Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 9.0e-105 383.6 200 100.0
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 2.3e-52 209.5 193 58.5
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 1.2e-51 207.2 195 60.0
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 1.1e-49 200.7 193 57.0
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 3.5e-48 195.7 198 56.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 6.5e-47 191.4 193 56.5
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 7.2e-46 188.0 191 56.5
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 1.0e-44 184.1 188 53.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 4.0e-44 182.2 193 56.0
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 8.9e-44 181.0 180 56.1
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.0e-43 179.9 172 58.1
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 3.4e-43 179.1 200 52.0
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 3.4e-43 179.1 170 58.2
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 3.4e-43 179.1 191 52.9
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 3.4e-43 179.1 201 50.7
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 4.4e-43 178.7 164 57.3
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 5.7e-43 178.3 193 51.8
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 1.7e-42 176.8 209 47.4
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 1.7e-42 176.8 166 59.0
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 2.2e-42 176.4 186 54.3
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 2.8e-42 176.0 194 53.1
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 2.8e-42 176.0 191 52.4
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 4.9e-42 175.3 163 57.1
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 4.9e-42 175.3 152 59.9
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 6.3e-42 174.9 158 58.2
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 6.3e-42 174.9 158 58.9
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 6.3e-42 174.9 210 48.1
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.3e-42 174.5 208 50.5
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 8.3e-42 174.5 195 51.8
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 8.3e-42 174.5 150 61.3
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 8.3e-42 174.5 210 48.1
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 1.1e-41 174.1 148 60.8
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 1.1e-41 174.1 159 56.0
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 1.4e-41 173.7 183 53.6
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 1.8e-41 173.3 158 56.3
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 1.8e-41 173.3 155 59.4
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 1.8e-41 173.3 165 57.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 2.4e-41 172.9 155 58.7
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 3.1e-41 172.6 174 55.2
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 4.1e-41 172.2 158 55.7
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 4.1e-41 172.2 180 53.9
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 5.4e-41 171.8 174 55.2
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 5.4e-41 171.8 157 56.7
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 7.0e-41 171.4 180 53.9
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 9.2e-41 171.0 154 58.4
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.2e-40 170.6 171 53.2
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 4.5e-40 168.7 185 53.5
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 4.5e-40 168.7 187 52.9
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 4.5e-40 168.7 150 59.3
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 4.5e-40 168.7 151 59.6
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 5.9e-40 168.3 193 51.3
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 7.8e-40 167.9 178 52.8
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 1.3e-39 167.2 150 58.7
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.7e-39 166.8 192 49.5
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 2.3e-39 166.4 152 59.2
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 2.3e-39 166.4 147 60.5
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 2.9e-39 166.0 153 57.5
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 5.0e-39 165.2 151 58.9
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 8.6e-39 164.5 155 57.4
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 1.1e-38 164.1 158 55.7
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.1e-38 164.1 158 55.7
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 4.3e-38 162.2 188 50.0
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 5.6e-38 161.8 158 55.1
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 7.3e-38 161.4 187 50.8
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 1.6e-37 160.2 148 57.4
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 1.6e-37 160.2 177 51.4
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.8e-37 159.5 168 53.0
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 6.1e-37 158.3 153 56.2
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.3e-36 156.4 193 49.2
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 2.3e-36 156.4 153 56.9
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 2.3e-36 156.4 196 49.0
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 3.0e-36 156.0 154 55.8
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 6.8e-36 154.8 179 49.7
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 8.9e-36 154.5 107 67.3
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 8.9e-36 154.5 189 48.7
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 9.2e-33 144.4 103 65.0
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 6.0e-32 141.7 125 56.8
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 3.6e-29 132.5 93 65.6
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.6e-27 126.3 155 45.8
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 3.7e-26 122.5 152 44.7
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.4e-25 120.6 157 47.8
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 4.0e-20 102.4 152 44.7
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 5.4e-17 92.0 181 33.7
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 1.1e-14 84.3 69 62.3
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 7.8e-08 61.6 73 46.6
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 2.5e-06 56.6 45 64.4


User provided reference genes

Program Settings