Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12520 Utricularia gibba HOM05D000123 ORTHO05D000064 3.9e-99 364.8 181 100.0
unitig_46.g18779 Utricularia gibba HOM05D000123 ORTHO05D000064 9.2e-32 141.0 107 70.1
Migut.F00357 Erythranthe guttata HOM05D000123 ORTHO05D000064 2.0e-18 96.7 122 50.8
Oeu022578.1 Olea europaea HOM05D000123 ORTHO05D000064 6.6e-14 81.6 119 42.9
DCAR_014591 Daucus carota HOM05D006829 ORTHO05D000064 1.1e-13 80.9 104 42.3
Cc00_g28360 Coffea canephora HOM05D000123 ORTHO05D000064 8.1e-12 74.7 115 45.2
ECA247G0022 Erigeron canadensis HOM05D000123 ORTHO05D000064 2.4e-11 73.2 133 37.6
MSTRG.8750 Avicennia marina HOM05D000123 ORTHO05D000064 4.0e-11 72.4 106 45.3
Oeu056236.1 Olea europaea HOM05D000123 ORTHO05D000064 4.0e-11 72.4 117 42.7
HanXRQChr14g0462241 Helianthus annuus HOM05D000123 ORTHO05D000064 8.9e-11 71.2 114 42.1
Hma1.2p1_1323F.1_g275580 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 2.6e-10 69.7 115 42.6
Dinv35198 Davidia involucrata HOM05D000123 ORTHO05D000064 4.4e-10 68.9 115 43.5
MSTRG.27126 Avicennia marina HOM05D000123 ORTHO05D000064 1.3e-09 67.4 85 51.8
Oeu062764.1 Olea europaea HOM05D000123 ORTHO05D000064 2.2e-09 66.6 117 40.2
Nitab4.5_0001508g0070 Nicotiana tabacum HOM05D000123 ORTHO05D000064 3.8e-09 65.9 112 42.0
Phvul.004G119600 Phaseolus vulgaris HOM05D000123 ORTHO05D000064 6.4e-09 65.1 130 37.7
Nitab4.5_0000716g0250 Nicotiana tabacum HOM05D000123 ORTHO05D000064 8.4e-09 64.7 112 40.2
Glyma.09G143200 Glycine max HOM05D000123 ORTHO05D000064 1.1e-08 64.3 100 44.0
vmacro06701 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 2.4e-08 63.2 93 45.2
Glyma.16G196200 Glycine max HOM05D000123 ORTHO05D000064 4.2e-08 62.4 100 45.0
Peaxi162Scf00915g00029 Petunia axillaris HOM05D000123 ORTHO05D000064 5.4e-08 62.0 115 38.3
PGSC0003DMG400014323 Solanum tuberosum HOM05D000123 ORTHO05D000064 9.3e-08 61.2 112 42.9
TWI23G0056 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 9.3e-08 61.2 112 41.1
Aqoxy7G00399 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 1.2e-07 60.8 99 43.4
Sopen03g004850 Solanum pennellii HOM05D000123 ORTHO05D000064 1.2e-07 60.8 112 39.3
Cfa008300 Carpinus fangiana HOM05D000123 ORTHO05D000064 1.6e-07 60.5 112 39.3
Rhsim03G0178900 Rhododendron simsii HOM05D000123 ORTHO05D000064 1.6e-07 60.5 112 40.2
Solyc03g026020.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 1.6e-07 60.5 112 39.3
TAR629G2276 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.6e-07 60.5 92 48.9
DCAR_018186 Daucus carota HOM05D000123 ORTHO05D000064 2.1e-07 60.1 125 34.4
SalBow4G0141 Salvia bowleyana HOM05D000123 ORTHO05D000064 2.1e-07 60.1 109 40.4
SalBow4G1379 Salvia bowleyana HOM05D000123 ORTHO05D000064 2.1e-07 60.1 109 40.4
SGA_v2.0_scaffold2G01067 Striga asiatica HOM05D000123 ORTHO05D000064 2.1e-07 60.1 63 50.8
Thecc.03G173000 Theobroma cacao HOM05D000123 ORTHO05D000064 2.1e-07 60.1 123 38.2
CSS0006648 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.7e-07 59.7 92 40.2
CiPaw.03G104300 Carya illinoinensis HOM05D000123 ORTHO05D000064 3.5e-07 59.3 112 40.2
CAN.G856.2 Capsicum annuum HOM05D000123 ORTHO05D000064 6.0e-07 58.5 112 40.2
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 7.8e-07 58.2 109 38.5
Ca_22961_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 7.8e-07 58.2 117 40.2
Ca_29901_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 7.8e-07 58.2 117 40.2
MD07G1266500 Malus domestica HOM05D000123 ORTHO05D000064 7.8e-07 58.2 111 38.7
Nn6g34203 Nelumbo nucifera HOM05D000123 ORTHO05D000064 7.8e-07 58.2 92 39.1
Duzib084G0677 Durio zibethinus HOM05D000123 ORTHO05D000064 1.3e-06 57.4 114 43.0
Duzib205G1084 Durio zibethinus HOM05D000123 ORTHO05D000064 1.3e-06 57.4 114 41.2
Medtr0020s0020 Medicago truncatula HOM05D000123 ORTHO05D000064 1.3e-06 57.4 133 34.6
CSS0026973 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.3e-06 56.6 99 41.4
CSS0037241 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.3e-06 56.6 99 41.4
HanXRQChr13g0395681 Helianthus annuus HOM05D000123 ORTHO05D000064 2.3e-06 56.6 127 35.4
Hund11758 Selenicereus undatus HOM05D000123 ORTHO05D000064 2.3e-06 56.6 109 35.8
Hund28784 Selenicereus undatus HOM05D000123 ORTHO05D000064 2.3e-06 56.6 109 35.8
Aa31LG11G1510 Aethionema arabicum HOM05D000123 ORTHO05D000064 3.9e-06 55.8 97 38.1
Haze_13731 Corylus avellana HOM05D000123 ORTHO05D000064 3.9e-06 55.8 116 38.8
Lj2g0014984 Lotus japonicus HOM05D000123 ORTHO05D000064 5.1e-06 55.5 96 42.7
arahy.Tifrunner.gnm1.ann1.L21EJT Arachis hypogaea HOM05D000123 ORTHO05D000064 6.6e-06 55.1 101 41.6
Hund04724 Selenicereus undatus HOM05D000123 ORTHO05D000064 8.7e-06 54.7 105 38.1
VMungo0464G1825 Vigna mungo HOM05D000123 ORTHO05D000064 8.7e-06 54.7 122 35.2


User provided reference genes

Program Settings