Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9968 Utricularia gibba HOM05D003177 ORTHO05D003481 2.1e-200 702.2 362 100.0
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 4.4e-49 199.5 362 43.6
Migut.H01856 Erythranthe guttata HOM05D003177 ORTHO05D003481 2.8e-19 100.5 193 35.8
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 2.8e-19 100.5 200 37.0
MSTRG.14415 Avicennia marina HOM05D003177 ORTHO05D003481 5.2e-18 96.3 316 28.8
Dinv22304 Davidia involucrata HOM05D003177 ORTHO05D003481 2.2e-16 90.9 193 34.7
Oeu007628.1 Olea europaea HOM05D003177 ORTHO05D003481 2.8e-16 90.5 113 46.0
Actinidia10706 Actinidia chinensis HOM05D003177 ORTHO05D003481 8.3e-16 89.0 192 34.4
Lj3g0022760 Lotus japonicus HOM05D003177 ORTHO05D003481 9.2e-15 85.5 128 40.6
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 9.2e-15 85.5 166 34.9
vmacro11767 Vaccinium macrocarpon HOM05D003177 ORTHO05D003481 9.2e-15 85.5 173 34.7
ECA246G0280 Erigeron canadensis HOM05D003177 ORTHO05D003481 2.0e-14 84.3 133 39.8
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 2.0e-14 84.3 192 33.3
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 2.7e-14 84.0 109 44.0
Ca_01752_v3 Cicer arietinum L. HOM05D003177 ORTHO05D003481 3.5e-14 83.6 147 38.1
HanXRQChr05g0159201 Helianthus annuus HOM05D003177 ORTHO05D003481 4.5e-14 83.2 125 42.4
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 4.5e-14 83.2 134 38.8
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 7.8e-14 82.4 113 41.6
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 1.0e-13 82.0 123 42.3
Lsat_1_v5_gn_5_5721 Lactuca sativa HOM05D003177 ORTHO05D003481 1.3e-13 81.6 133 40.6
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 1.7e-13 81.3 119 41.2
Psat5g251840 Pisum sativum HOM05D003177 ORTHO05D003481 2.3e-13 80.9 103 41.7
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 2.9e-13 80.5 183 33.9
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 5.0e-13 79.7 131 37.4
MD03G1211600 Malus domestica HOM05D003177 ORTHO05D003481 6.6e-13 79.3 124 40.3
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 1.1e-12 78.6 192 34.9
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 1.1e-12 78.6 143 37.8
Duzib213G0670 Durio zibethinus HOM05D003177 ORTHO05D003481 1.5e-12 78.2 193 32.1
Lalb_Chr14g0366151 Lupinus albus HOM05D003177 ORTHO05D003481 1.5e-12 78.2 128 39.1
QL08p013313 Quercus lobata HOM05D003177 ORTHO05D003481 1.5e-12 78.2 129 38.8
Prupe.4G202300 Prunus persica HOM05D003177 ORTHO05D003481 1.9e-12 77.8 113 39.8
VMungo1080G1398 Vigna mungo HOM05D003177 ORTHO05D003481 1.9e-12 77.8 107 41.1
AUR62020553 Chenopodium quinoa HOM05D003177 ORTHO05D003481 2.5e-12 77.4 202 28.7
AUR62015646 Chenopodium quinoa HOM05D003177 ORTHO05D003481 3.3e-12 77.0 142 33.8
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 4.3e-12 76.6 103 40.8
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 4.3e-12 76.6 138 34.1
Ciclev10008319m.g Citrus clementina HOM05D003177 ORTHO05D003481 4.3e-12 76.6 150 34.7
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 5.6e-12 76.3 103 39.8
EL10Ac4g07970 Beta vulgaris HOM05D003177 ORTHO05D003481 5.6e-12 76.3 145 33.8
RcHm_v2.0_Chr4g0410111 Rosa chinensis HOM05D003177 ORTHO05D003481 5.6e-12 76.3 128 41.4
RcHm_v2.0_Chr5g0037541 Rosa chinensis HOM05D003177 ORTHO05D003481 5.6e-12 76.3 128 41.4
Solyc07g064110.3 Solanum lycopersicum HOM05D003177 ORTHO05D003481 5.6e-12 76.3 141 39.0
TWI39G1173 Tripterygium wilfordii HOM05D003177 ORTHO05D003481 5.6e-12 76.3 171 33.3
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 7.3e-12 75.9 103 40.8
Potri.011G133100 Populus trichocarpa HOM05D003177 ORTHO05D003481 7.3e-12 75.9 176 32.4
Gohir.D01G061200 Gossypium hirsutum HOM05D003177 ORTHO05D003481 9.5e-12 75.5 102 41.2
Gorai.002G082600 Gossypium raimondii HOM05D003177 ORTHO05D003481 9.5e-12 75.5 102 41.2
