Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 0.0e+00 1915.2 967 100.0
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 0.0e+00 1111.3 955 61.7
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 0.0e+00 1109.0 968 62.0
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 6.4e-281 971.1 1049 53.5
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.0e-278 963.8 979 57.1
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 3.2e-272 942.2 910 54.6
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 1.7e-270 936.4 903 56.3
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 5.1e-270 934.9 910 55.2
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 9.2e-264 914.1 976 50.9
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 5.6e-261 904.8 979 50.6
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 6.4e-257 891.3 948 51.6
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 5.1e-254 881.7 785 57.7
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 6.6e-254 881.3 909 52.7
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.5e-253 880.2 951 50.3
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 2.0e-250 869.8 910 52.7
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 9.9e-250 867.5 986 50.2
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 8.4e-249 864.4 896 53.1
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 2.4e-248 862.8 906 51.8
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 2.4e-248 862.8 909 51.7
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 4.2e-248 862.1 909 52.4
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 4.3e-245 852.0 907 51.6
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 4.8e-244 848.6 909 50.6
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 1.4e-243 847.0 916 49.8
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 1.4e-240 837.0 907 50.6
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 3.2e-240 835.9 936 49.1
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 7.9e-239 831.2 904 49.7
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 1.8e-238 830.1 863 52.0
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 5.1e-238 828.6 886 50.8
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 1.9e-237 826.6 920 49.3
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.9e-237 826.6 923 49.6
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 7.4e-237 824.7 909 50.6
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.1e-236 823.2 910 48.4
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 6.2e-236 821.6 911 49.7
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 3.1e-235 819.3 937 49.7
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 6.9e-235 818.1 969 47.8
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 6.9e-235 818.1 914 49.8
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 4.5e-234 815.5 970 48.4
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.3e-233 813.9 915 49.8
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 2.2e-233 813.1 940 47.7
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 1.1e-232 810.8 908 48.5
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 1.4e-232 810.4 913 49.1
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 2.7e-231 806.2 907 49.3
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.1e-229 800.8 909 48.0
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 3.8e-225 785.8 904 47.8
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 5.0e-225 785.4 918 46.9
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.2e-224 782.7 904 47.7
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 5.5e-224 781.9 914 47.5
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 2.5e-221 773.1 873 48.3
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.7e-220 769.2 904 47.2
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 4.8e-220 768.8 894 47.9
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.2e-220 768.1 904 47.1
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.5e-218 763.8 909 46.1
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 2.6e-218 763.1 910 47.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.5e-218 762.3 873 48.0
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 2.2e-217 760.0 922 47.6
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 3.8e-217 759.2 903 47.1
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 5.5e-216 755.4 872 47.7
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 5.5e-216 755.4 921 45.9
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 2.3e-214 750.0 910 46.3
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 3.1e-211 739.6 927 45.1
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 2.2e-209 733.4 904 46.0
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.1e-208 731.1 926 46.9
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.9e-208 730.3 871 47.2
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.9e-208 730.3 895 46.1
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 4.2e-208 729.2 908 45.4
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 3.1e-203 713.0 906 45.1
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 6.5e-201 705.3 926 43.3
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.0e-199 698.4 920 42.9
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.5e-197 694.1 883 43.6
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 2.6e-197 693.3 799 49.1
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.8e-195 687.2 920 44.1
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 1.8e-195 687.2 853 46.4
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 5.5e-192 675.6 1369 34.8
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 1.2e-191 674.5 960 41.9
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 3.0e-190 669.8 919 43.2
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.1e-184 651.4 875 43.9
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.5e-184 651.0 887 44.8
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 6.1e-183 645.6 875 41.8
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 5.9e-178 629.0 889 42.9
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.2e-175 621.3 701 48.4
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.1e-175 620.5 889 42.6
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 8.9e-174 615.1 782 46.3
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-173 614.0 889 42.1
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 1.3e-169 601.3 857 40.6
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.7e-169 600.9 1405 31.5
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 1.9e-168 597.4 904 40.0
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 5.6e-168 595.9 899 41.0
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 7.3e-168 595.5 899 41.0
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.4e-166 591.3 948 40.3
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 6.8e-166 589.0 899 40.9
