 Gossypium hirsutum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 152 90.8
Gohir.D08G067200 Gossypium hirsutum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 152 90.8
Gorai.004G069800 Gossypium raimondii HOM05D004227 ORTHO05D005027 3.5e-77 291.6 152 90.8
Sed0011885 Sechium edule HOM05D004227 ORTHO05D005027 3.5e-77 291.6 151 91.4
CAN.G460.2 Capsicum annuum HOM05D004227 ORTHO05D005027 4.6e-77 291.2 152 91.4
Medtr3g118110 Medicago truncatula HOM05D004227 ORTHO05D005027 4.6e-77 291.2 152 90.1
TPR.G38529 Trifolium pratense HOM05D004227 ORTHO05D005027 4.6e-77 291.2 152 90.1
arahy.Tifrunner.gnm1.ann1.CPA9TZ Arachis hypogaea HOM05D004227 ORTHO05D005027 6.0e-77 290.8 152 90.1
arahy.Tifrunner.gnm1.ann1.RC63K2 Arachis hypogaea HOM05D004227 ORTHO05D005027 6.0e-77 290.8 152 90.1
Phvul.010G046900 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 6.0e-77 290.8 152 90.1
Rhsim03G0159900 Rhododendron simsii HOM05D004227 ORTHO05D005027 6.0e-77 290.8 152 91.4
Thecc.01G396100 Theobroma cacao HOM05D004227 ORTHO05D005027 6.0e-77 290.8 152 90.1
CANSAT25G0195 Cannabis sativa HOM05D004227 ORTHO05D005027 7.9e-77 290.4 152 90.1
Dinv44054 Davidia involucrata HOM05D004227 ORTHO05D005027 7.9e-77 290.4 148 91.9
Duzib133G0083 Durio zibethinus HOM05D004227 ORTHO05D005027 7.9e-77 290.4 152 90.1
ECA232G0872 Erigeron canadensis HOM05D004227 ORTHO05D005027 7.9e-77 290.4 149 93.3
HanXRQChr09g0252831 Helianthus annuus HOM05D004227 ORTHO05D005027 1.0e-76 290.0 144 95.8
Lsat_1_v5_gn_0_10121 Lactuca sativa HOM05D004227 ORTHO05D005027 1.0e-76 290.0 144 95.8
MD07G1109700 Malus domestica HOM05D004227 ORTHO05D005027 1.0e-76 290.0 152 90.1
Cpa.g.sc22.26 Carica papaya HOM05D004227 ORTHO05D005027 1.3e-76 289.7 152 90.1
Hund24961 Selenicereus undatus HOM05D004227 ORTHO05D005027 1.3e-76 289.7 152 91.4
VMungo0331G1366 Vigna mungo HOM05D004227 ORTHO05D005027 1.3e-76 289.7 152 89.5
Ca_15636_v3 Cicer arietinum L. HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
FAN01G2506 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
FAN03G2167 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
FAN06G3355 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
FAN10G0507 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
FAN10G0749 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
Glyma.03G109200 Glycine max HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
Glyma.07G115700 Glycine max HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
RcHm_v2.0_Chr1g0348061 Rosa chinensis HOM05D004227 ORTHO05D005027 1.8e-76 289.3 152 89.5
Prupe.2G133100 Prunus persica HOM05D004227 ORTHO05D005027 2.3e-76 288.9 152 89.5
PGR004G2481 Punica granatum HOM05D004227 ORTHO05D005027 2.3e-76 288.9 151 91.4
TAR636G2330 Trochodendron aralioides HOM05D004227 ORTHO05D005027 2.3e-76 288.9 149 90.6
FAN06G2246 Fragaria x ananassa HOM05D004227 ORTHO05D005027 3.9e-76 288.1 152 88.8
