Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 0.0e+00 1561.6 800 100.0
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 7.6e-288 993.8 688 74.0
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 6.0e-285 984.2 640 76.9
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.1e-273 946.8 689 71.3
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 1.7e-271 939.5 706 69.1
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.6e-269 932.9 702 69.1
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 6.0e-269 931.0 705 69.6
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 2.5e-267 925.6 699 69.2
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 5.7e-267 924.5 694 69.6
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 9.0e-265 917.1 700 68.9
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 2.9e-263 912.1 692 68.5
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 4.2e-262 908.3 698 67.3
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 1.2e-261 906.7 689 67.2
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 2.1e-261 906.0 696 67.1
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 2.7e-261 905.6 708 67.9
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 6.1e-261 904.4 690 67.4
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 7.9e-261 904.0 696 68.7
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 3.0e-260 902.1 692 67.6
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 4.8e-258 894.8 698 66.5
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 9.1e-257 890.6 697 66.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 1.2e-256 890.2 694 66.4
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 5.9e-256 887.9 691 66.1
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 5.5e-254 881.3 696 65.1
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 9.4e-254 880.6 701 66.0
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 1.6e-253 879.8 706 65.6
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 2.7e-253 879.0 701 66.0
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 2.7e-253 879.0 701 66.0
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 7.9e-253 877.5 688 65.6
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.4e-252 876.7 748 63.5
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 6.7e-252 874.4 698 65.0
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 7.4e-251 870.9 690 65.2
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 7.4e-251 870.9 690 65.2
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 9.7e-251 870.5 700 64.6
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 3.7e-250 868.6 695 65.6
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.8e-249 866.3 690 64.6
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 2.4e-249 865.9 686 66.3
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 2.6e-248 862.4 762 60.5
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 5.0e-247 858.2 668 64.7
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 5.0e-247 858.2 696 63.8
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 1.9e-246 856.3 695 64.3
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 2.5e-246 855.9 686 65.2
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 2.5e-246 855.9 703 62.9
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 7.2e-246 854.4 694 64.4
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 9.4e-246 854.0 739 62.2
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 6.1e-245 851.3 709 61.5
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.4e-244 850.1 667 64.6
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 7.4e-243 844.3 695 63.7
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.4e-241 840.1 695 62.6
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 7.0e-241 837.8 700 61.7
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 1.6e-240 836.6 702 62.0
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 4.5e-240 835.1 702 61.8
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 1.7e-239 833.2 702 61.8
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 5.0e-239 831.6 699 62.4
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 5.0e-239 831.6 732 59.4
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 8.5e-239 830.9 732 59.4
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 1.5e-238 830.1 691 63.0
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.5e-238 830.1 696 61.6
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 7.2e-238 827.8 698 62.5
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.6e-237 826.6 690 62.5
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.6e-237 826.6 696 61.4
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.1e-237 826.2 725 59.4
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 2.7e-237 825.9 699 62.7
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 8.8e-236 820.8 674 62.5
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 4.4e-235 818.5 695 62.3
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 5.7e-235 818.1 693 61.9
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 6.3e-234 814.7 700 61.6
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-233 813.5 689 62.0
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 1.4e-233 813.5 689 61.8
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.4e-233 812.8 698 61.7
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 3.1e-233 812.4 698 61.7
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 7.0e-233 811.2 689 61.5
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 9.1e-233 810.8 698 60.3
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 1.2e-232 810.4 704 61.6
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.6e-232 810.1 694 61.4
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 2.9e-231 805.8 694 60.7
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 8.5e-231 804.3 702 60.4
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 1.1e-230 803.9 699 60.5
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 3.6e-229 798.9 675 61.2
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 1.0e-228 797.3 692 61.0
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 1.0e-228 797.3 700 60.0
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 4.4e-227 792.0 692 60.8
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 9.8e-227 790.8 591 67.3
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 2.0e-224 783.1 674 60.7
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 1.6e-221 773.5 698 57.0
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 9.8e-219 764.2 1019 45.8
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 2.8e-218 762.7 703 58.7
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 2.8e-218 762.7 703 58.7
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.2e-216 757.3 703 58.7
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 7.8e-216 754.6 703 58.6
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-212 743.8 730 57.4
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 1.4e-209 733.8 518 68.7
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 6.6e-207 724.9 733 52.9
