Gene: Sopen09g034220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g034220
  • Transcript Identifier Sopen09g034220.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 82174441-82176354 : positive

Gene Family Information

  • ID HOM05D000299
  • #Genes/#Species 1506/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g034220.1

Descriptions

  • Description Encodes a member of the GATA factor family of zinc finger transcription factors. | GATA transcription factor 1 (GATA1) | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045893
ISO
PLAZA Homology (enrichment)positive regulation of transcription, DNA-templated HOM05D000299
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G24050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000299
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G24050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D000299

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)