Gene: AT1G13330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G13330
  • Transcript Identifier AT1G13330.1
  • Gene Type Coding gene
  • Location Chr1 : 4568008-4569410 : positive

Gene Family Information

  • ID HOM05D006955
  • #Genes/#Species 115/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G13330.1
  • symbol AHP2
  • Alias HOP2,HOMOLOGOUS-PAIRING PROTEIN 2
  • full_name Arabidopsis Hop2 homolog
  • uniprot Q9FX64

Descriptions

  • Description Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP)
  • Computational description Arabidopsis Hop2 homolog (AHP2); CONTAINS InterPro DOMAIN/s: Tat binding protein 1-interacting (InterPro:IPR010776); Has 3022 Blast hits to 2708 proteins in 418 species: Archae - 82; Bacteria - 427; Metazoa - 1139; Fungi - 246; Plants - 98; Viruses - 21; Other Eukaryotes - 1009 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051026
IMP
Gene Ontologychiasma assembly1
GO:0000709
IBA
Gene Ontologymeiotic joint molecule formation2
GO:0007129
IBA
Gene Ontologyhomologous chromosome pairing at meiosis2
GO:0010774
IBA
Gene Ontologymeiotic strand invasion involved in reciprocal meiotic recombination2
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0007131
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IEA
InterProreciprocal meiotic recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding2
GO:0120230
IBA
Gene Ontologyrecombinase activator activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0120231
IBA
Gene OntologyDNA recombinase auxiliary factor complex2
GO:0000794
IBA
Gene Ontologycondensed nuclear chromosome2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR010776 Homologous-pairing protein 2, winged helix domain
IPR040661 Leucine zipper with capping helix domain
IPR040461 Homologous-pairing protein 2
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
13.3.5.4.5.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.HOP2-MND1 presynaptic filament stabilization complex.component HOP2