Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9672 Utricularia gibba HOM05D005429 ORTHO05D006697 8.7e-71 270.4 156 100.0
unitig_749.g13420 Utricularia gibba HOM05D005429 ORTHO05D006697 1.2e-48 196.8 156 79.5
Lj7A456T20 Lonicera japonica HOM05D005429 ORTHO05D006697 3.2e-41 172.2 145 69.7
ECA238G3108 Erigeron canadensis HOM05D005429 ORTHO05D006697 4.2e-41 171.8 145 69.7
MSTRG.26291 Avicennia marina HOM05D005429 ORTHO05D006697 5.5e-41 171.4 126 69.0
DCAR_027354 Daucus carota HOM05D005429 ORTHO05D006697 2.1e-40 169.5 124 67.7
SGA_v2.0_scaffold147G36309 Striga asiatica HOM05D005429 ORTHO05D006697 2.1e-40 169.5 130 67.7
CSS0004524 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 4.6e-40 168.3 120 69.2
Nitab4.5_0009812g0020 Nicotiana tabacum HOM05D005429 ORTHO05D006697 7.9e-40 167.5 119 70.6
vmacro06089 Vaccinium macrocarpon HOM05D005429 ORTHO05D006697 1.3e-39 166.8 119 69.7
Nitab4.5_0000548g0210 Nicotiana tabacum HOM05D005429 ORTHO05D006697 1.8e-39 166.4 145 69.0
SGA_v2.0_scaffold19G08578 Striga asiatica HOM05D005429 ORTHO05D006697 2.3e-39 166.0 119 68.9
CSS0015948 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 3.0e-39 165.6 118 69.5
CSS0034504 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 3.0e-39 165.6 118 69.5
CiPaw.05G164700 Carya illinoinensis HOM05D005429 ORTHO05D006697 3.0e-39 165.6 119 69.7
PGSC0003DMG400009083 Solanum tuberosum HOM05D005429 ORTHO05D006697 3.0e-39 165.6 119 69.7
Dinv42877 Davidia involucrata HOM05D005429 ORTHO05D006697 3.9e-39 165.2 129 67.4
Dinv43223 Davidia involucrata HOM05D005429 ORTHO05D006697 3.9e-39 165.2 129 67.4
Rhsim03G0256400 Rhododendron simsii HOM05D005429 ORTHO05D006697 3.9e-39 165.2 126 67.5
Rhsim10G0195600 Rhododendron simsii HOM05D005429 ORTHO05D006697 3.9e-39 165.2 126 67.5
Aqoxy3G02759 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 5.1e-39 164.9 120 70.0
Solyc03g083300.3 Solanum lycopersicum HOM05D005429 ORTHO05D006697 5.1e-39 164.9 119 69.7
Sopen03g023050 Solanum pennellii HOM05D005429 ORTHO05D006697 5.1e-39 164.9 119 69.7
Migut.N01785 Erythranthe guttata HOM05D005429 ORTHO05D006697 6.7e-39 164.5 118 69.5
TWI18G1141 Tripterygium wilfordii HOM05D005429 ORTHO05D006697 6.7e-39 164.5 120 67.5
TAR624G1317 Trochodendron aralioides HOM05D005429 ORTHO05D006697 6.7e-39 164.5 128 67.2
Cc02_g22920 Coffea canephora HOM05D005429 ORTHO05D006697 1.1e-38 163.7 154 66.2
GSVIVG01036692001 Vitis vinifera HOM05D005429 ORTHO05D006697 1.9e-38 162.9 126 65.9
Eucgr.C03287 Eucalyptus grandis HOM05D005429 ORTHO05D006697 2.5e-38 162.5 128 64.1
Dinv44073 Davidia involucrata HOM05D005429 ORTHO05D006697 4.3e-38 161.8 127 66.1
Actinidia23548 Actinidia chinensis HOM05D005429 ORTHO05D006697 5.7e-38 161.4 117 68.4
Eucgr.C04279 Eucalyptus grandis HOM05D005429 ORTHO05D006697 5.7e-38 161.4 128 64.1
Lsat_1_v5_gn_2_59100 Lactuca sativa HOM05D005429 ORTHO05D006697 5.7e-38 161.4 149 65.8
Eucgr.F00079 Eucalyptus grandis HOM05D005429 ORTHO05D006697 7.4e-38 161.0 128 63.3