HanXRQChr15g0493591 Helianthus annuus HOM05D004227 ORTHO05D005027 3.9e-76 288.1 144 95.1
Manes.05G055700 Manihot esculenta HOM05D004227 ORTHO05D005027 5.1e-76 287.7 152 90.1
PGR004G2111 Punica granatum HOM05D004227 ORTHO05D005027 5.1e-76 287.7 148 91.9
Lalb_Chr06g0171081 Lupinus albus HOM05D004227 ORTHO05D005027 1.9e-75 285.8 153 90.2
Potri.014G049700 Populus trichocarpa HOM05D004227 ORTHO05D005027 1.9e-75 285.8 148 89.9
Eucgr.D01223 Eucalyptus grandis HOM05D004227 ORTHO05D005027 3.3e-75 285.0 148 89.9
Glyma.15G097500 Glycine max HOM05D004227 ORTHO05D005027 3.3e-75 285.0 152 88.2
Phvul.006G161800 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 4.3e-75 284.6 152 88.2
THA.LOC104801496 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 4.3e-75 284.6 152 89.5
EL10Ac6g14165 Beta vulgaris HOM05D004227 ORTHO05D005027 5.6e-75 284.3 152 88.8
COL.COLO4_12397 Corchorus olitorius HOM05D004227 ORTHO05D005027 5.6e-75 284.3 152 88.8
SEGI_27062 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 5.6e-75 284.3 148 91.2
COL.COLO4_14773 Corchorus olitorius HOM05D004227 ORTHO05D005027 7.4e-75 283.9 152 88.8
Potri.002G138500 Populus trichocarpa HOM05D004227 ORTHO05D005027 7.4e-75 283.9 147 89.8
Ah.01g017970 Amaranthus hybridus HOM05D004227 ORTHO05D005027 1.3e-74 283.1 153 88.2
AUR62014174 Chenopodium quinoa HOM05D004227 ORTHO05D005027 1.6e-74 282.7 148 90.5
SEGI_06195 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 1.6e-74 282.7 148 90.5
THA.LOC104816996 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 1.6e-74 282.7 144 93.1
Aqoxy3G01907 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.8e-74 282.0 152 88.2
AagrBONN_evm.TU.Sc2ySwM_344.2698 Anthoceros agrestis HOM05D004227 ORTHO05D005027 3.7e-74 281.6 148 89.9
Pp3c1_16440 Physcomitrium patens HOM05D004227 ORTHO05D005027 4.8e-74 281.2 148 89.2
Pp3c2_21720 Physcomitrium patens HOM05D004227 ORTHO05D005027 4.8e-74 281.2 148 89.2
Aqoxy91s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 6.2e-74 280.8 152 88.2
Mapoly0032s0045 Marchantia polymorpha HOM05D004227 ORTHO05D005027 6.2e-74 280.8 148 89.9
BcaC07g42337 Brassica carinata HOM05D004227 ORTHO05D005027 1.1e-73 280.0 152 87.5
Os12g0287200 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 1.1e-73 280.0 143 92.3
Zm00001eb174310 Zea mays HOM05D004227 ORTHO05D005027 6.9e-73 277.3 148 87.2
BcaC07g42439 Brassica carinata HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 88.5
A10p00100 Brassica napus HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 88.5
BolC8t52927H Brassica oleracea HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 88.5
BraA10t42288Z Brassica rapa HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 88.5
Os08g0107900 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 1.2e-72 276.6 149 87.9
AL1G10090 Arabidopsis lyrata HOM05D004227 ORTHO05D005027 3.4e-72 275.0 148 87.2
