Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25095 Utricularia gibba HOM05D002744 ORTHO05D006546 1.7e-194 682.6 354 100.0
MSTRG.5049 Avicennia marina HOM05D002744 ORTHO05D006546 1.8e-111 406.8 358 62.0
SGA_v2.0_scaffold5G02937 Striga asiatica HOM05D000129 ORTHO05D000144 1.6e-109 400.2 354 61.9
Dinv21810 Davidia involucrata HOM05D002744 ORTHO05D006546 4.3e-102 375.6 357 60.8
Migut.N01809 Erythranthe guttata HOM05D002744 ORTHO05D006546 2.0e-99 366.7 359 59.3
Cc02_g05710 Coffea canephora HOM05D002744 ORTHO05D006546 2.6e-99 366.3 356 57.9
CSS0032617 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 5.9e-99 365.2 357 57.1
Rhsim09G0183300 Rhododendron simsii HOM05D002744 ORTHO05D006546 2.5e-97 359.8 375 55.5
Actinidia00987 Actinidia chinensis HOM05D002744 ORTHO05D006546 3.2e-97 359.4 357 57.7
Hma1.2p1_1240F.1_g269620 Hydrangea macrophylla HOM05D002744 ORTHO05D006546 3.2e-97 359.4 357 56.6
GSVIVG01032722001 Vitis vinifera HOM05D002744 ORTHO05D006546 4.2e-97 359.0 357 56.3
vmacro09982 Vaccinium macrocarpon HOM05D002744 ORTHO05D006546 1.2e-96 357.5 376 54.5
QL08p064289 Quercus lobata HOM05D002744 ORTHO05D006546 7.9e-96 354.8 357 56.9
CiPaw.02G197400 Carya illinoinensis HOM05D002744 ORTHO05D006546 1.0e-95 354.4 357 56.6
Manes.07G139400 Manihot esculenta HOM05D002744 ORTHO05D006546 1.0e-95 354.4 358 57.3
RcHm_v2.0_Chr1g0371491 Rosa chinensis HOM05D002744 ORTHO05D006546 2.3e-95 353.2 358 56.1
Eucgr.J00153 Eucalyptus grandis HOM05D002744 ORTHO05D006546 8.8e-95 351.3 356 56.2
Prupe.2G259600 Prunus persica HOM05D002744 ORTHO05D006546 1.1e-94 350.9 358 56.4
Duzib106G0255 Durio zibethinus HOM05D002744 ORTHO05D006546 2.5e-94 349.7 356 55.1
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 9.7e-94 347.8 357 54.9
SalBow1G3835 Salvia bowleyana HOM05D002744 ORTHO05D006546 1.3e-93 347.4 346 57.8
TAR623G1472 Trochodendron aralioides HOM05D002744 ORTHO05D006546 1.7e-93 347.1 353 55.2
PGSC0003DMG400024457 Solanum tuberosum HOM05D002744 ORTHO05D006546 2.2e-93 346.7 356 56.5
Thecc.10G007000 Theobroma cacao HOM05D002744 ORTHO05D006546 2.2e-93 346.7 356 54.5
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.7e-93 345.9 357 54.6
Nitab4.5_0000928g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 8.2e-93 344.7 356 56.2
FvH4_7g25510 Fragaria vesca HOM05D002744 ORTHO05D006546 1.1e-92 344.4 357 54.3
PGR044G1552 Punica granatum HOM05D002744 ORTHO05D006546 1.1e-92 344.4 357 54.9
Gohir.A10G240800 Gossypium hirsutum HOM05D002744 ORTHO05D006546 5.3e-92 342.0 356 55.3
Gorai.011G293300 Gossypium raimondii HOM05D002744 ORTHO05D006546 5.3e-92 342.0 356 55.6
Gohir.D10G253000 Gossypium hirsutum HOM05D002744 ORTHO05D006546 2.0e-91 340.1 356 55.1
Lalb_Chr17g0336941 Lupinus albus HOM05D002744 ORTHO05D006546 2.0e-91 340.1 357 54.3
Glyma.02G230100 Glycine max HOM05D002744 ORTHO05D006546 2.6e-91 339.7 356 55.1
MD07G1229400 Malus domestica HOM05D002744 ORTHO05D006546 2.6e-91 339.7 356 54.8