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 2.5e-206 723.0 699 57.1
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 5.6e-206 721.8 707 53.0
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 3.4e-203 712.6 697 53.8
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 4.6e-200 702.2 512 67.0
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 8.9e-196 688.0 453 72.4
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 5.8e-195 685.3 699 54.5
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 6.6e-191 671.8 688 51.3
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.2e-187 661.0 438 73.3
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 4.0e-180 636.0 552 60.7
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 4.2e-177 625.9 834 44.7
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 3.0e-175 619.8 668 51.2
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 6.9e-172 608.6 425 66.1
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 4.2e-169 599.4 691 50.4
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 5.1e-167 592.4 714 46.1
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 1.5e-155 554.3 551 52.8
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 1.1e-150 538.1 708 42.4
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.0e-147 527.3 589 50.3
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 7.7e-147 525.4 721 42.0
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 3.6e-144 516.5 556 52.9
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 3.8e-122 443.4 462 53.9
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 3.6e-120 436.8 540 42.6
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 8.3e-117 425.6 430 52.8
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.4e-108 398.3 408 57.1
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-93 347.1 439 48.5
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 6.0e-91 339.7 295 58.6
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 2.9e-85 320.9 313 55.3
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 4.1e-84 317.0 377 49.3
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 2.1e-83 314.7 772 31.6
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 4.7e-80 303.5 335 51.3
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 1.3e-77 295.4 665 34.4
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 2.2e-77 294.7 366 50.3
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 7.3e-65 253.1 247 53.0
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 1.7e-61 241.9 257 52.9
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 1.2e-59 235.7 261 56.7
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 4.3e-57 227.3 131 80.9
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 6.2e-56 223.4 262 47.7
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-54 217.6 190 57.4
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 4.9e-53 213.8 142 74.6
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 6.4e-53 213.4 276 51.1
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 4.3e-49 200.7 263 50.6
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 2.4e-47 194.9 263 49.0
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.2e-43 182.6 105 80.0
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 1.1e-41 176.0 119 66.4
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-38 166.0 120 68.3
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 2.2e-37 161.8 102 75.5
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 6.5e-37 160.2 102 74.5
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 4.2e-36 157.5 107 68.2
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.7e-35 154.8 87 81.6
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.7e-35 154.8 87 81.6
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.7e-35 154.8 87 81.6
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 1.8e-34 152.1 103 72.8
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.3e-34 151.8 85 81.2
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 3.0e-34 151.4 246 45.9
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.9e-33 148.7 150 51.3
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 2.8e-32 144.8 116 63.8
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-31 142.9 227 37.9
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 1.8e-31 142.1 175 43.4
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 4.5e-30 137.5 206 41.7
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 5.9e-30 137.1 106 62.3
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 3.2e-28 131.3 79 73.4
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 9.4e-28 129.8 79 73.4
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 7.9e-27 126.7 70 74.3
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 3.9e-26 124.4 207 37.2
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-24 119.0 70 68.6
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 1.8e-23 115.5 161 49.7
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-19 102.4 108 53.7
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-18 99.4 97 51.5
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 3.0e-18 98.2 59 71.2
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 3.0e-18 98.2 56 75.0
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 3.9e-18 97.8 62 72.6
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 6.7e-18 97.1 56 73.2
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-17 95.5 62 72.6
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 4.4e-17 94.4 101 52.5
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 7.4e-17 93.6 70 62.9
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 2.2e-16 92.0 56 73.2
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-15 89.7 126 41.3
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-15 89.4 191 41.9
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 1.8e-15 89.0 78 56.4
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 2.6e-14 85.1 96 46.9
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 3.5e-14 84.7 46 82.6
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 2.9e-13 81.6 47 78.7
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 3.8e-13 81.3 55 63.6
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 1.1e-12 79.7 50 74.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 1.1e-12 79.7 50 74.0
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-12 79.7 63 63.5
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 3.6e-11 74.7 78 50.0
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 5.2e-10 70.9 178 37.1
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 8.8e-10 70.1 55 61.8
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 6.3e-08 63.9 51 54.9
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 2.4e-07 62.0 143 29.4
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 5.3e-07 60.8 99 48.5
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 7.0e-07 60.5 248 32.7
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 5.9e-06 57.4 34 76.5


User provided reference genes

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