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 7.4e-38 161.0 127 67.7
Prupe.7G260300 Prunus persica HOM05D005429 ORTHO05D006697 7.4e-38 161.0 119 68.1
EL10Ac5g12584 Beta vulgaris HOM05D005429 ORTHO05D006697 2.2e-37 159.5 128 61.7
Gorai.005G075400 Gossypium raimondii HOM05D005429 ORTHO05D006697 2.8e-37 159.1 122 65.6
LjContig00222g0019384 Lotus japonicus HOM05D005429 ORTHO05D006697 2.8e-37 159.1 147 67.3
Psat1g130720 Pisum sativum HOM05D005429 ORTHO05D006697 2.8e-37 159.1 137 69.3
AUR62030412 Chenopodium quinoa HOM05D005429 ORTHO05D006697 3.7e-37 158.7 132 62.1
Peaxi162Scf03254g00010 Petunia axillaris HOM05D005429 ORTHO05D006697 3.7e-37 158.7 127 66.9
Potri.008G080700 Populus trichocarpa HOM05D005429 ORTHO05D006697 4.8e-37 158.3 119 66.4
Glyma.15G204300 Glycine max HOM05D005429 ORTHO05D006697 6.3e-37 157.9 142 67.6
Medtr2g062860 Medicago truncatula HOM05D005429 ORTHO05D006697 6.3e-37 157.9 137 70.1
PSO384G3609 Papaver somniferum HOM05D005429 ORTHO05D006697 8.2e-37 157.5 145 65.5
AUR62006203 Chenopodium quinoa HOM05D005429 ORTHO05D006697 1.1e-36 157.1 132 61.4
Cpa.g.sc16.3 Carica papaya HOM05D005429 ORTHO05D006697 1.4e-36 156.8 120 65.0
HanXRQChr14g0437971 Helianthus annuus HOM05D005429 ORTHO05D006697 1.8e-36 156.4 145 64.8
Ca_03324_v3 Cicer arietinum L. HOM05D005429 ORTHO05D006697 2.4e-36 156.0 137 68.6
Manes.03G077300 Manihot esculenta HOM05D005429 ORTHO05D006697 2.4e-36 156.0 120 65.8
PSO832G0230 Papaver somniferum HOM05D005429 ORTHO05D006697 2.4e-36 156.0 145 60.0
Gohir.D02G066500 Gossypium hirsutum HOM05D005429 ORTHO05D006697 3.1e-36 155.6 117 66.7
Cfa010706 Carpinus fangiana HOM05D005429 ORTHO05D006697 4.1e-36 155.2 118 66.9
Phvul.005G043700 Phaseolus vulgaris HOM05D005429 ORTHO05D006697 5.3e-36 154.8 117 65.0
QL11p022585 Quercus lobata HOM05D005429 ORTHO05D006697 9.0e-36 154.1 119 65.5
THA.LOC104812397 Tarenaya hassleriana HOM05D005429 ORTHO05D006697 9.0e-36 154.1 120 65.0
ClCG11G011870 Citrullus lanatus HOM05D005429 ORTHO05D006697 1.2e-35 153.7 128 63.3
Glyma.08G160100 Glycine max HOM05D005429 ORTHO05D006697 1.2e-35 153.7 120 64.2
COL.COLO4_05834 Corchorus olitorius HOM05D005429 ORTHO05D006697 1.5e-35 153.3 114 67.5
Duzib116G0688 Durio zibethinus HOM05D005429 ORTHO05D006697 1.5e-35 153.3 117 65.8
Lalb_Chr01g0015641 Lupinus albus HOM05D005429 ORTHO05D006697 1.5e-35 153.3 145 64.8
PSO210G6955 Papaver somniferum HOM05D005429 ORTHO05D006697 1.5e-35 153.3 147 61.9
PSO339G4006 Papaver somniferum HOM05D005429 ORTHO05D006697 2.0e-35 152.9 145 62.1
Ciclev10022715m.g Citrus clementina HOM05D005429 ORTHO05D006697 2.6e-35 152.5 118 63.6
CsaV3_1G046300 Cucumis sativus L. HOM05D005429 ORTHO05D006697 2.6e-35 152.5 128 62.5
RcHm_v2.0_Chr5g0022991 Rosa chinensis HOM05D005429 ORTHO05D006697 2.6e-35 152.5 126 61.1
Thecc.08G200900 Theobroma cacao HOM05D005429 ORTHO05D006697 2.6e-35 152.5 117 66.7
Aa31LG7G970 Aethionema arabicum HOM05D005429 ORTHO05D006697 3.4e-35 152.1 120 63.3
MELO3C021751.2 Cucumis melo HOM05D005429 ORTHO05D006697 3.4e-35 152.1 117 65.8
