Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 1.8e-262 908.7 445 100.0
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 5.0e-196 688.0 462 74.9
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 7.9e-194 680.6 461 74.2
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.0e-193 680.2 462 74.0
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.3e-191 673.3 468 72.0
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 2.2e-191 672.5 464 73.1
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 3.7e-191 671.8 471 72.2
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 8.2e-191 670.6 461 73.3
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.8e-190 669.5 461 72.2
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 4.1e-190 668.3 466 72.1
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 5.3e-190 667.9 462 72.7
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 9.1e-190 667.2 462 71.6
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 4.5e-189 664.8 461 72.0
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 4.5e-189 664.8 465 72.3
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 5.9e-189 664.5 461 72.5
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.0e-188 663.7 461 71.8
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 1.7e-188 662.9 463 72.4
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 1.7e-188 662.9 461 71.1
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 2.2e-188 662.5 461 71.6
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 2.2e-188 662.5 461 72.0
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 2.9e-188 662.1 466 71.9
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 2.9e-188 662.1 466 71.9
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 3.8e-188 661.8 459 72.5
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 6.5e-188 661.0 466 70.8
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 8.5e-188 660.6 461 72.2
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 8.5e-188 660.6 464 72.2
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 8.5e-188 660.6 449 74.4
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.1e-187 660.2 461 72.0
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 1.1e-187 660.2 464 71.6
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 1.1e-187 660.2 461 72.2
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.4e-187 659.8 465 71.8
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 1.4e-187 659.8 463 70.6
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.9e-187 659.4 463 71.3
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.5e-187 659.1 465 71.4
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 3.2e-187 658.7 460 73.0
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 3.2e-187 658.7 465 71.8
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 3.2e-187 658.7 465 71.8
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 4.2e-187 658.3 463 69.8
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 4.2e-187 658.3 463 71.9
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 5.5e-187 657.9 461 72.2
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 5.5e-187 657.9 467 71.7
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 5.5e-187 657.9 461 71.4
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 5.5e-187 657.9 465 71.0
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 7.2e-187 657.5 462 72.1
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 9.4e-187 657.1 465 71.0
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 1.2e-186 656.8 465 71.8
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 1.2e-186 656.8 466 70.2
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 2.1e-186 656.0 456 71.9
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 2.1e-186 656.0 464 70.7
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 2.7e-186 655.6 461 71.6
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 2.7e-186 655.6 461 71.4
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 2.7e-186 655.6 462 71.0
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 3.6e-186 655.2 462 71.2
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 4.7e-186 654.8 459 71.2
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 1.8e-185 652.9 445 73.7
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 2.3e-185 652.5 463 70.4
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 3.0e-185 652.1 464 70.3
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 5.1e-185 651.4 467 70.0
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 2.0e-184 649.4 461 71.6
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 2.6e-184 649.0 479 68.7
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 3.3e-184 648.7 462 69.9
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 4.4e-184 648.3 475 69.3
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 1.3e-183 646.7 464 68.8
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 1.3e-183 646.7 464 69.4
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 1.7e-183 646.4 461 70.7
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 1.7e-183 646.4 465 68.6
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 2.2e-183 646.0 464 68.5
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 2.2e-183 646.0 461 70.5
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 2.2e-183 646.0 464 69.4
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 2.8e-183 645.6 464 69.0
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 2.8e-183 645.6 467 69.2
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 2.8e-183 645.6 463 69.5
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 3.7e-183 645.2 459 69.9
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 3.7e-183 645.2 461 70.3
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 6.3e-183 644.4 467 69.6
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 8.2e-183 644.0 464 69.0
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 8.2e-183 644.0 461 69.6
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.4e-182 643.3 462 68.6
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 1.8e-182 642.9 463 68.9
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 2.4e-182 642.5 461 70.7
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 4.1e-182 641.7 461 68.5