ClCG00G004700 Citrullus lanatus HOM05D002744 ORTHO05D006546 5.9e-91 338.6 356 52.8
ClCG06G010230 Citrullus lanatus HOM05D002744 ORTHO05D006546 5.9e-91 338.6 356 52.8
CANSAT56G2377 Cannabis sativa HOM05D002744 ORTHO05D006546 1.0e-90 337.8 356 53.4
ClCG07G004810 Citrullus lanatus HOM05D002744 ORTHO05D006546 1.0e-90 337.8 356 52.2
Sopen02g017560 Solanum pennellii HOM05D002744 ORTHO05D006546 1.3e-90 337.4 353 56.1
Solyc02g068420.4 Solanum lycopersicum HOM05D002744 ORTHO05D006546 2.2e-90 336.7 353 56.1
CDE04G1223 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 2.9e-90 336.3 353 53.5
ECA238G3482 Erigeron canadensis HOM05D002744 ORTHO05D006546 6.5e-90 335.1 353 53.5
CsaV3_5G010730 Cucumis sativus L. HOM05D002744 ORTHO05D006546 8.5e-90 334.7 358 53.9
Potri.008G075700 Populus trichocarpa HOM05D002744 ORTHO05D006546 8.5e-90 334.7 359 53.5
Nn2g11076 Nelumbo nucifera HOM05D002744 ORTHO05D006546 1.1e-89 334.3 353 53.8
MELO3C020109.2 Cucumis melo HOM05D002744 ORTHO05D006546 1.4e-89 334.0 359 53.2
PGSC0003DMG400009431 Solanum tuberosum HOM05D002744 ORTHO05D006546 1.4e-89 334.0 353 55.5
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.5e-89 333.2 374 51.9
VMungo0647G1938 Vigna mungo HOM05D002744 ORTHO05D006546 5.5e-89 332.0 357 53.2
PSO210G7497 Papaver somniferum HOM05D002744 ORTHO05D006546 7.2e-89 331.6 371 51.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 9.4e-89 331.3 374 51.3
DCAR_011892 Daucus carota HOM05D002744 ORTHO05D006546 1.2e-88 330.9 357 53.5
HanXRQChr10g0309081 Helianthus annuus HOM05D002744 ORTHO05D006546 1.2e-88 330.9 357 52.4
PSO832G1082 Papaver somniferum HOM05D002744 ORTHO05D006546 1.6e-88 330.5 371 51.8
Haze_17322 Corylus avellana HOM05D002744 ORTHO05D006546 2.1e-88 330.1 376 52.7
SalBow8G2269 Salvia bowleyana HOM05D002744 ORTHO05D006546 2.1e-88 330.1 346 56.4
Ca_06017_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 3.6e-88 329.3 359 53.5
Lsat_1_v5_gn_2_125961 Lactuca sativa HOM05D002744 ORTHO05D006546 4.7e-88 328.9 353 53.8
MD01G1161500 Malus domestica HOM05D002744 ORTHO05D006546 4.7e-88 328.9 358 53.9
SalBow8G4474 Salvia bowleyana HOM05D002744 ORTHO05D006546 4.7e-88 328.9 346 56.4
Actinidia07807 Actinidia chinensis HOM05D002744 ORTHO05D006546 7.9e-88 328.2 355 52.1
Sed0016960 Sechium edule HOM05D002744 ORTHO05D006546 7.9e-88 328.2 356 52.5
Glyma.14G196400 Glycine max HOM05D002744 ORTHO05D006546 1.8e-87 327.0 357 52.7
Ciclev10031901m.g Citrus clementina HOM05D002744 ORTHO05D006546 2.3e-87 326.6 357 52.4
Nitab4.5_0000263g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 3.0e-87 326.2 392 51.0
MBI16_g02735_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D006546 1.1e-86 324.3 353 51.8
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 4.4e-86 322.4 362 51.9
Lj1C963G12 Lonicera japonica HOM05D002744 ORTHO05D006546 5.7e-86 322.0 357 52.1
Aqoxy2G00754 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 2.8e-85 319.7 358 50.8