Medtr2g082940 Medicago truncatula HOM05D003177 ORTHO05D003481 1.2e-11 75.1 103 40.8
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 2.1e-11 74.3 140 39.3
TPR.G36746 Trifolium pratense HOM05D003177 ORTHO05D003481 2.1e-11 74.3 106 36.8
HPP92_004136 Vanilla planifolia HOM05D003177 ORTHO05D003481 2.1e-11 74.3 114 40.4
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 2.8e-11 73.9 146 33.6
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 2.8e-11 73.9 103 39.8
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 3.6e-11 73.6 120 39.2
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 4.7e-11 73.2 174 29.9
Ciclev10008519m.g Citrus clementina HOM05D003177 ORTHO05D003481 4.7e-11 73.2 150 34.0
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 6.1e-11 72.8 113 39.8
CAN.G337.89 Capsicum annuum HOM05D003177 ORTHO05D003481 6.1e-11 72.8 120 39.2
Manes.03G122901 Manihot esculenta HOM05D003177 ORTHO05D003481 6.1e-11 72.8 170 31.8
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 6.1e-11 72.8 170 31.8
Sabra16G0283700 Salix brachista HOM05D003177 ORTHO05D003481 6.1e-11 72.8 140 37.1
CsaV3_3G022860 Cucumis sativus L. HOM05D003177 ORTHO05D003481 1.4e-10 71.6 107 37.4
CsaV3_UNG228980 Cucumis sativus L. HOM05D003177 ORTHO05D003481 1.4e-10 71.6 107 37.4
Lalb_Chr19g0134751 Lupinus albus HOM05D003177 ORTHO05D003481 1.4e-10 71.6 118 39.8
ClCG05G014770 Citrullus lanatus HOM05D003177 ORTHO05D003481 1.8e-10 71.2 128 37.5
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 1.8e-10 71.2 160 34.4
Duzib213G0184 Durio zibethinus HOM05D003177 ORTHO05D003481 1.8e-10 71.2 164 31.7
THA.LOC104813041 Tarenaya hassleriana HOM05D003177 ORTHO05D003481 1.8e-10 71.2 106 45.3
Sed0011648 Sechium edule HOM05D003177 ORTHO05D003481 3.0e-10 70.5 107 37.4
arahy.Tifrunner.gnm1.ann1.LTHE3G Arachis hypogaea HOM05D003177 ORTHO05D003481 4.0e-10 70.1 106 39.6
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 4.0e-10 70.1 221 29.4
Eucgr.F03427 Eucalyptus grandis HOM05D003177 ORTHO05D003481 5.2e-10 69.7 122 36.9
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 5.2e-10 69.7 111 39.6
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 5.2e-10 69.7 140 36.4
arahy.Tifrunner.gnm1.ann1.2UU78P Arachis hypogaea HOM05D003177 ORTHO05D003481 6.8e-10 69.3 133 36.1
MELO3C018128.2 Cucumis melo HOM05D003177 ORTHO05D003481 6.8e-10 69.3 107 37.4
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 8.9e-10 68.9 112 37.5
Sc19g0005960 Simmondsia chinensis HOM05D003177 ORTHO05D003481 8.9e-10 68.9 76 44.7
FvH4_3g43110 Fragaria vesca HOM05D003177 ORTHO05D003481 1.2e-09 68.6 141 33.3
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 1.2e-09 68.6 325 27.7
FvH4_3g43180 Fragaria vesca HOM05D003177 ORTHO05D003481 1.5e-09 68.2 141 33.3
Sed0011296 Sechium edule HOM05D003177 ORTHO05D003481 2.0e-09 67.8 120 35.8
Glyma.12G214200 Glycine max HOM05D003177 ORTHO05D003481 2.6e-09 67.4 107 39.3
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 3.4e-09 67.0 101 39.6
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 3.4e-09 67.0 147 37.4
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 4.4e-09 66.6 129 32.6
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 4.4e-09 66.6 103 40.8
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.4e-09 66.6 103 40.8
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 5.8e-09 66.2 106 39.6
Carub.0006s3271 Capsella rubella HOM05D003177 ORTHO05D003481 5.8e-09 66.2 98 42.9
PSO675G6436 Papaver somniferum HOM05D003177 ORTHO05D003481 5.8e-09 66.2 126 34.9
arahy.Tifrunner.gnm1.ann1.JSI4TH Arachis hypogaea HOM05D003177 ORTHO05D003481 7.5e-09 65.9 133 35.3
TPR.G25924 Trifolium pratense HOM05D003177 ORTHO05D003481 7.5e-09 65.9 147 31.3
AL6G48280 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 9.8e-09 65.5 153 32.7
