Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.4e-111 406.4 218 100.0
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.1e-84 317.0 246 73.2
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 4.6e-78 295.0 230 72.2
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.9e-76 289.7 247 65.6
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.6e-75 286.6 246 65.0
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 4.0e-74 282.0 246 63.8
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 3.4e-73 278.9 233 66.1
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 3.8e-72 275.4 232 67.2
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 3.2e-71 272.3 246 62.6
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 4.2e-71 271.9 230 65.2
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 4.2e-71 271.9 247 63.6
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 9.3e-71 270.8 234 66.2
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 1.2e-70 270.4 244 63.9
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 1.2e-70 270.4 244 62.3
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.7e-70 269.2 227 66.1
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 2.7e-70 269.2 243 63.0
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.0e-69 265.8 238 62.2
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 8.7e-69 264.2 238 61.8
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 9.6e-68 260.8 239 61.5
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 3.6e-67 258.8 252 60.7
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 4.8e-67 258.5 241 61.0
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 1.4e-66 256.9 247 60.7
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 1.8e-66 256.5 240 60.8
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 4.0e-66 255.4 239 59.8
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.5e-65 253.4 244 58.2
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 2.0e-65 253.1 244 58.2
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.4e-65 252.3 248 58.9
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 5.8e-65 251.5 242 58.7
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 9.9e-65 250.8 244 57.4
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 1.3e-64 250.4 236 62.3
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 2.9e-64 249.2 240 58.3
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 2.9e-64 249.2 242 58.7
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 6.4e-64 248.1 244 57.0
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 8.4e-64 247.7 244 57.4
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 1.9e-63 246.5 255 56.5
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 1.9e-63 246.5 218 62.4
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 4.2e-63 245.4 233 61.4
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 5.4e-63 245.0 253 58.5
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 5.4e-63 245.0 236 61.0
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 1.2e-62 243.8 232 59.9
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 2.1e-62 243.0 228 58.3
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 2.7e-62 242.7 241 56.4
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 3.5e-62 242.3 237 60.3
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 7.9e-62 241.1 237 59.5
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 7.9e-62 241.1 245 55.5
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 1.0e-61 240.7 237 59.5
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.3e-61 239.6 242 57.0
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 3.0e-61 239.2 239 59.0
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 5.1e-61 238.4 235 59.1
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 6.7e-61 238.0 247 56.7
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 6.7e-61 238.0 232 58.2
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 6.7e-61 238.0 243 57.2
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 6.7e-61 238.0 234 59.4
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.1e-60 237.3 234 57.3
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 1.5e-60 236.9 247 56.7
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 1.5e-60 236.9 230 58.3
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.5e-60 236.9 233 57.9
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 2.5e-60 236.1 246 56.5
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.3e-60 235.3 247 56.3
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 9.6e-60 234.2 225 58.2
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 1.3e-59 233.8 232 59.1
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 4.8e-59 231.9 234 58.5
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 4.8e-59 231.9 243 54.7
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 1.4e-58 230.3 234 56.8
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.8e-58 229.9 240 55.8
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.4e-58 229.6 231 57.1
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.4e-58 229.6 230 57.0
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 5.3e-58 228.4 240 55.8
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 6.9e-58 228.0 231 60.2
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 9.0e-58 227.6 198 64.1
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 1.2e-57 227.3 230 57.0
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 1.2e-57 227.3 240 55.8
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 5.8e-57 224.9 229 56.8
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 7.6e-57 224.6 233 56.7
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 7.6e-57 224.6 242 56.2
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 9.9e-57 224.2 230 56.5
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 9.9e-57 224.2 243 54.3
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.7e-56 223.4 239 56.5
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 3.2e-55 219.2 240 52.9
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 4.6e-54 215.3 246 52.8
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 7.9e-54 214.5 246 53.3
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.3e-53 213.8 242 52.9
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.3e-53 213.8 242 52.9
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.8e-53 213.4 248 50.0
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.3e-53 213.0 254 49.2
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 2.3e-53 213.0 236 53.0
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 3.0e-53 212.6 241 51.5
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 5.1e-53 211.8 223 55.2
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.5e-52 210.3 251 48.6
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 9.6e-52 207.6 254 47.6
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 2.1e-51 206.5 249 49.8
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.1e-50 204.1 253 47.8
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 1.1e-50 204.1 242 49.2
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.4e-50 203.0 254 47.6
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 3.1e-50 202.6 233 50.2
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 1.5e-49 200.3 254 47.2
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.0e-48 197.6 249 47.4
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 1.0e-48 197.6 248 47.6
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 1.0e-48 197.6 248 47.6
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 1.7e-48 196.8 241 46.5
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 1.4e-47 193.7 254 46.5
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.5e-44 183.7 176 56.8
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.5e-44 183.7 162 65.4
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 4.3e-44 182.2 255 45.5
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.6e-43 180.3 244 43.0
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 2.0e-41 173.3 238 44.1
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 2.6e-41 172.9 190 55.8
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 3.4e-41 172.6 237 44.3
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 7.6e-41 171.4 244 41.8
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.3e-40 170.6 237 43.9
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.3e-40 170.6 237 43.9
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 2.9e-40 169.5 235 43.4
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 6.5e-40 168.3 128 71.9
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.8e-37 160.2 199 48.7
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.1e-30 136.7 193 47.2
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.5e-28 130.6 100 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 9.7e-28 127.9 148 50.7
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 4.1e-26 122.5 95 69.5
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 4.5e-25 119.0 228 36.4
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.9e-25 118.6 75 82.7
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 3.2e-23 112.8 104 61.5
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.5e-20 104.0 79 75.9
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 1.1e-18 97.8 147 42.2
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 1.2e-17 94.4 98 50.0
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 8.0e-14 81.6 99 48.5
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 1.8e-13 80.5 83 51.8
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 5.7e-12 75.5 64 59.4
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 3.7e-11 72.8 140 35.0
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.1e-07 61.2 75 53.3


User provided reference genes

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