HanXRQChr07g0186551 Helianthus annuus HOM05D002744 ORTHO05D006546 6.3e-85 318.5 364 51.4
THA.LOC104824347 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 8.2e-85 318.2 357 51.8
Peaxi162Scf00284g00133 Petunia axillaris HOM05D002744 ORTHO05D006546 1.8e-84 317.0 358 53.4
Sc10g0002810 Simmondsia chinensis HOM05D002744 ORTHO05D006546 1.8e-84 317.0 356 50.3
Psat0s1511g0040 Pisum sativum HOM05D002744 ORTHO05D006546 4.1e-84 315.8 356 50.8
Hund13511 Selenicereus undatus HOM05D002744 ORTHO05D006546 1.2e-83 314.3 358 50.8
Phvul.008G258300 Phaseolus vulgaris HOM05D002744 ORTHO05D006546 2.0e-83 313.5 357 50.4
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 7.7e-83 311.6 356 51.4
Ah.05g176210 Amaranthus hybridus HOM05D002744 ORTHO05D006546 1.3e-82 310.8 358 51.4
THA.LOC104814944 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 1.3e-82 310.8 369 50.1
Aa31LG5G19130 Aethionema arabicum HOM05D002744 ORTHO05D006546 4.2e-81 305.8 361 49.6
HPP92_001733 Vanilla planifolia HOM05D002744 ORTHO05D006546 7.2e-81 305.1 359 48.5
Os05g0144200 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D006546 2.3e-79 300.1 377 47.5
LjContig00357g0012394 Lotus japonicus HOM05D002744 ORTHO05D006546 3.0e-79 299.7 361 50.1
Sabra08G0056300 Salix brachista HOM05D002744 ORTHO05D006546 6.7e-79 298.5 422 44.5
EL10Ac2g04290 Beta vulgaris HOM05D002744 ORTHO05D006546 2.6e-78 296.6 357 48.5
Carub.0004s2268 Capsella rubella HOM05D002744 ORTHO05D006546 3.3e-78 296.2 376 47.6
Lj1g0011333 Lotus japonicus HOM05D002744 ORTHO05D006546 3.7e-77 292.7 376 48.9
Zm00001eb417890 Zea mays HOM05D002744 ORTHO05D006546 1.4e-76 290.8 387 45.7
Sp4g22770 Schrenkiella parvula HOM05D002744 ORTHO05D006546 3.1e-76 289.7 374 47.1
Thhalv10016839m.g Eutrema salsugineum HOM05D002744 ORTHO05D006546 1.2e-75 287.7 359 47.6
AL4G38260 Arabidopsis lyrata HOM05D002744 ORTHO05D006546 5.9e-75 285.4 427 43.1
CARHR135540 Cardamine hirsuta HOM05D002744 ORTHO05D006546 1.7e-74 283.9 357 48.2
TWI56G0434 Tripterygium wilfordii HOM05D002744 ORTHO05D006546 5.0e-74 282.3 358 48.9
SEGI_20256 Sequoiadendron giganteum HOM05D002744 ORTHO05D006546 1.1e-73 281.2 368 45.4
TPR.G14721 Trifolium pratense HOM05D002744 ORTHO05D006546 1.2e-72 277.7 357 47.3
BraA05t19165Z Brassica rapa HOM05D002744 ORTHO05D006546 2.7e-72 276.6 377 46.4
A05p01680 Brassica napus HOM05D002744 ORTHO05D006546 1.0e-71 274.6 377 46.2
ATR1127G109 Amborella trichopoda HOM05D002744 ORTHO05D006546 4.0e-71 272.7 335 47.8
AUR62012335 Chenopodium quinoa HOM05D002744 ORTHO05D006546 2.2e-69 266.9 356 45.8
BcaB06g29140 Brassica carinata HOM05D002744 ORTHO05D006546 2.8e-69 266.5 377 45.1
Medtr5g083780 Medicago truncatula HOM05D002744 ORTHO05D006546 2.8e-69 266.5 358 45.8
BcaC02g12712 Brassica carinata HOM05D002744 ORTHO05D006546 3.7e-69 266.2 379 45.4
AUR62022979 Chenopodium quinoa HOM05D002744 ORTHO05D006546 6.3e-69 265.4 367 45.8
arahy.Tifrunner.gnm1.ann1.T368MT Arachis hypogaea HOM05D002744 ORTHO05D006546 6.5e-66 255.4 357 44.5
