Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6471 Utricularia gibba HOM05D001464 ORTHO05D002836 1.1e-89 333.2 163 100.0
unitig_8.g3171 Utricularia gibba HOM05D001464 ORTHO05D002836 2.9e-16 89.4 126 45.2
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 3.7e-16 89.0 209 36.4
SalBow2G1020 Salvia bowleyana HOM05D001464 ORTHO05D002836 2.4e-15 86.3 123 46.3
QL03p061967 Quercus lobata HOM05D001464 ORTHO05D002836 3.2e-15 85.9 169 39.6
SalBow2G1597 Salvia bowleyana HOM05D001464 ORTHO05D002836 1.2e-14 84.0 122 45.9
Carub.0002s0519 Capsella rubella HOM05D001464 ORTHO05D002836 2.0e-14 83.2 130 40.8
Aa31LG2G10180 Aethionema arabicum HOM05D001464 ORTHO05D002836 4.6e-14 82.0 132 41.7
Cfa009118 Carpinus fangiana HOM05D001464 ORTHO05D002836 4.6e-14 82.0 130 41.5
Migut.L01435 Erythranthe guttata HOM05D001464 ORTHO05D002836 6.0e-14 81.6 126 44.4
Thhalv10023517m.g Eutrema salsugineum HOM05D001464 ORTHO05D002836 7.8e-14 81.3 132 41.7
BcaC04g22216 Brassica carinata HOM05D001464 ORTHO05D002836 1.0e-13 80.9 130 40.0
BNapus_Darmor_BZH_scaffold_155p00050 Brassica napus HOM05D001464 ORTHO05D002836 1.0e-13 80.9 130 40.0
BolC9t55110H Brassica oleracea HOM05D001464 ORTHO05D002836 1.0e-13 80.9 130 40.0
CARHR052890 Cardamine hirsuta HOM05D001464 ORTHO05D002836 1.3e-13 80.5 133 41.4
COL.COLO4_19528 Corchorus olitorius HOM05D001464 ORTHO05D002836 1.3e-13 80.5 163 38.7
Nitab4.5_0002198g0030 Nicotiana tabacum HOM05D001464 ORTHO05D002836 1.7e-13 80.1 124 41.1
PGR119G1860 Punica granatum HOM05D001464 ORTHO05D002836 1.7e-13 80.1 129 40.3
TWI75G0695 Tripterygium wilfordii HOM05D001464 ORTHO05D002836 1.7e-13 80.1 134 38.8
Aqoxy3G03050 Aquilegia oxysepala HOM05D001464 ORTHO05D002836 2.3e-13 79.7 132 40.2
A09p17700 Brassica napus HOM05D001464 ORTHO05D002836 2.3e-13 79.7 130 39.2
BraA09t37398Z Brassica rapa HOM05D001464 ORTHO05D002836 2.3e-13 79.7 130 39.2
Atru.chr11.1992 Acer truncatum HOM05D001464 ORTHO05D002836 3.0e-13 79.3 129 40.3
CiPaw.05G148000 Carya illinoinensis HOM05D001464 ORTHO05D002836 3.0e-13 79.3 129 41.9
Ciclev10031899m.g Citrus clementina HOM05D001464 ORTHO05D002836 3.0e-13 79.3 129 40.3
Duzib251G0903 Durio zibethinus HOM05D001464 ORTHO05D002836 3.0e-13 79.3 128 40.6
Nn3g16940 Nelumbo nucifera HOM05D001464 ORTHO05D002836 3.0e-13 79.3 128 42.2
Lj2g0010221 Lotus japonicus HOM05D001464 ORTHO05D002836 5.0e-13 78.6 129 40.3
Nitab4.5_0000052g0280 Nicotiana tabacum HOM05D001464 ORTHO05D002836 5.0e-13 78.6 127 40.2
Phvul.002G072900 Phaseolus vulgaris HOM05D001464 ORTHO05D002836 5.0e-13 78.6 129 40.3
THA.LOC104816749 Tarenaya hassleriana HOM05D001464 ORTHO05D002836 5.0e-13 78.6 134 39.6
VMungo1215G0073 Vigna mungo HOM05D001464 ORTHO05D002836 5.0e-13 78.6 129 40.3
CiPaw.06G073100 Carya illinoinensis HOM05D001464 ORTHO05D002836 6.6e-13 78.2 129 39.5
HanXRQChr17g0570241 Helianthus annuus HOM05D001464 ORTHO05D002836 6.6e-13 78.2 126 39.7
