Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 2.4e-176 622.1 322 100.0
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 3.0e-49 199.9 281 48.4
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 4.0e-46 189.5 300 43.3
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 1.1e-43 181.4 292 41.1
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 1.9e-40 170.6 307 41.7
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 3.9e-33 146.4 323 36.8
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 9.6e-32 141.7 339 33.3
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.6e-31 139.8 287 38.7
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 4.0e-30 136.3 284 35.9
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 5.3e-30 136.0 280 35.7
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 9.0e-30 135.2 323 33.4
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 2.6e-29 133.7 323 35.0
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 3.4e-29 133.3 323 34.1
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 7.6e-29 132.1 274 37.6
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 7.6e-29 132.1 274 37.6
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.7e-28 131.0 274 37.2
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.7e-28 131.0 301 35.2
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.2e-28 130.6 274 37.6
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 2.2e-28 130.6 320 34.4
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 2.9e-28 130.2 325 32.3
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 3.8e-28 129.8 320 33.8
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 3.8e-28 129.8 277 36.5
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 6.4e-28 129.0 293 34.1
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 8.4e-28 128.6 320 34.4
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.1e-27 128.3 274 36.9
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 1.4e-27 127.9 274 36.9
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 2.4e-27 127.1 275 37.1
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 2.4e-27 127.1 281 35.6
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 2.4e-27 127.1 280 36.1
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 3.2e-27 126.7 277 34.7
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 4.2e-27 126.3 282 33.0
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 1.2e-26 124.8 335 33.4
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.1e-26 124.0 323 35.3
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 3.5e-26 123.2 290 33.4
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 4.6e-26 122.9 279 36.2
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 4.6e-26 122.9 293 34.8
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 6.0e-26 122.5 303 31.0
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 6.0e-26 122.5 290 32.8
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 6.0e-26 122.5 243 38.7
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 1.0e-25 121.7 320 33.1
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.8e-25 120.9 333 32.7
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.3e-25 120.6 247 38.5
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 3.9e-25 119.8 280 32.5
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 8.7e-25 118.6 290 34.1
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 1.5e-24 117.9 337 31.8
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 4.3e-24 116.3 285 33.3
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 4.3e-24 116.3 236 37.7
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 4.3e-24 116.3 225 39.6
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 9.6e-24 115.2 328 32.6
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 1.3e-23 114.8 317 34.4
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 4.8e-23 112.8 290 31.4
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 6.2e-23 112.5 283 32.9
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 6.2e-23 112.5 273 33.0
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 1.1e-22 111.7 276 32.6
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 1.8e-22 110.9 277 33.2
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 3.1e-22 110.2 326 31.0
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 4.0e-22 109.8 266 33.5
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 5.3e-22 109.4 300 32.7
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 9.0e-22 108.6 283 30.7
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 2.0e-21 107.5 265 33.6
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 3.4e-21 106.7 299 29.1
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 3.4e-21 106.7 245 31.4
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 3.4e-21 106.7 310 31.0
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 1.7e-20 104.4 287 30.3
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 1.7e-20 104.4 225 33.8
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 1.7e-20 104.4 329 31.0
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 3.8e-20 103.2 312 30.8
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 8.4e-20 102.1 281 30.2
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 1.1e-19 101.7 318 30.8
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.1e-19 101.7 278 34.5
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 1.4e-19 101.3 223 35.4
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 1.9e-19 100.9 309 30.7
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 2.4e-19 100.5 252 34.1
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 2.4e-19 100.5 299 31.1
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 3.2e-19 100.1 314 28.7
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 5.5e-19 99.4 309 30.7
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 1.2e-18 98.2 280 28.6
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 1.6e-18 97.8 292 31.2
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 3.5e-18 96.7 284 29.9
SalBow3G1978 Salvia bowleyana HOM05D005648 ORTHO05D007357 1.8e-17 94.4 115 50.4
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 2.3e-17 94.0 276 29.7
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 2.3e-17 94.0 227 34.4
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 3.9e-17 93.2 186 37.6
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 5.1e-17 92.8 307 27.4
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 5.1e-17 92.8 281 28.1
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 1.1e-16 91.7 290 28.6
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 1.5e-16 91.3 122 40.2
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 1.9e-16 90.9 334 26.9
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 4.3e-16 89.7 244 29.9
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 5.6e-16 89.4 301 27.6
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 7.4e-16 89.0 236 36.0
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 7.4e-16 89.0 276 28.6
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 1.3e-15 88.2 271 28.0
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 1.8e-14 84.3 305 26.6
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 9.0e-14 82.0 140 34.3
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 9.0e-14 82.0 224 33.5
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.5e-13 81.3 226 29.6
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 3.4e-13 80.1 290 27.9
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 4.5e-13 79.7 321 28.3
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 7.6e-13 79.0 325 29.8
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 2.9e-12 77.0 63 57.1
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 3.8e-12 76.6 305 26.6
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 4.9e-12 76.3 261 28.4
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 6.5e-12 75.9 111 52.3
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 8.4e-12 75.5 301 25.9
CSS0016999 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 2.5e-11 73.9 129 45.7
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 3.2e-11 73.6 320 25.6
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 4.2e-11 73.2 90 43.3
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 9.3e-11 72.0 320 25.6
arahy.Tifrunner.gnm1.ann1.QHU48Z Arachis hypogaea HOM05D005648 ORTHO05D007357 1.2e-10 71.6 113 34.5
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 1.6e-10 71.2 321 25.5
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 2.7e-10 70.5 317 25.6
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 3.5e-10 70.1 317 24.0
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.3e-09 68.2 112 46.4
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.5e-08 63.9 150 31.3
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 4.3e-08 63.2 274 25.5
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 9.6e-08 62.0 46 63.0
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 1.6e-07 61.2 97 33.0
FAN10G0802 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.8e-07 60.5 122 41.8
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.8e-07 60.5 64 50.0
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 6.9e-06 55.8 44 59.1


User provided reference genes

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