arahy.Tifrunner.gnm1.ann1.G9S3DZ Arachis hypogaea HOM05D002744 ORTHO05D006546 1.9e-65 253.8 357 44.0
CDE03G0451 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 2.5e-65 253.4 355 45.9
BolC4t21844H Brassica oleracea HOM05D002744 ORTHO05D006546 3.0e-63 246.5 377 43.2
BraA04t18540Z Brassica rapa HOM05D002744 ORTHO05D006546 6.8e-63 245.4 376 42.8
C04p68230 Brassica napus HOM05D002744 ORTHO05D006546 1.2e-62 244.6 376 43.1
BolC4t28327H Brassica oleracea HOM05D002744 ORTHO05D006546 1.2e-62 244.6 376 43.1
C04p01940 Brassica napus HOM05D002744 ORTHO05D006546 2.6e-62 243.4 377 43.0
A04p30810 Brassica napus HOM05D002744 ORTHO05D006546 1.7e-61 240.7 376 42.6
BcaC02g07313 Brassica carinata HOM05D002744 ORTHO05D006546 1.1e-60 238.0 372 43.0
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 2.8e-56 223.4 301 45.5
Oeu026182.1 Olea europaea HOM05D002744 ORTHO05D006546 2.3e-55 220.3 240 54.6
AT2G40430 Arabidopsis thaliana HOM05D002744 ORTHO05D006546 2.4e-52 210.3 358 39.4
CAN.G39.17 Capsicum annuum HOM05D002744 ORTHO05D006546 1.7e-50 204.1 237 52.7
Mapoly0001s0132 Marchantia polymorpha HOM05D002744 ORTHO05D006546 4.0e-47 193.0 379 34.6
AagrBONN_evm.TU.Sc2ySwM_344.2566 Anthoceros agrestis HOM05D002744 ORTHO05D006546 9.8e-46 188.3 338 34.6
CBR_g88544 Chara braunii HOM05D002744 ORTHO05D006546 4.9e-45 186.0 427 32.8
SHI18675 Sapria himalayana HOM05D002744 ORTHO05D006546 3.2e-44 183.3 306 40.5
Ca_06977_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 5.4e-44 182.6 177 56.5
Ca_27928_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 1.1e-41 174.9 303 40.3
MBI16_g06795_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D018022 7.5e-38 162.2 171 51.5
Pp3c22_7700 Physcomitrium patens HOM05D002744 ORTHO05D006546 1.8e-31 141.0 360 32.2
Oeu017758.1 Olea europaea HOM05D002744 ORTHO05D006546 3.4e-30 136.7 108 65.7
CAN.G39.16 Capsicum annuum HOM05D002744 ORTHO05D006546 3.7e-29 133.3 113 64.6
Solyc06g050820.3 Solanum lycopersicum HOM05D002744 ORTHO05D006546 9.5e-25 118.6 163 47.2
AUR62042571 Chenopodium quinoa HOM05D002744 ORTHO05D006546 1.8e-15 87.8 102 48.0
PRCOL_00000452 Prasinoderma coloniale HOM05D002744 ORTHO05D006546 2.6e-14 84.0 394 24.4
HanXRQChr04g0102991 Helianthus annuus HOM05D002744 ORTHO05D006546 9.9e-14 82.0 58 65.5
Aqoxy466s002 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 2.9e-13 80.5 119 43.7
MCO01G055 Micromonas commoda HOM05D002744 ORTHO05D006546 3.8e-13 80.1 209 28.7
Cre07.g348250 Chlamydomonas reinhardtii HOM05D002744 ORTHO05D006546 1.1e-07 62.0 245 25.7
arahy.Tifrunner.gnm1.ann1.LJQ8FI Arachis hypogaea HOM05D002744 ORTHO05D006546 4.0e-07 60.1 57 54.4
Atru.chr12.137 Acer truncatum HOM05D002744 ORTHO05D006546 5.3e-07 59.7 55 58.2
SHI18673 Sapria himalayana HOM05D002744 ORTHO05D006546 2.0e-06 57.8 55 61.8
arahy.Tifrunner.gnm1.ann1.WF3XAB Arachis hypogaea HOM05D002744 ORTHO05D006546 7.6e-06 55.8 59 50.8


User provided reference genes

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