Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.4e-80 302.8 140 100.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.7e-49 199.5 112 72.3
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.4e-48 195.7 115 71.3
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 2.3e-46 189.1 142 58.5
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 5.1e-46 188.0 143 55.9
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 6.6e-46 187.6 175 50.9
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.6e-44 181.8 131 56.5
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 4.7e-44 181.4 107 65.4
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 8.1e-44 180.6 113 65.5
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.1e-44 180.6 115 62.6
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.1e-44 180.6 142 54.9
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.8e-43 179.5 107 65.4
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 3.1e-43 178.7 140 55.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 4.0e-43 178.3 140 53.6
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.2e-43 177.9 145 55.2
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 5.2e-43 177.9 145 55.2
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 3.4e-42 175.3 137 55.5
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 5.8e-42 174.5 139 56.1
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.6e-42 174.1 140 55.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 9.9e-42 173.7 146 52.7
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.3e-41 173.3 140 54.3
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 1.3e-41 173.3 105 63.8
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.7e-41 172.9 140 55.7
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.7e-41 172.9 138 53.6
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.7e-41 172.9 145 53.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 2.2e-41 172.6 140 53.6
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 2.2e-41 172.6 102 66.7
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.2e-41 172.6 138 53.6
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.2e-41 172.6 138 53.6
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 3.8e-41 171.8 108 62.0
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 3.8e-41 171.8 141 54.6
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 6.4e-41 171.0 107 61.7
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 6.4e-41 171.0 107 61.7
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 6.4e-41 171.0 107 61.7
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 6.4e-41 171.0 107 61.7
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 6.4e-41 171.0 107 61.7
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 6.4e-41 171.0 140 55.0
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.1e-40 170.2 135 54.1
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.1e-40 170.2 141 53.9
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.4e-40 169.9 105 61.9
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.4e-40 169.9 105 61.9
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.4e-40 169.9 105 61.9
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.4e-40 169.1 143 53.1
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 3.2e-40 168.7 113 61.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-40 168.7 141 51.1
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 3.2e-40 168.7 113 59.3
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 3.2e-40 168.7 113 61.1
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 3.2e-40 168.7 113 61.1
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 4.2e-40 168.3 137 55.5
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.2e-40 168.3 141 53.2
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 5.4e-40 167.9 140 52.9
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 5.4e-40 167.9 138 55.8
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 5.4e-40 167.9 107 63.6
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.1e-40 167.5 141 54.6
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 7.1e-40 167.5 114 58.8
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 7.1e-40 167.5 124 54.0
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 1.2e-39 166.8 107 59.8
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.2e-39 166.8 140 52.1
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.2e-39 166.8 138 52.2
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.1e-39 166.0 103 62.1
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.1e-39 166.0 141 53.2
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 2.1e-39 166.0 107 57.9
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.1e-39 166.0 137 53.3
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.7e-39 165.6 137 54.0
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 4.6e-39 164.9 107 58.9
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 6.0e-39 164.5 102 60.8
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 6.0e-39 164.5 140 50.7
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.0e-38 163.7 107 59.8
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.0e-38 163.7 140 53.6
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-38 163.3 95 66.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.3e-38 163.3 119 57.1
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.3e-38 162.5 140 52.1
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.3e-38 162.5 112 58.0
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.0e-38 162.2 104 57.7
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 3.0e-38 162.2 104 57.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 3.9e-38 161.8 105 57.1
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 5.1e-38 161.4 107 59.8
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 6.6e-38 161.0 136 52.2
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.1e-37 160.2 109 59.6
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.5e-37 159.8 140 50.7
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.5e-37 159.1 117 53.8
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.5e-37 159.1 146 48.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.3e-37 158.3 119 57.1
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.3e-36 156.8 178 41.6
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.6e-36 156.4 157 47.8
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.6e-36 156.4 115 53.0
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.8e-35 152.9 91 64.8
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 2.4e-35 152.5 137 51.8
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.4e-35 152.5 103 57.3
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 5.3e-35 151.4 159 45.3
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 9.0e-35 150.6 123 56.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 9.0e-35 150.6 145 49.7
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.4e-34 148.7 103 54.4
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.8e-34 147.9 124 51.6
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 2.9e-33 145.6 142 49.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 6.4e-33 144.4 154 44.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 4.2e-32 141.7 140 47.9
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 5.4e-32 141.4 78 70.5
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.2e-31 140.2 114 52.6
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.3e-30 136.0 121 52.9
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.1e-29 133.7 78 65.4
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.5e-29 132.5 126 50.8
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 9.6e-29 130.6 147 43.5
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.4e-27 126.7 88 59.1
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.8e-27 126.3 87 59.8
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 5.8e-26 121.3 90 58.9
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.6e-23 113.2 106 45.3
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 3.5e-23 112.1 149 40.3
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.9e-21 106.3 98 52.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 7.4e-21 104.4 97 52.6
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.6e-20 103.2 98 51.0
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 5.3e-19 98.2 94 52.1
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 5.3e-19 98.2 94 52.1
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 7.6e-18 94.4 103 48.5
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 3.8e-17 92.0 101 48.5
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 8.4e-17 90.9 75 54.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 4.6e-15 85.1 99 45.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.8e-14 83.2 54 59.3
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.8e-11 73.2 100 42.0
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 1.2e-07 60.5 38 60.5


User provided reference genes

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