BcaB07g31200 Brassica carinata HOM05D001464 ORTHO05D002836 8.6e-13 77.8 135 39.3
Gohir.A03G141300 Gossypium hirsutum HOM05D001464 ORTHO05D002836 8.6e-13 77.8 128 40.6
Gohir.D02G164200 Gossypium hirsutum HOM05D001464 ORTHO05D002836 8.6e-13 77.8 128 40.6
Ca_04613_v3 Cicer arietinum L. HOM05D001464 ORTHO05D002836 1.1e-12 77.4 169 36.7
Glyma.08G289500 Glycine max HOM05D001464 ORTHO05D002836 1.1e-12 77.4 167 37.1
Medtr5g034840 Medicago truncatula HOM05D001464 ORTHO05D002836 1.1e-12 77.4 131 39.7
Nn4g22853 Nelumbo nucifera HOM05D001464 ORTHO05D002836 1.1e-12 77.4 208 33.2
AL2G16630 Arabidopsis lyrata HOM05D001464 ORTHO05D002836 1.5e-12 77.0 132 40.2
BcaB04g20248 Brassica carinata HOM05D001464 ORTHO05D002836 1.5e-12 77.0 132 39.4
Gorai.005G184200 Gossypium raimondii HOM05D001464 ORTHO05D002836 1.5e-12 77.0 135 39.3
Thecc.02G246600 Theobroma cacao HOM05D001464 ORTHO05D002836 1.5e-12 77.0 128 40.6
Aqoxy3G00949 Aquilegia oxysepala HOM05D001464 ORTHO05D002836 1.9e-12 76.6 130 39.2
BcaC09g49437 Brassica carinata HOM05D001464 ORTHO05D002836 1.9e-12 76.6 132 39.4
C01p36760 Brassica napus HOM05D001464 ORTHO05D002836 1.9e-12 76.6 132 39.4
BolC1t03635H Brassica oleracea HOM05D001464 ORTHO05D002836 1.9e-12 76.6 132 39.4
Glyma.01G032600 Glycine max HOM05D001464 ORTHO05D002836 1.9e-12 76.6 129 39.5
MD16G1089000 Malus domestica HOM05D001464 ORTHO05D002836 1.9e-12 76.6 136 39.0
Actinidia15025 Actinidia chinensis HOM05D001464 ORTHO05D002836 2.5e-12 76.3 128 40.6
MSTRG.607 Avicennia marina HOM05D001464 ORTHO05D002836 2.5e-12 76.3 130 41.5
CAN.G205.15 Capsicum annuum HOM05D001464 ORTHO05D002836 2.5e-12 76.3 128 39.8
Dinv24887 Davidia involucrata HOM05D001464 ORTHO05D002836 2.5e-12 76.3 129 38.8
HanXRQChr08g0208861 Helianthus annuus HOM05D001464 ORTHO05D002836 2.5e-12 76.3 155 38.7
GSVIVG01020205001 Vitis vinifera HOM05D001464 ORTHO05D002836 2.5e-12 76.3 128 40.6
MSTRG.7879 Avicennia marina HOM05D001464 ORTHO05D002836 3.3e-12 75.9 131 41.2
CSS0031711 Camellia sinensis var. sinensis HOM05D001464 ORTHO05D002836 3.3e-12 75.9 134 38.8
Eucgr.B03947 Eucalyptus grandis HOM05D001464 ORTHO05D002836 3.3e-12 75.9 129 39.5
HanXRQChr12g0383401 Helianthus annuus HOM05D001464 ORTHO05D002836 3.3e-12 75.9 114 42.1
Lalb_Chr16g0382411 Lupinus albus HOM05D001464 ORTHO05D002836 3.3e-12 75.9 132 40.9
TPR.G4430 Trifolium pratense HOM05D001464 ORTHO05D002836 3.3e-12 75.9 135 40.0
Cc11_g14410 Coffea canephora HOM05D001464 ORTHO05D002836 4.3e-12 75.5 128 40.6
Dinv31014 Davidia involucrata HOM05D001464 ORTHO05D002836 4.3e-12 75.5 128 39.1
Dinv31088 Davidia involucrata HOM05D001464 ORTHO05D002836 4.3e-12 75.5 128 39.1
FAN12G1037 Fragaria x ananassa HOM05D001464 ORTHO05D002836 4.3e-12 75.5 143 37.8
Potri.010G096400 Populus trichocarpa HOM05D001464 ORTHO05D002836 4.3e-12 75.5 128 40.6
Sabra10G0068900 Salix brachista HOM05D001464 ORTHO05D002836 4.3e-12 75.5 167 37.1
