Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10863 Utricularia gibba HOM05D000299 ORTHO05D000079 1.7e-118 429.5 232 100.0
MSTRG.4203 Avicennia marina HOM05D000299 ORTHO05D000079 1.8e-19 100.5 160 42.5
Migut.G00615 Erythranthe guttata HOM05D000299 ORTHO05D000079 7.4e-18 95.1 143 46.2
MSTRG.21939 Avicennia marina HOM05D000299 ORTHO05D000079 1.3e-17 94.4 140 43.6
Migut.N00329 Erythranthe guttata HOM05D000299 ORTHO05D000079 1.2e-15 87.8 93 54.8
SalBow3G4448 Salvia bowleyana HOM05D000299 ORTHO05D000079 2.6e-15 86.7 155 41.9
SGA_v2.0_scaffold31G12603 Striga asiatica HOM05D000299 ORTHO05D000079 4.5e-15 85.9 142 41.5
MSTRG.24640 Avicennia marina HOM05D000299 ORTHO05D000079 2.2e-14 83.6 150 40.7
Dinv38288 Davidia involucrata HOM05D000299 ORTHO05D000079 2.2e-14 83.6 143 43.4
SalBow2G0679 Salvia bowleyana HOM05D000299 ORTHO05D000079 3.8e-14 82.8 138 42.0
Hma1.2p1_0903F.1_g235050 Hydrangea macrophylla HOM05D000299 ORTHO05D000079 1.1e-13 81.3 153 39.2
CSS0006935 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 1.4e-13 80.9 151 40.4
CSS0049672 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 1.4e-13 80.9 151 40.4
Actinidia39948 Actinidia chinensis HOM05D000299 ORTHO05D000079 1.9e-13 80.5 145 36.6
CiPaw.01G205200 Carya illinoinensis HOM05D000299 ORTHO05D000079 7.2e-13 78.6 139 38.1
Manes.15G049400 Manihot esculenta HOM05D000299 ORTHO05D000079 2.1e-12 77.0 130 40.8
Potri.003G174800 Populus trichocarpa HOM05D000299 ORTHO05D000079 2.7e-12 76.6 130 43.1
Peaxi162Scf00536g00710 Petunia axillaris HOM05D000299 ORTHO05D000079 1.4e-11 74.3 138 43.5
CAN.G1588.11 Capsicum annuum HOM05D000299 ORTHO05D000079 1.8e-11 73.9 142 42.3
Sabra03G0128200 Salix brachista HOM05D000299 ORTHO05D000079 1.8e-11 73.9 130 43.1
Oeu048400.1 Olea europaea HOM05D000299 ORTHO05D000079 2.3e-11 73.6 151 35.1
Peaxi162Scf00047g01542 Petunia axillaris HOM05D000299 ORTHO05D000079 3.0e-11 73.2 154 39.0
vmacro22825 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 3.0e-11 73.2 147 38.1
TWI73G0918 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 6.7e-11 72.0 150 36.0
vmacro23457 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 6.7e-11 72.0 147 37.4
Haze_11545 Corylus avellana HOM05D000299 ORTHO05D000079 8.8e-11 71.6 139 36.0
TWI53G1656 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 8.8e-11 71.6 145 35.2
Sc13g0002890 Simmondsia chinensis HOM05D000299 ORTHO05D000079 1.5e-10 70.9 137 35.8
Medtr1g046680 Medicago truncatula HOM05D000299 ORTHO05D000079 2.0e-10 70.5 128 38.3
Cc03_g07150 Coffea canephora HOM05D000299 ORTHO05D000079 3.3e-10 69.7 154 37.7
Nitab4.5_0003083g0010 Nicotiana tabacum HOM05D000299 ORTHO05D000079 3.3e-10 69.7 144 38.9
Sopen09g034220 Solanum pennellii HOM05D000299 ORTHO05D000079 3.3e-10 69.7 145 38.6
Actinidia25087 Actinidia chinensis HOM05D000299 ORTHO05D000079 4.4e-10 69.3 142 35.9
arahy.Tifrunner.gnm1.ann1.N4A1C9 Arachis hypogaea HOM05D000299 ORTHO05D000079 4.4e-10 69.3 136 41.2
arahy.Tifrunner.gnm1.ann1.NCU4DF Arachis hypogaea HOM05D000299 ORTHO05D000079 4.4e-10 69.3 136 41.2
Solyc09g091250.4 Solanum lycopersicum HOM05D000299 ORTHO05D000079 4.4e-10 69.3 147 39.5
PGSC0003DMG400011579 Solanum tuberosum HOM05D000299 ORTHO05D000079 4.4e-10 69.3 147 39.5
Nitab4.5_0002182g0080 Nicotiana tabacum HOM05D000299 ORTHO05D000079 9.7e-10 68.2 144 36.8
