Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g17980 Utricularia gibba HOM05D006573 ORTHO05D008073 5.4e-164 580.9 282 100.0
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 1.0e-98 364.0 243 72.4
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 2.3e-98 362.8 228 75.0
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 1.1e-97 360.5 193 84.5
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 2.0e-97 359.8 240 72.1
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 9.7e-97 357.5 209 78.9
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 1.3e-96 357.1 196 81.6
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 2.8e-96 355.9 240 70.8
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 2.8e-96 355.9 232 74.6
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 1.8e-95 353.2 240 70.0
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.8e-95 353.2 240 70.0
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 2.4e-95 352.8 240 70.4
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 2.4e-95 352.8 240 70.4
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 3.1e-95 352.4 240 70.0
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 5.3e-95 351.7 190 82.6
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 5.3e-95 351.7 258 67.4
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 7.0e-95 351.3 228 73.2
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 7.0e-95 351.3 193 82.4
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 9.1e-95 350.9 207 76.8
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 1.6e-94 350.1 187 84.0
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 2.0e-94 349.7 228 72.8
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 2.6e-94 349.4 201 80.6
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 2.6e-94 349.4 193 80.3
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 3.5e-94 349.0 194 80.9
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 3.5e-94 349.0 224 73.2
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 4.5e-94 348.6 204 78.4
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 7.7e-94 347.8 250 66.8
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 7.7e-94 347.8 193 79.8
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 7.7e-94 347.8 236 71.2
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 7.7e-94 347.8 194 81.4
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 1.0e-93 347.4 204 78.4
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 1.3e-93 347.1 228 72.8
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 1.3e-93 347.1 239 70.3
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 1.3e-93 347.1 239 70.3
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 1.3e-93 347.1 193 79.8
CDE05G0621 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.7e-93 346.7 188 83.0
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 1.7e-93 346.7 300 59.3
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 2.2e-93 346.3 265 63.4
ClCG11G010060 Citrullus lanatus HOM05D006573 ORTHO05D008073 3.8e-93 345.5 207 74.9
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 5.0e-93 345.1 194 80.4
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 5.0e-93 345.1 193 79.3
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 6.5e-93 344.7 194 80.9
CsaV3_2G010250 Cucumis sativus L. HOM05D006573 ORTHO05D008073 6.5e-93 344.7 217 72.4
TWI34G1215 Tripterygium wilfordii HOM05D006573 ORTHO05D008073 6.5e-93 344.7 235 70.6
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 8.5e-93 344.4 237 69.6
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 8.5e-93 344.4 191 81.7
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 8.5e-93 344.4 189 81.0
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 1.1e-92 344.0 247 68.4
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.1e-92 344.0 194 79.9
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 1.5e-92 343.6 237 69.2
MELO3C008677.2 Cucumis melo HOM05D006573 ORTHO05D008073 1.5e-92 343.6 217 71.9
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 1.5e-92 343.6 196 79.1
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 1.9e-92 343.2 238 68.5
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 1.9e-92 343.2 196 79.6
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 2.5e-92 342.8 274 64.2
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 2.5e-92 342.8 224 71.9
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 3.2e-92 342.4 189 80.4
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 3.2e-92 342.4 206 75.7
Sed0012720 Sechium edule HOM05D006573 ORTHO05D008073 5.5e-92 341.7 196 76.5
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 7.2e-92 341.3 203 75.4
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 9.4e-92 340.9 232 69.8
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 9.4e-92 340.9 266 61.3
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 9.4e-92 340.9 238 68.1
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 9.4e-92 340.9 193 79.3
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 9.4e-92 340.9 217 70.5
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 1.2e-91 340.5 196 77.0
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 1.2e-91 340.5 194 78.9
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 1.6e-91 340.1 194 78.9
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 2.1e-91 339.7 188 81.4
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 2.1e-91 339.7 238 66.8
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 2.1e-91 339.7 194 78.4
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 3.6e-91 339.0 225 68.9
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 3.6e-91 339.0 196 78.1
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 3.6e-91 339.0 187 81.3
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 3.6e-91 339.0 195 79.5
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 4.7e-91 338.6 194 78.4
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 8.0e-91 337.8 247 67.2
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 8.0e-91 337.8 193 76.7
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 1.0e-90 337.4 194 78.9
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 1.0e-90 337.4 197 76.1
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 1.8e-90 336.7 197 75.6
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 2.3e-90 336.3 194 76.3
Hund07152 Selenicereus undatus HOM05D006573 ORTHO05D008073 2.3e-90 336.3 196 77.0
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 2.3e-90 336.3 188 79.3
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 3.0e-90 335.9 229 70.7
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 5.2e-90 335.1 239 67.8
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 1.2e-89 334.0 215 73.5
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 1.5e-89 333.6 215 73.5
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 2.0e-89 333.2 236 68.6
Hma1.2p1_0123F.1_g058020 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 2.6e-89 332.8 185 81.1
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 2.6e-89 332.8 203 75.9
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 3.4e-89 332.4 199 75.9
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 3.4e-89 332.4 198 77.3
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 1.3e-88 330.5 194 77.3
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 2.8e-88 329.3 193 75.6
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 4.1e-87 325.5 179 82.7
COL.COLO4_20557 Corchorus olitorius HOM05D006573 ORTHO05D008073 1.5e-84 317.0 169 82.8
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 6.1e-83 311.6 204 70.1
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 8.8e-82 307.8 237 65.0
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 8.8e-82 307.8 211 67.8
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 2.4e-79 299.7 193 73.6
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 4.1e-79 298.9 208 64.4
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 4.5e-78 295.4 185 71.9
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 1.7e-77 293.5 183 73.2
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 9.8e-73 277.7 195 68.7
SMO270G0104 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 3.7e-72 275.8 165 74.5
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 3.2e-71 272.7 187 63.6
SEGI_19143 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 1.6e-70 270.4 184 65.2
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 8.9e-66 254.6 216 59.7
PGSC0003DMG400010690 Solanum tuberosum HOM05D006573 ORTHO05D008073 4.9e-56 222.2 136 70.6
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 7.1e-47 191.8 211 43.1
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 2.1e-43 180.3 201 43.3
PGSC0003DMG400020993 Solanum tuberosum HOM05D006573 ORTHO05D008073 1.9e-39 167.2 105 72.4
SMO334G0031 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.5e-36 157.5 114 57.0
SMO297G0027 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.5e-36 156.8 114 57.0
SMO270G0143 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 9.6e-36 154.8 114 56.1
SMO297G0014 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 9.6e-36 154.8 114 57.0
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 9.3e-31 138.3 74 75.7
SMO266G0012 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.5e-25 120.9 78 65.4
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 3.8e-08 63.2 160 25.0
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 5.0e-08 62.8 133 25.6
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 6.5e-08 62.4 205 23.4
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 8.4e-08 62.0 131 26.7
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 1.4e-07 61.2 160 25.0
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 1.4e-07 61.2 177 23.2
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.4e-07 61.2 209 21.5
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 2.5e-07 60.5 179 24.0
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 3.2e-07 60.1 133 24.8
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 2.7e-06 57.0 194 21.6
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 3.5e-06 56.6 135 23.7


User provided reference genes

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