Gene: Sopen03g004850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g004850
  • Transcript Identifier Sopen03g004850.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 3623275-3624399 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g004850.1

Descriptions

  • Description member of Heat Stress Transcription Factor (Hsf) family | AT-HSFB2B | FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to chitin | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Heat shock factor (HSF)-type, DNA-binding | BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT5G62020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G62020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR027725 Heat shock transcription factor family
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)