Sc16g0002320 Simmondsia chinensis HOM05D005429 ORTHO05D006697 3.4e-35 152.1 125 61.6
AL1G18280 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 4.5e-35 151.8 120 63.3
Gohir.A02G061000 Gossypium hirsutum HOM05D005429 ORTHO05D006697 5.9e-35 151.4 121 63.6
PGR083G0776 Punica granatum HOM05D005429 ORTHO05D006697 5.9e-35 151.4 120 63.3
Thecc.05G251100 Theobroma cacao HOM05D005429 ORTHO05D006697 5.9e-35 151.4 117 65.8
AL1G28560 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 7.7e-35 151.0 120 62.5
arahy.Tifrunner.gnm1.ann1.9U3PF1 Arachis hypogaea HOM05D005429 ORTHO05D006697 7.7e-35 151.0 117 65.0
arahy.Tifrunner.gnm1.ann1.WT0EG6 Arachis hypogaea HOM05D005429 ORTHO05D006697 7.7e-35 151.0 117 65.0
VMungo1080G0054 Vigna mungo HOM05D005429 ORTHO05D006697 7.7e-35 151.0 117 63.2
ATR0019G018 Amborella trichopoda HOM05D005429 ORTHO05D006697 1.3e-34 150.2 120 64.2
FAN21G1331 Fragaria x ananassa HOM05D005429 ORTHO05D006697 1.3e-34 150.2 126 60.3
TPR.G39484 Trifolium pratense HOM05D005429 ORTHO05D006697 1.3e-34 150.2 137 65.0
DCAR_014816 Daucus carota HOM05D005429 ORTHO05D006697 1.7e-34 149.8 145 55.9
AT1G07950 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 2.2e-34 149.4 120 61.7
BcaB02g06622 Brassica carinata HOM05D005429 ORTHO05D006697 2.2e-34 149.4 149 63.8
FvH4_3g13800 Fragaria vesca HOM05D005429 ORTHO05D006697 2.2e-34 149.4 126 60.3
FAN11G0784 Fragaria x ananassa HOM05D005429 ORTHO05D006697 2.2e-34 149.4 126 60.3
CANSAT56G3386 Cannabis sativa HOM05D005429 ORTHO05D006697 2.9e-34 149.1 124 59.7
CARHR016900 Cardamine hirsuta HOM05D005429 ORTHO05D006697 2.9e-34 149.1 120 61.7
FAN16G2737 Fragaria x ananassa HOM05D005429 ORTHO05D006697 2.9e-34 149.1 126 60.3
Sed0018631 Sechium edule HOM05D005429 ORTHO05D006697 2.9e-34 149.1 124 62.9
AT1G16430 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 3.8e-34 148.7 124 61.3
HPP92_024623 Vanilla planifolia HOM05D005429 ORTHO05D006697 3.8e-34 148.7 120 61.7
CDE02G4404 Ceratophyllum demersum HOM05D005429 ORTHO05D006697 5.0e-34 148.3 127 59.1
Peaxi162Scf00003g03942 Petunia axillaris HOM05D005429 ORTHO05D006697 5.0e-34 148.3 127 63.8
Ah.04g163250 Amaranthus hybridus HOM05D005429 ORTHO05D006697 8.5e-34 147.5 119 61.3
Carub.0001s0730 Capsella rubella HOM05D005429 ORTHO05D006697 8.5e-34 147.5 120 60.8
Hund11041 Selenicereus undatus HOM05D005429 ORTHO05D006697 1.1e-33 147.1 127 59.1
FAN25G2434 Fragaria x ananassa HOM05D005429 ORTHO05D006697 1.4e-33 146.7 125 60.0
Sp1g14580 Schrenkiella parvula HOM05D005429 ORTHO05D006697 2.5e-33 146.0 120 61.7
BcaC05g25573 Brassica carinata HOM05D005429 ORTHO05D006697 5.5e-33 144.8 120 60.0
A06p12360 Brassica napus HOM05D005429 ORTHO05D006697 5.5e-33 144.8 120 60.0
C05p14630 Brassica napus HOM05D005429 ORTHO05D006697 5.5e-33 144.8 120 60.0
BolC5t30184H Brassica oleracea HOM05D005429 ORTHO05D006697 5.5e-33 144.8 120 60.0
BraA06t24400Z Brassica rapa HOM05D005429 ORTHO05D006697 5.5e-33 144.8 120 60.0
Sabra08G0060000 Salix brachista HOM05D005429 ORTHO05D006697 5.5e-33 144.8 117 61.5
