Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 6.8e-109 397.5 225 100.0
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 5.6e-63 245.0 215 64.2
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 2.0e-60 236.5 227 60.8
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 2.0e-60 236.5 219 60.7
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 5.8e-60 235.0 211 60.7
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 7.6e-60 234.6 227 60.4
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 6.0e-57 224.9 212 60.4
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 1.5e-55 220.3 225 60.9
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 4.3e-55 218.8 228 57.5
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 9.6e-55 217.6 212 57.1
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 9.6e-55 217.6 212 60.4
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 2.8e-54 216.1 228 56.1
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 3.6e-54 215.7 215 57.2
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 8.1e-54 214.5 219 55.7
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 1.4e-53 213.8 216 56.9
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.8e-53 213.4 219 58.9
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.1e-53 212.6 218 60.1
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 4.0e-53 212.2 217 59.0
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 4.0e-53 212.2 244 53.7
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 6.9e-53 211.5 219 58.9
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 6.9e-53 211.5 219 58.4
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 1.5e-52 210.3 216 56.0
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 1.5e-52 210.3 212 57.5
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 2.0e-52 209.9 217 54.8
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 2.6e-52 209.5 219 54.8
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 3.4e-52 209.1 219 56.2
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 5.8e-52 208.4 221 57.0
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 1.7e-51 206.8 246 49.2
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 3.8e-51 205.7 226 55.8
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 4.9e-51 205.3 218 56.9
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 1.4e-50 203.8 216 56.5
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 2.4e-50 203.0 217 56.2
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 3.2e-50 202.6 218 54.6
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.2e-50 202.6 223 55.6
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 4.2e-50 202.2 225 53.8
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 7.1e-50 201.4 232 54.3
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 9.3e-50 201.1 218 57.3
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.6e-49 200.3 217 54.8
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 2.7e-49 199.5 217 55.8
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.7e-49 199.5 218 53.7
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 3.5e-49 199.1 226 54.4
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 3.5e-49 199.1 218 54.6
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.3e-48 197.2 237 53.2
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.8e-48 196.8 217 57.1
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 2.3e-48 196.4 214 54.7
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 2.3e-48 196.4 235 56.2
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 3.0e-48 196.1 217 56.2
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 6.7e-48 194.9 217 56.7
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 1.1e-47 194.1 217 55.8
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 5.6e-47 191.8 226 53.5
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 9.6e-47 191.0 227 51.1
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 1.6e-46 190.3 328 40.9
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.7e-46 189.1 218 53.2
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 8.1e-46 188.0 247 50.2
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 8.1e-46 188.0 217 53.5
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 1.4e-45 187.2 219 51.1
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 5.3e-45 185.3 203 54.2
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 6.9e-45 184.9 229 52.4
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 1.5e-44 183.7 223 51.6
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 1.5e-44 183.7 216 51.9
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 2.0e-44 183.3 216 52.8
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 4.5e-44 182.2 260 46.5
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 1.0e-43 181.0 215 53.0
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.3e-43 180.6 207 58.5
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.3e-43 180.6 207 58.5
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 1.7e-43 180.3 231 51.9
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 4.9e-43 178.7 224 48.7
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 6.5e-43 178.3 221 50.2
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 8.4e-43 177.9 212 50.9
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 8.4e-43 177.9 225 48.9
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 1.4e-42 177.2 230 49.6
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 1.9e-42 176.8 215 52.1
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 1.9e-42 176.8 220 50.0
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 2.5e-42 176.4 215 52.1
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 3.2e-42 176.0 238 51.7
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 4.2e-42 175.6 216 50.0
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 1.2e-41 174.1 223 49.8
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 1.6e-41 173.7 223 50.7
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 3.5e-41 172.6 216 51.4
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 3.5e-41 172.6 224 53.6
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 4.6e-41 172.2 167 57.5
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 4.6e-41 172.2 167 57.5
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 6.0e-41 171.8 216 50.9
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 7.9e-41 171.4 212 51.4
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 1.0e-40 171.0 212 51.4
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 1.0e-40 171.0 220 48.2
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 2.3e-40 169.9 205 48.8
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 3.9e-40 169.1 211 49.3
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 6.7e-40 168.3 212 50.0
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 1.1e-39 167.5 230 48.3
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 1.1e-39 167.5 212 50.0
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 1.1e-39 167.5 212 50.0
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 2.5e-39 166.4 225 49.8
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 3.3e-39 166.0 216 51.9
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 3.3e-39 166.0 210 50.0
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 4.3e-39 165.6 217 49.3
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 5.7e-39 165.2 221 50.7
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 9.6e-39 164.5 209 48.3
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 1.6e-38 163.7 213 47.4
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 1.6e-38 163.7 231 47.6
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 2.8e-38 162.9 222 52.3
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 2.8e-38 162.9 216 46.8
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 8.2e-38 161.4 225 47.1
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 1.1e-37 161.0 213 47.9
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 3.1e-37 159.5 218 49.5
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 4.1e-37 159.1 223 46.2
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 1.2e-36 157.5 217 47.5
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 2.6e-36 156.4 174 54.0
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 8.4e-35 151.4 213 48.8
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 8.4e-35 151.4 217 47.5
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 8.4e-35 151.4 213 48.8
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 8.4e-35 151.4 213 48.8
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 8.4e-35 151.4 217 47.5
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 3.2e-34 149.4 213 48.4
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 7.2e-34 148.3 215 46.5
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 1.6e-33 147.1 225 44.4
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 7.9e-33 144.8 216 46.8
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 1.8e-32 143.7 222 47.3
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 5.7e-31 138.7 226 45.6
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 3.7e-30 136.0 192 48.4
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 1.1e-29 134.4 209 50.2
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.4e-29 133.3 256 38.3
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.4e-29 133.3 256 38.3
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 2.0e-28 130.2 218 40.4
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 2.6e-28 129.8 158 50.6
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 3.8e-27 125.9 317 36.6
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 3.2e-26 122.9 160 48.8
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 1.6e-25 120.6 87 72.4
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 7.7e-20 101.7 244 35.7
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 1.0e-19 101.3 103 57.3
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 1.7e-19 100.5 156 44.2
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 5.5e-18 95.5 152 41.4
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 1.6e-17 94.0 201 36.8
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 3.6e-17 92.8 166 42.2
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 1.8e-16 90.5 89 56.2
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 3.9e-16 89.4 148 42.6
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 7.0e-13 78.6 133 44.4
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 3.6e-09 66.2 39 79.5
CSS0012117 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 8.0e-09 65.1 45 73.3
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 1.0e-08 64.7 88 40.9
CSS0018254 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.8e-08 63.9 45 73.3
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 3.0e-08 63.2 147 35.4
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 8.8e-08 61.6 82 45.1
Cre06.g279250 Chlamydomonas reinhardtii HOM05D004799 ORTHO05D005500 2.0e-07 60.5 204 29.4
Lsat_1_v5_gn_2_102640 Lactuca sativa HOM05D004799 ORTHO05D005500 4.8e-06 55.8 64 54.7
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 6.3e-06 55.5 82 45.1


User provided reference genes

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