Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12178 Utricularia gibba HOM05D005493 ORTHO05D007154 1.9e-100 369.4 219 100.0
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 4.2e-39 165.6 176 51.7
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 1.6e-33 147.1 163 58.9
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 3.5e-33 146.0 211 49.3
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 5.0e-32 142.1 158 60.8
Dinv15338 Davidia involucrata HOM05D005493 ORTHO05D007154 3.2e-31 139.4 175 51.4
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 1.2e-30 137.5 148 50.0
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 1.2e-30 137.5 174 47.7
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 2.1e-30 136.7 148 58.1
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 2.1e-30 136.7 149 59.1
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 3.6e-30 136.0 170 47.6
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 3.6e-30 136.0 162 50.6
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 6.1e-30 135.2 151 59.6
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 8.0e-30 134.8 169 47.9
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 1.0e-29 134.4 173 39.9
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 1.8e-29 133.7 156 54.5
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 1.8e-29 133.7 156 54.5
SGA_v2.0_scaffold186G40127 Striga asiatica HOM05D005493 ORTHO05D007154 2.3e-29 133.3 172 50.0
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 3.0e-29 132.9 172 51.7
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 3.0e-29 132.9 156 47.4
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 4.0e-29 132.5 162 45.1
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 1.5e-28 130.6 165 50.9
Nn1g07522 Nelumbo nucifera HOM05D005493 ORTHO05D007154 1.5e-28 130.6 169 42.6
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 3.3e-28 129.4 163 55.2
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 3.3e-28 129.4 174 52.9
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 5.7e-28 128.6 149 58.4
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 5.7e-28 128.6 159 45.3
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 7.5e-28 128.3 149 52.3
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 9.7e-28 127.9 166 49.4
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 9.7e-28 127.9 167 45.5
Sc17g0007990 Simmondsia chinensis HOM05D005493 ORTHO05D007154 1.3e-27 127.5 179 47.5
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 1.7e-27 127.1 168 51.2
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 2.2e-27 126.7 149 51.7
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 2.2e-27 126.7 148 45.9
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 2.2e-27 126.7 161 41.0
Actinidia11906 Actinidia chinensis HOM05D005493 ORTHO05D007154 4.8e-27 125.6 161 41.0
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 6.3e-27 125.2 150 50.7
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 1.1e-26 124.4 159 51.6
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 1.1e-26 124.4 179 51.4
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 1.1e-26 124.4 173 48.6
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 1.4e-26 124.0 174 55.7
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 1.8e-26 123.6 161 44.7
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 4.1e-26 122.5 159 50.3
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 4.1e-26 122.5 146 52.1
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 4.1e-26 122.5 176 44.9
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 9.1e-26 121.3 162 53.1
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 1.2e-25 120.9 171 51.5
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 1.2e-25 120.9 165 46.7
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 2.0e-25 120.2 165 50.9
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 2.7e-25 119.8 150 56.0
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 2.7e-25 119.8 148 48.6
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 3.5e-25 119.4 148 45.9
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 4.5e-25 119.0 150 62.7
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 5.9e-25 118.6 168 50.0
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 7.7e-25 118.2 164 39.0
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 1.0e-24 117.9 161 52.2
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 1.7e-24 117.1 149 54.4
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 2.2e-24 116.7 171 53.2
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 2.9e-24 116.3 109 51.4
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 5.0e-24 115.5 155 46.5