Nn4g23117 Nelumbo nucifera HOM05D005429 ORTHO05D006697 7.2e-33 144.4 117 64.1
Atru.chr3.2997 Acer truncatum HOM05D005429 ORTHO05D006697 1.6e-32 143.3 132 58.3
Thhalv10008938m.g Eutrema salsugineum HOM05D005429 ORTHO05D006697 3.6e-32 142.1 134 56.7
SEGI_11251 Sequoiadendron giganteum HOM05D005429 ORTHO05D006697 4.6e-32 141.7 147 51.0
Oeu051694.1 Olea europaea HOM05D005429 ORTHO05D006697 1.0e-31 140.6 111 67.6
Carub.0001s1617 Capsella rubella HOM05D005429 ORTHO05D006697 3.0e-31 139.0 120 59.2
Os08g0480500 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 5.1e-31 138.3 125 54.4
Zm00001eb335330 Zea mays HOM05D005429 ORTHO05D006697 2.0e-30 136.3 150 59.3
Mapoly0161s0019 Marchantia polymorpha HOM05D005429 ORTHO05D006697 4.8e-29 131.7 127 56.7
Hma1.2p1_0817F.1_g223090 Hydrangea macrophylla HOM05D005429 ORTHO05D006697 8.2e-29 131.0 148 60.1
Eucgr.C04273 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.4e-28 130.2 96 67.7
Peaxi162Scf00003g04025 Petunia axillaris HOM05D005429 ORTHO05D006697 1.4e-28 130.2 103 65.0
Haze_03266 Corylus avellana HOM05D005429 ORTHO05D006697 2.4e-28 129.4 92 70.7
QL02p100061 Quercus lobata HOM05D005429 ORTHO05D006697 1.0e-26 124.0 190 41.6
Haze_03271 Corylus avellana HOM05D005429 ORTHO05D001402 2.9e-26 122.5 93 65.6
Os01g0132700 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 2.9e-26 122.5 125 49.6
QL04p071374 Quercus lobata HOM05D005429 ORTHO05D006697 8.5e-26 120.9 92 66.3
Pp3c20_1390 Physcomitrium patens HOM05D005429 ORTHO05D006697 1.1e-25 120.6 119 53.8
Pp3c24_19620 Physcomitrium patens HOM05D005429 ORTHO05D006697 1.4e-25 120.2 129 52.7
Peaxi162Scf03393g00016 Petunia axillaris HOM05D005429 ORTHO05D006697 1.9e-25 119.8 94 66.0
MD02G1009700 Malus domestica HOM05D005429 ORTHO05D006697 3.2e-25 119.0 119 52.1
SMO141G0142 Selaginella moellendorffii HOM05D005429 ORTHO05D006697 3.3e-22 109.0 119 52.1
Aqoxy3G02314 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 1.7e-21 106.7 100 58.0
AagrBONN_evm.TU.Sc2ySwM_117.1673 Anthoceros agrestis HOM05D005429 ORTHO05D006697 3.1e-20 102.4 121 45.5
Oeu050474.1 Olea europaea HOM05D005429 ORTHO05D006697 1.2e-19 100.5 94 54.3
CAN.G1618.6 Capsicum annuum HOM05D005429 ORTHO05D006697 3.8e-18 95.5 85 56.5
CAN.G584.55 Capsicum annuum HOM05D005429 ORTHO05D006697 3.8e-18 95.5 85 56.5
Eucgr.L02967 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.3e-13 80.5 98 46.9
Eucgr.C04269 Eucalyptus grandis HOM05D005429 ORTHO05D006697 8.2e-13 77.8 98 49.0
Peaxi162Scf03393g00018 Petunia axillaris HOM05D005429 ORTHO05D006697 1.1e-12 77.4 64 57.8
SGA_v2.0_scaffold19G08613 Striga asiatica HOM05D005429 ORTHO05D006697 2.0e-11 73.2 79 57.0
SGA_v2.0_scaffold19G08607 Striga asiatica HOM05D005429 ORTHO05D006697 5.9e-11 71.6 79 55.7
SGA_v2.0_scaffold711G53500 Striga asiatica HOM05D005429 ORTHO05D006697 5.9e-11 71.6 79 55.7
Zm00001eb228470 Zea mays HOM05D005429 ORTHO05D006697 2.7e-08 62.8 52 57.7


User provided reference genes

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