Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.2e-261 906.0 466 100.0
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.7e-167 593.2 434 70.3
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.2e-165 587.0 445 64.9
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 6.2e-165 584.7 437 67.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 4.0e-164 582.0 437 68.0
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 8.9e-164 580.9 519 60.9
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 2.2e-162 576.2 436 65.1
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 7.3e-150 534.6 460 62.0
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 8.1e-149 531.2 471 61.4
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 6.9e-148 528.1 477 58.7
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.2e-147 527.3 445 60.7
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.6e-147 526.2 437 62.5
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.2e-146 523.1 440 60.5
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 2.9e-146 522.7 431 62.9
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 4.9e-146 521.9 441 61.0
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 1.1e-145 520.8 433 60.5
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.4e-145 520.4 463 59.8
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.9e-145 520.0 440 61.8
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.9e-145 520.0 435 61.8
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.2e-145 518.8 429 61.8
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 4.2e-145 518.8 464 59.7
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 7.1e-145 518.1 444 59.5
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 9.3e-145 517.7 443 59.8
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.2e-144 517.3 438 60.5
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.2e-144 517.3 444 59.5
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.5e-144 515.8 438 61.2
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.6e-144 515.4 429 61.5
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 6.0e-144 515.0 460 60.0
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 6.0e-144 515.0 436 61.2
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 7.9e-144 514.6 439 59.5
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 7.9e-144 514.6 440 59.1
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.0e-143 514.2 429 61.3
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 1.0e-143 514.2 429 61.1
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.0e-143 514.2 441 60.1
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.3e-143 513.8 436 59.4
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 1.3e-143 513.8 440 59.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.3e-143 513.8 436 59.9
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.3e-143 513.1 445 59.1
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 5.1e-143 511.9 429 61.5
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 6.7e-143 511.5 434 61.8
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 1.1e-142 510.8 439 60.1
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.9e-142 510.0 438 61.2
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 2.5e-142 509.6 438 60.7
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.3e-142 509.2 429 61.1
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 5.6e-142 508.4 439 59.2
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 5.6e-142 508.4 475 57.5
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 7.4e-142 508.1 462 58.0
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 1.6e-141 506.9 434 60.1
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.8e-141 506.1 464 59.1
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.8e-141 506.1 438 60.0
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 4.8e-141 505.4 430 60.2
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 6.2e-141 505.0 432 58.6
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.4e-140 503.8 435 59.8
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.4e-140 503.8 432 60.0
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.8e-140 503.4 428 61.2
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 4.0e-140 502.3 442 59.3
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 5.3e-140 501.9 439 59.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.6e-139 499.6 431 59.2
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 4.5e-139 498.8 438 59.1
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 7.6e-139 498.0 456 58.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 2.9e-138 496.1 450 58.0
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 3.8e-138 495.7 440 59.1
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 3.8e-138 495.7 440 59.1
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 4.9e-138 495.4 431 59.6
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 6.5e-138 495.0 435 60.2
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 6.0e-136 488.4 442 56.8
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.3e-135 487.3 488 56.4
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 6.7e-135 485.0 457 56.9
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.5e-134 483.8 429 57.1
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 4.8e-133 478.8 413 61.0
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.8e-132 476.9 436 57.6
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 4.1e-132 475.7 432 56.7
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.2e-131 474.2 440 56.1
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.2e-131 474.2 427 57.8
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 2.0e-131 473.4 431 57.5
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 4.5e-131 472.2 436 56.4
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 4.5e-131 472.2 442 55.9
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.2e-130 469.9 425 56.7
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 3.8e-130 469.2 435 56.3
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.9e-129 466.8 435 56.1
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.5e-129 466.5 437 54.9
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.5e-129 466.5 440 55.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 3.2e-129 466.1 432 56.2
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 3.2e-129 466.1 423 56.3
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.3e-127 460.7 425 56.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 6.7e-127 458.4 425 56.0
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 3.8e-122 442.6 498 48.6
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 3.2e-121 439.5 395 57.2
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 7.9e-120 434.9 468 50.2
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 7.9e-120 434.9 371 60.1
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.0e-119 434.5 371 59.8
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.1e-118 431.0 384 56.2
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.3e-117 427.6 355 60.6
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 6.3e-117 425.2 342 61.1
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 5.0e-114 415.6 342 61.4
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 3.2e-113 412.9 444 48.9
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.6e-110 403.3 342 59.6
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 7.0e-108 395.2 376 52.9
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 6.1e-104 382.1 334 57.2
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 5.7e-102 375.6 285 64.2
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.3e-101 374.4 375 52.8
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.8e-101 373.2 384 52.1
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.7e-99 365.2 384 49.5
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 2.1e-96 357.1 305 60.0
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 5.7e-94 349.0 304 60.2
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.1e-89 334.7 315 52.4
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.2e-86 324.7 443 44.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 7.5e-86 322.0 379 44.6
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.8e-85 320.1 374 47.3
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 7.7e-83 312.0 242 62.4
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 5.7e-78 295.8 257 59.1
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 2.2e-77 293.9 241 62.7
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 3.0e-74 283.5 298 50.0
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 5.0e-74 282.7 292 52.4
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.2e-67 261.5 335 44.5
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 3.0e-66 256.9 349 45.6
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 2.8e-64 250.4 158 74.7
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 7.8e-59 232.3 258 48.4
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 1.1e-57 228.4 189 57.7
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 9.2e-52 208.8 163 62.6
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.8e-48 197.2 244 42.6
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 8.4e-45 185.7 142 64.8
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.5e-35 153.7 306 32.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.5e-33 147.5 151 64.2
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.9e-28 131.3 194 45.4
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 3.3e-25 120.6 126 50.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 7.4e-25 119.4 121 51.2
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.9e-17 94.7 57 78.9
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 5.5e-12 76.6 84 48.8
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 4.6e-11 73.6 61 59.0


User provided reference genes

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