Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 1.0e-48 196.4 98 100.0
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 2.4e-34 148.7 97 72.2
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 2.4e-34 148.7 97 74.2
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 1.3e-32 142.9 94 73.4
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 1.7e-32 142.5 94 73.4
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 2.9e-32 141.7 97 70.1
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.0e-32 141.0 93 73.1
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 6.5e-32 140.6 94 73.4
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.9e-31 139.0 94 71.3
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 2.5e-31 138.7 94 71.3
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.5e-31 137.5 94 70.2
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 2.1e-30 135.6 94 69.1
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.1e-30 135.6 94 66.0
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 2.7e-30 135.2 95 66.3
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 3.6e-30 134.8 94 68.1
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 3.6e-30 134.8 86 73.3
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 4.7e-30 134.4 94 68.1
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 6.1e-30 134.0 94 68.1
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 6.1e-30 134.0 94 66.0
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 7.9e-30 133.7 94 68.1
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 7.9e-30 133.7 94 69.1
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 7.9e-30 133.7 94 66.0
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.4e-29 132.9 91 68.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.4e-29 132.9 91 68.1
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 3.0e-29 131.7 94 67.0
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.9e-29 131.3 94 64.9
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 3.9e-29 131.3 94 68.1
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.9e-29 131.3 95 68.4
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 5.1e-29 131.0 94 64.9
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 5.1e-29 131.0 94 68.1
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 6.7e-29 130.6 94 66.0
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 8.8e-29 130.2 84 70.2
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 8.8e-29 130.2 95 65.3
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 8.8e-29 130.2 94 63.8
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.5e-28 129.4 95 67.4
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.5e-28 129.4 94 64.9
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.5e-28 129.4 93 63.4
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 2.0e-28 129.0 94 63.8
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 2.6e-28 128.6 95 64.2
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.6e-28 128.6 94 66.0
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 2.6e-28 128.6 94 66.0
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 2.6e-28 128.6 95 66.3
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.6e-28 128.6 94 63.8
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 2.6e-28 128.6 98 65.3
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.4e-28 127.9 94 64.9
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 4.4e-28 127.9 94 61.7
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 7.4e-28 127.1 83 69.9
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.3e-27 126.3 92 65.2
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.7e-27 125.9 88 65.9
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 2.2e-27 125.6 95 65.3
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 2.2e-27 125.6 83 67.5
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 2.2e-27 125.6 94 64.9
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.2e-27 125.6 88 65.9
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 2.8e-27 125.2 94 60.6
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 3.7e-27 124.8 95 65.3
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 3.7e-27 124.8 95 65.3
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 3.7e-27 124.8 95 66.3
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 3.7e-27 124.8 94 64.9
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 4.8e-27 124.4 80 68.8
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.3e-27 124.0 94 66.0
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 8.2e-27 123.6 94 60.6
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.1e-26 123.2 94 61.7
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 1.1e-26 123.2 95 64.2
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.1e-26 123.2 84 67.9
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 1.4e-26 122.9 94 59.6
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.8e-26 122.5 84 66.7
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 2.4e-26 122.1 96 64.6
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 2.4e-26 122.1 94 63.8
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.1e-26 121.7 87 69.0
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 5.3e-26 120.9 95 62.1
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 7.0e-26 120.6 84 65.5
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 9.1e-26 120.2 84 69.0
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 9.1e-26 120.2 95 64.2
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 2.0e-25 119.0 83 66.3
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 2.6e-25 118.6 81 66.7
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.6e-25 118.6 80 70.0
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.5e-25 118.2 120 50.8
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.7e-24 115.9 82 63.4
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 1.7e-24 115.9 82 63.4
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 3.8e-24 114.8 81 63.0
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 5.0e-24 114.4 79 64.6
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 6.5e-24 114.0 81 61.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 6.5e-24 114.0 87 62.1
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.1e-23 113.2 78 64.1
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.1e-23 113.2 78 64.1
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.1e-23 113.2 81 61.7
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 1.5e-23 112.8 90 60.0
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.9e-23 112.5 79 64.6
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 2.5e-23 112.1 94 55.3
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.5e-23 112.1 78 65.4
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.5e-23 112.1 78 65.4
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 4.2e-23 111.3 76 68.4
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 5.5e-23 110.9 77 63.6
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 5.5e-23 110.9 77 63.6
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 5.5e-23 110.9 77 63.6
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 7.2e-23 110.5 77 64.9
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.2e-22 109.8 80 63.8
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 2.7e-22 108.6 95 55.8
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 2.7e-22 108.6 74 71.6
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 1.0e-21 106.7 83 55.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 8.8e-21 103.6 76 64.5
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 2.6e-20 102.1 84 61.9
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.6e-20 102.1 74 66.2
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 4.8e-19 97.8 89 52.8
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 8.2e-19 97.1 84 57.1
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 2.4e-18 95.5 64 68.8
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 3.8e-16 88.2 91 47.3
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 6.5e-16 87.4 85 48.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 2.1e-14 82.4 50 72.0
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.3e-11 73.2 92 39.1
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.7e-08 62.8 92 38.0
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.5e-07 59.7 86 34.9


User provided reference genes

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