RcHm_v2.0_Chr4g0396671 Rosa chinensis HOM05D000299 ORTHO05D000079 1.7e-09 67.4 135 37.8
CAN.G305.19 Capsicum annuum HOM05D000299 ORTHO05D000079 2.2e-09 67.0 138 38.4
Sabra01G0037700 Salix brachista HOM05D000299 ORTHO05D000079 2.2e-09 67.0 126 41.3
Thecc.04G215200 Theobroma cacao HOM05D000299 ORTHO05D000079 2.8e-09 66.6 144 37.5
DCAR_030778 Daucus carota HOM05D000299 ORTHO05D000079 3.7e-09 66.2 138 37.0
Atru.chr4.1810 Acer truncatum HOM05D000299 ORTHO05D000079 4.8e-09 65.9 135 37.0
Actinidia35941 Actinidia chinensis HOM05D000299 ORTHO05D000079 4.8e-09 65.9 149 34.2
FAN17G2171 Fragaria x ananassa HOM05D000299 ORTHO05D000079 6.3e-09 65.5 129 37.2
FAN22G2276 Fragaria x ananassa HOM05D000299 ORTHO05D000079 6.3e-09 65.5 129 37.2
TAR365G0144 Trochodendron aralioides HOM05D000299 ORTHO05D000079 6.3e-09 65.5 125 36.8
Ca_11823_v3 Cicer arietinum L. HOM05D000299 ORTHO05D000079 8.2e-09 65.1 125 40.0
Rhsim09G0047900 Rhododendron simsii HOM05D000299 ORTHO05D000079 8.2e-09 65.1 144 33.3
FvH4_4g05560 Fragaria vesca HOM05D000299 ORTHO05D000079 1.1e-08 64.7 131 38.9
Psat6g047280 Pisum sativum HOM05D000299 ORTHO05D000079 1.1e-08 64.7 124 37.9
FAN07G2177 Fragaria x ananassa HOM05D000299 ORTHO05D000079 1.4e-08 64.3 131 38.9
MD16G1234900 Malus domestica HOM05D000299 ORTHO05D000079 1.4e-08 64.3 140 39.3
Manes.03G154500 Manihot esculenta HOM05D000299 ORTHO05D000079 1.4e-08 64.3 124 37.1
TAR636G2376 Trochodendron aralioides HOM05D000299 ORTHO05D000079 1.4e-08 64.3 134 39.6
Glyma.10G126900 Glycine max HOM05D000299 ORTHO05D000079 2.4e-08 63.5 130 36.9
FAN12G3392 Fragaria x ananassa HOM05D000299 ORTHO05D000079 3.1e-08 63.2 129 37.2
Duzib212G0584 Durio zibethinus HOM05D000299 ORTHO05D000079 4.1e-08 62.8 140 35.7
Sc19g0005920 Simmondsia chinensis HOM05D000299 ORTHO05D000079 4.1e-08 62.8 134 35.1
Lj6g0010883 Lotus japonicus HOM05D000299 ORTHO05D000079 5.3e-08 62.4 127 39.4
Potri.001G053500 Populus trichocarpa HOM05D000299 ORTHO05D000079 5.3e-08 62.4 125 38.4
PGSC0003DMG400027167 Solanum tuberosum HOM05D000299 ORTHO05D000079 5.3e-08 62.4 148 37.8
Duzib151G0537 Durio zibethinus HOM05D000299 ORTHO05D000079 7.0e-08 62.0 137 39.4
Nitab4.5_0001769g0080 Nicotiana tabacum HOM05D000299 ORTHO05D000079 7.0e-08 62.0 154 37.7
TPR.G11282 Trifolium pratense HOM05D000299 ORTHO05D000079 7.0e-08 62.0 121 35.5
Solyc05g053500.4 Solanum lycopersicum HOM05D000299 ORTHO05D000079 9.1e-08 61.6 137 36.5
ClCG06G007510 Citrullus lanatus HOM05D000299 ORTHO05D000079 2.0e-07 60.5 178 33.1
Actinidia28395 Actinidia chinensis HOM05D000299 ORTHO05D000079 2.6e-07 60.1 37 67.6
CSS0045839 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 2.6e-07 60.1 45 62.2
Medtr5g007600 Medicago truncatula HOM05D000299 ORTHO05D000079 4.5e-07 59.3 125 36.0
MELO3C023076.2 Cucumis melo HOM05D000299 ORTHO05D000079 7.7e-07 58.5 179 30.2
CsaV3_2G012140 Cucumis sativus L. HOM05D000299 ORTHO05D000079 1.7e-06 57.4 177 30.5
Sopen05g032000 Solanum pennellii HOM05D000299 ORTHO05D000079 1.7e-06 57.4 142 35.9
Hund19256 Selenicereus undatus HOM05D000299 ORTHO05D000079 2.9e-06 56.6 148 32.4
THA.LOC104804819 Tarenaya hassleriana HOM05D000299 ORTHO05D000079 3.8e-06 56.2 160 30.6
Lalb_Chr19g0128731 Lupinus albus HOM05D000299 ORTHO05D000079 8.5e-06 55.1 125 36.8


User provided reference genes

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