Carub.0001s0001 Capsella rubella HOM05D004227 ORTHO05D005027 4.5e-72 274.6 149 87.2
Thhalv10009013m.g Eutrema salsugineum HOM05D004227 ORTHO05D005027 5.8e-72 274.2 148 86.5
BcaB03g13634 Brassica carinata HOM05D004227 ORTHO05D005027 7.6e-72 273.9 148 87.8
C05p00070 Brassica napus HOM05D004227 ORTHO05D005027 7.6e-72 273.9 148 87.8
Cfa009863 Carpinus fangiana HOM05D004227 ORTHO05D005027 1.3e-71 273.1 151 84.8
CARHR000190 Cardamine hirsuta HOM05D004227 ORTHO05D005027 2.2e-71 272.3 152 86.2
AT1G02140 Arabidopsis thaliana HOM05D004227 ORTHO05D005027 2.9e-71 271.9 148 85.8
QL04p029953 Quercus lobata HOM05D004227 ORTHO05D005027 6.5e-71 270.8 147 85.7
QL07p006029 Quercus lobata HOM05D004227 ORTHO05D005027 6.5e-71 270.8 147 85.7
Rhsim13G0168500 Rhododendron simsii HOM05D004227 ORTHO05D005027 1.1e-70 270.0 147 88.4
BolC5t28794H Brassica oleracea HOM05D004227 ORTHO05D005027 1.2e-69 266.5 156 83.3
CiPaw.14G019900 Carya illinoinensis HOM05D004227 ORTHO05D005027 1.2e-69 266.5 144 85.4
Lalb_Chr01g0012541 Lupinus albus HOM05D004227 ORTHO05D005027 2.7e-69 265.4 140 89.3
Zm00001eb260270 Zea mays HOM05D004227 ORTHO05D005027 2.7e-69 265.4 143 88.1
SalBow3G0312 Salvia bowleyana HOM05D004227 ORTHO05D005027 3.0e-68 261.9 134 92.5
unitig_37.g12485 Utricularia gibba HOM05D004227 ORTHO05D005027 3.0e-68 261.9 134 94.0
Nitab4.5_0004457g0020 Nicotiana tabacum HOM05D004227 ORTHO05D005027 3.9e-68 261.5 134 93.3
SalBow3G4020 Salvia bowleyana HOM05D004227 ORTHO05D005027 3.9e-68 261.5 132 93.2
Oeu046442.1 Olea europaea HOM05D004227 ORTHO05D005027 8.7e-68 260.4 132 91.7
PGSC0003DMG400021002 Solanum tuberosum HOM05D004227 ORTHO05D005027 1.1e-67 260.0 130 94.6
Oeu030870.1 Olea europaea HOM05D004227 ORTHO05D005027 1.5e-67 259.6 132 92.4
Lj7A548G44 Lonicera japonica HOM05D004227 ORTHO05D005027 7.4e-67 257.3 131 92.4
Peaxi162Scf01305g00032 Petunia axillaris HOM05D004227 ORTHO05D005027 1.6e-66 256.1 132 91.7
ClCG05G000140 Citrullus lanatus HOM05D004227 ORTHO05D005027 2.1e-66 255.8 131 91.6
MELO3C005946.2 Cucumis melo HOM05D004227 ORTHO05D005027 2.1e-66 255.8 131 91.6
MBI19_g27175_MAGBIO Magnolia biondii HOM05D004227 ORTHO05D005027 4.8e-66 254.6 132 89.4
Sp1g00120 Schrenkiella parvula HOM05D004227 ORTHO05D005027 4.8e-66 254.6 135 88.1
FvH4_7g10360 Fragaria vesca HOM05D004227 ORTHO05D005027 8.2e-66 253.8 146 82.2
Lj9A555T36 Lonicera japonica HOM05D004227 ORTHO05D005027 1.1e-65 253.4 129 91.5
SGA_v2.0_scaffold60G20835 Striga asiatica HOM05D004227 ORTHO05D005027 1.8e-65 252.7 144 84.7
TAR629G1537 Trochodendron aralioides HOM05D004227 ORTHO05D005027 1.8e-65 252.7 129 89.9
vmacro05443 Vaccinium macrocarpon HOM05D004227 ORTHO05D005027 2.4e-65 252.3 129 93.0
Sc24g0004090 Simmondsia chinensis HOM05D004227 ORTHO05D005027 6.9e-65 250.8 129 90.7
Atru.chr2.217 Acer truncatum HOM05D004227 ORTHO05D005027 1.2e-64 250.0 132 89.4
Aa31LG1G11540 Aethionema arabicum HOM05D004227 ORTHO05D005027 2.6e-64 248.8 148 80.4