Cpa.g.sc97.66 Carica papaya HOM05D003177 ORTHO05D003481 9.8e-09 65.5 67 50.7
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 9.8e-09 65.5 137 38.0
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 1.3e-08 65.1 101 34.7
FAN21G1934 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.3e-08 65.1 141 32.6
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 1.3e-08 65.1 118 34.7
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 1.3e-08 65.1 101 36.6
AT4G04790 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 1.7e-08 64.7 153 32.0
PSO541G2106 Papaver somniferum HOM05D003177 ORTHO05D003481 1.7e-08 64.7 126 34.1
SHI50408 Sapria himalayana HOM05D003177 ORTHO05D003481 1.7e-08 64.7 130 32.3
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 2.2e-08 64.3 144 29.2
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.2e-08 64.3 103 39.8
BcaC04g21326 Brassica carinata HOM05D003177 ORTHO05D003481 2.9e-08 63.9 98 36.7
C09p33110 Brassica napus HOM05D003177 ORTHO05D003481 2.9e-08 63.9 98 36.7
BolC9t56146H Brassica oleracea HOM05D003177 ORTHO05D003481 2.9e-08 63.9 98 36.7
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.9e-08 63.9 137 37.2
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.7e-08 63.5 137 37.2
PSO478G2228 Papaver somniferum HOM05D003177 ORTHO05D003481 3.7e-08 63.5 133 35.3
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 3.7e-08 63.5 125 32.0
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea HOM05D003177 ORTHO05D003481 4.9e-08 63.2 148 33.1
Aa31LG9G9680 Aethionema arabicum HOM05D003177 ORTHO05D003481 6.4e-08 62.8 98 40.8
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 6.4e-08 62.8 121 38.0
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 6.4e-08 62.8 101 35.6
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 1.1e-07 62.0 121 38.0
AL7G32020 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 1.4e-07 61.6 98 36.7
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 1.4e-07 61.6 103 41.7
VMungo1127G0088 Vigna mungo HOM05D003177 ORTHO05D003481 1.4e-07 61.6 110 37.3
CDE12G0466 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 1.9e-07 61.2 71 43.7
Medtr7g007510 Medicago truncatula HOM05D003177 ORTHO05D003481 1.9e-07 61.2 175 28.6
AL1G67370 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 2.4e-07 60.8 95 38.9
Phvul.003G295700 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 2.4e-07 60.8 111 33.3
CARHR252740 Cardamine hirsuta HOM05D003177 ORTHO05D003481 3.2e-07 60.5 135 31.9
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 4.1e-07 60.1 121 37.2
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 4.1e-07 60.1 117 36.8
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 4.1e-07 60.1 101 34.7
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 4.1e-07 60.1 121 37.2
BraA01t01262Z Brassica rapa HOM05D003177 ORTHO05D003481 4.1e-07 60.1 117 36.8
FAN10G2257 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.1e-07 60.1 118 37.3
Os02g0132600 Oryza sativa ssp. japonica HOM05D003177 ORTHO05D003481 4.1e-07 60.1 105 37.1
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 7.0e-07 59.3 116 36.2
AL1G67350 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 9.2e-07 58.9 138 29.7
Lj4g0006066 Lotus japonicus HOM05D003177 ORTHO05D003481 2.0e-06 57.8 127 34.6
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 2.0e-06 57.8 117 37.6
AT4G21880 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 2.7e-06 57.4 99 40.4
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 3.5e-06 57.0 101 35.6
FAN21G2694 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.6e-06 56.6 101 39.6
Zm00001eb231370 Zea mays HOM05D003177 ORTHO05D003481 4.6e-06 56.6 120 32.5
Medtr7g025530 Medicago truncatula HOM05D003177 ORTHO05D003481 6.0e-06 56.2 94 38.3


User provided reference genes

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