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 8.5e-24 114.8 172 57.6
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 1.1e-23 114.4 174 48.9
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.5e-23 114.0 160 53.1
Ca_00763_v3 Cicer arietinum L. HOM05D005493 ORTHO05D007154 5.5e-23 112.1 168 44.6
HPP92_027483 Vanilla planifolia HOM05D005493 ORTHO05D007154 5.5e-23 112.1 148 42.6
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 1.6e-22 110.5 111 47.7
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 3.6e-22 109.4 173 50.3
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 8.0e-22 108.2 173 54.3
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 1.4e-21 107.5 162 46.9
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 1.4e-21 107.5 156 53.2
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 2.3e-21 106.7 173 51.4
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 2.3e-21 106.7 156 53.2
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 3.0e-21 106.3 156 53.8
BcaC06g34232 Brassica carinata HOM05D005493 ORTHO05D007154 3.0e-21 106.3 156 50.0
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 5.2e-21 105.5 173 51.4
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 1.5e-20 104.0 152 54.6
BolC7t43675H Brassica oleracea HOM05D005493 ORTHO05D007154 2.0e-20 103.6 173 52.6
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 2.0e-20 103.6 111 52.3
SEGI_02626 Sequoiadendron giganteum HOM05D005493 ORTHO05D007154 2.6e-20 103.2 172 40.1
BcaC04g21607 Brassica carinata HOM05D005493 ORTHO05D007154 3.4e-20 102.8 170 54.7
C09p29920 Brassica napus HOM05D005493 ORTHO05D007154 3.4e-20 102.8 170 54.7
BolC9t55855H Brassica oleracea HOM05D005493 ORTHO05D007154 3.4e-20 102.8 170 54.7
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 4.4e-20 102.4 170 46.5
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 4.4e-20 102.4 94 53.2
A09p23180 Brassica napus HOM05D005493 ORTHO05D007154 5.7e-20 102.1 175 52.6
BraA09t37921Z Brassica rapa HOM05D005493 ORTHO05D007154 5.7e-20 102.1 175 52.6
Thhalv10000943m.g Eutrema salsugineum HOM05D005493 ORTHO05D007154 5.7e-20 102.1 156 56.4
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 6.3e-19 98.6 94 51.1
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 1.1e-18 97.8 170 45.3
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 1.1e-18 97.8 94 51.1
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 1.4e-18 97.4 167 47.3
Oeu025962.1 Olea europaea HOM05D005493 ORTHO05D007154 4.1e-18 95.9 148 54.7
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 9.1e-18 94.7 170 41.2
MBI14_g10146_MAGBIO Magnolia biondii HOM05D005493 ORTHO05D007154 9.1e-18 94.7 168 48.8
FvH4_1g24140 Fragaria vesca HOM05D005493 ORTHO05D007154 1.6e-17 94.0 162 52.5
FAN19G1729 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.6e-17 94.0 162 52.5
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 4.5e-17 92.4 156 53.8
FAN23G1811 Fragaria x ananassa HOM05D005493 ORTHO05D007154 5.9e-17 92.0 162 53.7
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 7.7e-17 91.7 171 45.6
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 2.2e-16 90.1 166 47.6
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 1.1e-15 87.8 150 38.7
AL8G10270 Arabidopsis lyrata HOM05D005493 ORTHO05D007154 1.6e-14 84.0 166 48.2
BcaC06g31350 Brassica carinata HOM05D005493 ORTHO05D007154 2.8e-14 83.2 173 48.6
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 2.8e-14 83.2 173 39.9
Mapoly0011s0174 Marchantia polymorpha HOM05D005493 ORTHO05D007154 3.6e-14 82.8 152 50.7
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 3.6e-14 82.8 210 35.7
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 6.1e-14 82.0 68 52.9
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 8.0e-14 81.6 68 52.9
Sabra16G0010400 Salix brachista HOM05D005493 ORTHO05D007154 1.0e-13 81.3 170 42.9
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 1.8e-13 80.5 148 52.7
Pp3c1_33120 Physcomitrium patens HOM05D005493 ORTHO05D007154 5.2e-13 79.0 151 37.7
AT5G47680 Arabidopsis thaliana HOM05D005493 ORTHO05D007154 6.8e-13 78.6 158 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis HOM05D005493 ORTHO05D007154 8.8e-13 78.2 194 28.9
SHI50428 Sapria himalayana HOM05D005493 ORTHO05D007154 1.5e-12 77.4 118 38.1
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 7.5e-12 75.1 158 40.5
Pp3c2_12110 Physcomitrium patens HOM05D005493 ORTHO05D007154 9.8e-12 74.7 154 31.2
Sabra06G0004100 Salix brachista HOM05D005493 ORTHO05D007154 7.0e-10 68.6 96 39.6
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 7.8e-09 65.1 68 47.1
Cre06.g278500 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 2.1e-06 57.0 172 29.7


User provided reference genes

Program Settings