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 7.0e-182 641.0 463 68.7
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 9.1e-182 640.6 461 69.6
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 9.1e-182 640.6 461 68.1
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 1.2e-181 640.2 465 68.2
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 1.5e-181 639.8 463 68.9
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 2.0e-181 639.4 459 70.4
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 3.5e-181 638.6 472 67.4
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 5.9e-181 637.9 464 67.9
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 1.0e-180 637.1 464 67.9
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 1.0e-180 637.1 455 70.5
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 1.7e-180 636.3 463 68.0
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 2.5e-179 632.5 460 69.3
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 4.2e-179 631.7 472 66.9
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 5.5e-179 631.3 471 67.9
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 9.4e-179 630.6 460 69.6
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 2.7e-178 629.0 460 69.6
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 6.1e-178 627.9 479 67.4
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 6.1e-178 627.9 468 66.9
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.0e-177 627.1 474 67.9
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 2.0e-173 612.8 441 70.7
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.8e-172 608.6 464 66.8
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 1.2e-168 597.0 439 69.9
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.0e-165 586.3 482 63.5
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 2.2e-164 582.8 450 66.2
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 6.5e-164 581.3 443 66.8
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 2.7e-162 575.9 454 63.4
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 2.6e-160 569.3 469 64.6
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 2.4e-158 562.8 439 63.3
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 3.1e-158 562.4 445 61.8
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 2.7e-157 559.3 440 62.7
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 2.2e-151 539.7 466 60.9
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 1.4e-145 520.4 471 59.2
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 9.2e-142 507.7 412 66.3
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 2.7e-141 506.1 366 67.8
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.8e-129 466.8 287 79.1
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 1.5e-128 463.8 281 79.7
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 4.9e-127 458.8 354 64.7
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 6.0e-125 451.8 354 64.1
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 1.2e-120 437.6 467 52.5
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 2.7e-109 399.8 363 56.2
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 2.3e-108 396.7 466 48.9
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 5.1e-108 395.6 267 70.8
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 2.2e-103 380.2 439 47.6
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 4.9e-103 379.0 284 65.5
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 8.7e-100 368.2 287 63.1
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 2.2e-95 353.6 195 86.2
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 1.2e-88 331.3 199 80.4
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 4.6e-85 319.3 234 68.8
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 4.6e-85 319.3 234 68.8
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 1.3e-82 311.2 379 45.6
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 1.1e-81 308.1 284 56.0
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 2.2e-74 283.9 448 40.4
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.6e-69 267.7 211 60.2
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 2.2e-66 257.3 412 39.3
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 4.4e-43 179.9 116 75.0
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 2.8e-37 160.6 160 50.6
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 2.0e-35 154.5 137 54.0
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 3.4e-35 153.7 95 81.1
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 5.7e-35 152.9 143 51.7
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 3.1e-28 130.6 160 42.5
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 2.0e-27 127.9 160 41.9
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 2.6e-27 127.5 92 64.1
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 1.6e-21 108.2 56 87.5
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 3.6e-21 107.1 135 43.0
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 1.1e-20 105.5 65 72.3
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 9.2e-17 92.4 72 68.1
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 9.2e-17 92.4 72 68.1
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 7.8e-16 89.4 99 45.5
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 7.8e-16 89.4 99 45.5
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 4.3e-14 83.6 44 84.1
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 1.2e-13 82.0 49 69.4
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 2.1e-13 81.3 64 67.2
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 1.5e-11 75.1 72 51.4
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 5.8e-11 73.2 52 67.3
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 9.9e-11 72.4 35 88.6
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 3.2e-09 67.4 53 54.7
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 1.0e-07 62.4 32 78.1
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 1.1e-06 58.9 55 47.3
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 2.5e-06 57.8 35 77.1
arahy.Tifrunner.gnm1.ann1.E22CU6 Arachis hypogaea HOM05D001714 ORTHO05D084687 3.3e-06 57.4 39 69.2


User provided reference genes

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