Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 7.6e-258 893.3 435 100.0
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 1.5e-72 277.7 201 64.7
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.5e-72 277.7 201 65.7
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.3e-71 274.6 201 64.2
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 2.2e-71 273.9 203 63.5
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 3.7e-71 273.1 201 64.7
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 3.7e-71 273.1 201 64.7
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 1.1e-70 271.6 203 63.5
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 1.8e-70 270.8 208 62.0
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 2.4e-70 270.4 201 64.2
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 3.2e-70 270.0 201 63.7
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 5.4e-70 269.2 201 63.2
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 7.0e-70 268.9 201 63.2
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 7.0e-70 268.9 201 63.2
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.2e-69 268.1 205 62.0
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 1.2e-69 268.1 201 63.2
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.6e-69 267.7 201 62.7
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 2.0e-69 267.3 201 62.2
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 2.7e-69 266.9 201 63.2
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 7.8e-69 265.4 201 62.7
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 1.0e-68 265.0 201 61.7
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.3e-68 264.6 198 63.6
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.7e-68 264.2 200 64.5
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 3.9e-68 263.1 201 62.7
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 6.6e-68 262.3 201 61.2
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 8.6e-68 261.9 201 61.2
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 1.1e-67 261.5 201 61.7
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.5e-67 261.2 201 60.7
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.9e-67 260.8 200 62.5
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 2.5e-67 260.4 200 61.5
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 4.3e-67 259.6 200 63.0
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.6e-67 259.2 201 61.7
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.3e-67 258.8 201 61.7
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 1.2e-66 258.1 201 61.2
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.6e-66 257.7 273 51.3
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 2.8e-66 256.9 203 61.6
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.8e-66 256.9 201 59.2
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.8e-66 256.9 204 58.8
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 2.8e-66 256.9 201 60.2
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 4.7e-66 256.1 201 59.7
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.0e-65 255.0 201 61.7
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.8e-65 254.2 182 67.6
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 2.3e-65 253.8 201 58.7
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 2.3e-65 253.8 200 61.0
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 3.1e-65 253.4 203 60.6
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 3.1e-65 253.4 232 56.9
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 3.1e-65 253.4 222 56.3
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 4.0e-65 253.1 201 59.7
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 5.2e-65 252.7 452 39.6
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 6.8e-65 252.3 200 61.0
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 1.2e-64 251.5 201 61.2
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 1.5e-64 251.1 204 60.3
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 3.4e-64 250.0 201 59.2
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.4e-64 250.0 200 60.0
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 4.4e-64 249.6 201 61.7
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 4.4e-64 249.6 200 61.5
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 5.8e-64 249.2 203 58.6
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 7.5e-64 248.8 203 58.6
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 9.8e-64 248.4 203 58.1
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 9.8e-64 248.4 203 58.1
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 4.9e-63 246.1 203 57.6
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 4.9e-63 246.1 203 57.6
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 6.4e-63 245.7 200 59.5
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 6.4e-63 245.7 201 59.2
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 6.4e-63 245.7 201 60.2
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 1.4e-62 244.6 201 59.7
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 1.9e-62 244.2 206 58.3
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 5.4e-62 242.7 202 59.4
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 3.5e-61 240.0 201 58.2
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 4.6e-61 239.6 182 62.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 4.6e-61 239.6 144 74.3
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 7.8e-61 238.8 203 57.6
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.5e-59 234.6 201 57.7
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 3.3e-59 233.4 242 49.6
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 9.5e-59 231.9 183 60.1
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 1.2e-58 231.5 201 57.2
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 2.1e-58 230.7 201 56.2
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.1e-58 230.7 142 73.9
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.8e-58 230.3 151 71.5
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 2.8e-58 230.3 218 57.3
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 3.6e-58 229.9 201 56.7
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 8.1e-58 228.8 184 60.9
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 3.1e-57 226.9 184 58.2
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 1.2e-56 224.9 242 48.3
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 1.2e-56 224.9 182 60.4
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 3.4e-56 223.4 184 60.9
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 1.3e-55 221.5 184 60.3
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.2e-55 220.7 182 58.8
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 2.9e-55 220.3 234 53.8
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.1e-54 218.4 184 59.2
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 4.1e-54 216.5 184 58.7
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 1.2e-53 214.9 184 58.2
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.6e-50 203.4 202 47.5
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.6e-50 203.4 202 47.5
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.7e-50 203.0 202 47.5
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 3.1e-49 200.3 122 72.1
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 1.6e-42 177.9 202 46.5
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 8.4e-39 165.6 96 74.0
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 1.4e-38 164.9 148 56.1
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.1e-37 161.0 98 76.5
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 4.3e-35 153.3 97 71.1
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 4.9e-31 139.8 96 67.7
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 7.9e-29 132.5 77 71.4
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.3e-28 131.7 97 58.8
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.3e-28 131.7 77 72.7
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 3.0e-28 130.6 202 35.1
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 4.9e-23 113.2 107 54.2
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 1.9e-22 111.3 184 40.2
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.3e-20 105.1 101 55.4
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.0e-20 104.0 101 51.5
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 2.1e-18 97.8 121 38.8
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.6e-16 90.9 77 53.2
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 6.5e-15 86.3 49 71.4
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 2.5e-14 84.3 51 72.5
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 1.3e-12 78.6 152 30.9
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 2.5e-11 74.3 175 30.3


User provided reference genes

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