AUR62039531 Chenopodium quinoa HOM05D004227 ORTHO05D005027 4.5e-64 248.1 139 84.9
A09p69360 Brassica napus HOM05D004227 ORTHO05D005027 2.2e-63 245.7 150 79.3
BraA09t42281Z Brassica rapa HOM05D004227 ORTHO05D005027 2.2e-63 245.7 150 79.3
Aqoxy109s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.9e-63 245.4 135 85.2
Aqoxy3G01910 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 3.8e-63 245.0 132 87.1
Sabra02G0107500 Salix brachista HOM05D004227 ORTHO05D005027 3.8e-63 245.0 132 85.6
Peaxi162Scf00304g01023 Petunia axillaris HOM05D004227 ORTHO05D005027 8.5e-63 243.8 152 79.6
MCO04G284 Micromonas commoda HOM05D004227 ORTHO05D005027 6.1e-61 237.7 144 75.7
Cre09.g392692 Chlamydomonas reinhardtii HOM05D004227 ORTHO05D005027 2.3e-60 235.7 143 74.1
Medtr3g109260 Medicago truncatula HOM05D004227 ORTHO05D005027 2.8e-58 228.8 151 72.2
ATR0090G010 Amborella trichopoda HOM05D004227 ORTHO05D005027 5.3e-57 224.6 157 72.0
Haze_23235 Corylus avellana HOM05D004227 ORTHO05D005027 1.0e-52 210.3 187 58.3
Pp3c1_16390 Physcomitrium patens HOM05D004227 ORTHO05D005027 5.7e-51 204.5 144 71.5
SHI13620 Sapria himalayana HOM05D004227 ORTHO05D005027 5.7e-51 204.5 143 69.9
CiPaw.13G025400 Carya illinoinensis HOM05D004227 ORTHO05D005027 1.3e-50 203.4 116 81.9
Lsat_1_v5_gn_2_127120 Lactuca sativa HOM05D004227 ORTHO05D005027 2.4e-49 199.1 103 92.2
GSVIVG01013876001 Vitis vinifera HOM05D004227 ORTHO05D005027 9.1e-49 197.2 103 91.3
Cc02_g04830 Coffea canephora HOM05D004227 ORTHO05D005027 2.6e-48 195.7 103 90.3
Haze_27249 Corylus avellana HOM05D004227 ORTHO05D005027 1.1e-46 190.3 116 75.0
CDE06G1723 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 3.3e-43 178.7 87 94.3
C08p54180 Brassica napus HOM05D004227 ORTHO05D005027 3.5e-40 168.7 115 75.7
Atru.chr5.117 Acer truncatum HOM05D004227 ORTHO05D005027 5.5e-38 161.4 80 90.0
VMungo0540G1169 Vigna mungo HOM05D004227 ORTHO05D005027 9.4e-38 160.6 87 81.6
CBR_g19771 Chara braunii HOM05D004227 ORTHO05D005027 1.8e-36 156.4 81 92.6
HPP92_020677 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.2e-35 153.7 130 62.3
Rhsim13G0168700 Rhododendron simsii HOM05D004227 ORTHO05D005027 1.2e-32 143.7 73 94.5
MD00G1129300 Malus domestica HOM05D004227 ORTHO05D005027 2.9e-31 139.0 74 83.8
Aqoxy3G01908 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 8.8e-28 127.5 71 84.5
Aqoxy91s002 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 3.4e-27 125.6 71 84.5
Aqoxy3G01911 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 1.7e-26 123.2 71 83.1
Actinidia01038 Actinidia chinensis HOM05D004227 ORTHO05D005027 3.1e-25 119.0 77 75.3
Sed0011381 Sechium edule HOM05D004227 ORTHO05D373379 1.7e-15 86.7 45 91.1
Aqoxy109s002 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 1.5e-14 83.6 46 84.8
Haze_23858 Corylus avellana HOM05D004227 ORTHO05D034883 4.0e-12 75.5 74 54.1


User provided reference genes

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