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 8.9e-166 588.6 899 40.8
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 2.0e-165 587.4 899 40.8
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.5e-165 585.5 883 41.2
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 2.4e-163 580.5 875 40.8
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 3.2e-163 580.1 885 40.5
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 7.1e-163 578.9 749 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 1.2e-162 578.2 935 38.9
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 2.7e-162 577.0 874 40.3
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.6e-159 567.8 999 36.6
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 3.6e-159 566.6 901 39.7
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 1.8e-158 564.3 857 41.1
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 1.2e-157 561.6 943 38.3
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.2e-157 561.6 961 38.8
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 7.1e-155 552.4 844 41.4
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 6.6e-153 545.8 877 39.0
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 1.1e-150 538.5 889 39.0
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 1.4e-147 528.1 948 37.4
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.0e-145 521.9 995 35.5
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.6e-141 507.3 550 49.5
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.3e-137 495.0 489 52.4
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 5.8e-133 479.6 434 56.7
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.7e-130 470.7 930 36.6
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 2.1e-127 461.1 604 45.7
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 2.6e-125 454.1 899 34.6
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.3e-111 408.7 672 38.8
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.3e-111 408.7 467 46.9
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 1.7e-103 381.7 363 55.6
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.1e-102 377.5 361 54.8
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 1.4e-97 362.1 350 54.9
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 1.5e-91 342.0 448 44.2
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 1.4e-89 335.5 1095 27.2
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 3.0e-89 334.3 816 30.9
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 1.8e-86 325.1 338 52.4
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 6.5e-84 316.6 387 44.2
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-80 305.4 546 36.8
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 2.0e-77 295.0 409 40.8
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 1.3e-76 292.4 271 55.4
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 9.4e-75 286.2 356 45.5
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 6.8e-73 280.0 429 42.7
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.5e-72 278.9 620 33.1
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.7e-71 275.4 394 43.1
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 3.7e-71 274.2 496 36.3
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 9.1e-70 269.6 401 39.9
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 2.7e-69 268.1 843 27.5
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 1.2e-64 252.7 195 64.6
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 3.2e-62 244.6 281 48.8
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 1.3e-55 222.6 249 45.4
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.9e-54 218.8 177 62.7
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.4e-54 218.4 388 36.9
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 9.2e-54 216.5 261 46.0
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.2e-53 216.1 172 61.6
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 4.1e-46 191.0 289 38.1
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 1.0e-44 186.4 329 35.0
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 1.3e-44 186.0 351 36.8
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 6.8e-41 173.7 185 49.7
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.1e-35 156.4 139 56.1
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.5e-35 156.0 336 32.4
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.8e-33 149.1 359 33.1
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.4e-32 144.8 157 45.9
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.4e-30 138.7 119 57.1
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 9.3e-30 136.7 242 38.0
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.0e-28 133.3 103 61.2
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 1.4e-25 122.9 90 65.6
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.1e-25 121.7 171 38.0
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 5.3e-25 120.9 89 67.4
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 6.9e-25 120.6 183 40.4
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 9.9e-24 116.7 204 35.8
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 6.4e-23 114.0 85 60.0
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 6.4e-23 114.0 84 61.9
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 8.4e-23 113.6 240 36.7
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 1.1e-22 113.2 163 39.9
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 2.7e-21 108.6 136 42.6
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 2.7e-21 108.6 126 44.4
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 3.5e-21 108.2 150 44.7
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.5e-21 108.2 80 66.2
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 9.6e-19 100.1 116 46.6
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.9e-15 88.6 125 41.6
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 1.4e-14 86.3 119 43.7
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 1.6e-13 82.8 178 39.9
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 7.9e-13 80.5 87 54.0
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 2.3e-12 79.0 103 44.7
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 8.7e-12 77.0 58 56.9
Lj9A422T78 Lonicera japonica HOM05D003469 ORTHO05D029064 1.9e-11 75.9 87 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis HOM05D003469 ORTHO05D004084 2.5e-11 75.5 96 39.6
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 2.1e-10 72.4 115 35.7
Lsat_1_v5_gn_6_14080 Lactuca sativa HOM05D002718 ORTHO05D004084 3.7e-10 71.6 67 50.7
Cc00_g33310 Coffea canephora HOM05D003469 ORTHO05D029064 7.6e-08 63.9 106 39.6
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 6.5e-07 60.8 82 36.6
MCO03G148 Micromonas commoda HOM05D003469 ORTHO05D004084 1.9e-06 59.3 82 39.0
QL01p054481 Quercus lobata HOM05D003469 ORTHO05D004084 2.5e-06 58.9 48 56.2


User provided reference genes

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