Cpa.g.sc258.11 Carica papaya HOM05D001464 ORTHO05D002836 5.6e-12 75.1 131 39.7
Glyma.02G032700 Glycine max HOM05D001464 ORTHO05D002836 5.6e-12 75.1 129 38.8
Manes.05G089000 Manihot esculenta HOM05D001464 ORTHO05D002836 5.6e-12 75.1 128 39.8
Sed0005883 Sechium edule HOM05D001464 ORTHO05D002836 5.6e-12 75.1 138 37.7
CSS0009867 Camellia sinensis var. sinensis HOM05D001464 ORTHO05D002836 7.3e-12 74.7 128 39.1
Duzib248G0333 Durio zibethinus HOM05D001464 ORTHO05D002836 7.3e-12 74.7 157 36.9
ECA234G1389 Erigeron canadensis HOM05D001464 ORTHO05D002836 7.3e-12 74.7 124 37.9
PSO063G2642 Papaver somniferum HOM05D001464 ORTHO05D002836 7.3e-12 74.7 131 38.2
PSO832G1990 Papaver somniferum HOM05D001464 ORTHO05D002836 7.3e-12 74.7 131 38.2
ECA233G5992 Erigeron canadensis HOM05D001464 ORTHO05D002836 9.5e-12 74.3 74 59.5
unitig_26.g10337 Utricularia gibba HOM05D001464 ORTHO05D002836 9.5e-12 74.3 125 37.6
Sp2g04540 Schrenkiella parvula HOM05D001464 ORTHO05D002836 1.2e-11 73.9 134 38.8
AT1G60060 Arabidopsis thaliana HOM05D001464 ORTHO05D002836 1.6e-11 73.6 132 37.9
CsaV3_5G031750 Cucumis sativus L. HOM05D001464 ORTHO05D002836 1.6e-11 73.6 131 38.2
FAN22G0058 Fragaria x ananassa HOM05D001464 ORTHO05D002836 1.6e-11 73.6 138 38.4
arahy.Tifrunner.gnm1.ann1.XFL0DY Arachis hypogaea HOM05D001464 ORTHO05D002836 2.1e-11 73.2 144 37.5
FvH4_4g34860 Fragaria vesca HOM05D001464 ORTHO05D002836 2.1e-11 73.2 142 37.3
FAN07G2436 Fragaria x ananassa HOM05D001464 ORTHO05D002836 2.1e-11 73.2 142 37.3
FAN17G2701 Fragaria x ananassa HOM05D001464 ORTHO05D002836 2.1e-11 73.2 142 37.3
MELO3C012014.2 Cucumis melo HOM05D001464 ORTHO05D002836 2.8e-11 72.8 127 37.8
Sed0018762 Sechium edule HOM05D001464 ORTHO05D002836 2.8e-11 72.8 133 37.6
HPP92_018293 Vanilla planifolia HOM05D001464 ORTHO05D002836 2.8e-11 72.8 110 40.9
Hma1.2p1_1017F.1_g248320 Hydrangea macrophylla HOM05D001464 ORTHO05D002836 3.6e-11 72.4 132 37.9
Sopen05g001820 Solanum pennellii HOM05D001464 ORTHO05D002836 3.6e-11 72.4 132 37.9
Peaxi162Scf00421g00027 Petunia axillaris HOM05D001464 ORTHO05D002836 4.7e-11 72.0 129 38.8
ClCG05G025150 Citrullus lanatus HOM05D001464 ORTHO05D002836 6.2e-11 71.6 130 39.2
Lalb_Chr05g0217071 Lupinus albus HOM05D001464 ORTHO05D002836 6.2e-11 71.6 36 88.9
Manes.01G198000 Manihot esculenta HOM05D001464 ORTHO05D002836 6.2e-11 71.6 36 88.9
Prupe.1G256900 Prunus persica HOM05D001464 ORTHO05D002836 6.2e-11 71.6 134 37.3
arahy.Tifrunner.gnm1.ann1.JRGB4J Arachis hypogaea HOM05D001464 ORTHO05D002836 8.0e-11 71.2 142 37.3
MD13G1088900 Malus domestica HOM05D001464 ORTHO05D002836 8.0e-11 71.2 35 91.4
SGA_v2.0_scaffold165G38267 Striga asiatica HOM05D001464 ORTHO05D002836 8.0e-11 71.2 130 38.5
Haze_12154 Corylus avellana HOM05D001464 ORTHO05D002836 1.1e-10 70.9 127 38.6
Solyc05g005810.4 Solanum lycopersicum HOM05D001464 ORTHO05D002836 1.1e-10 70.9 133 38.3
Lsat_1_v5_gn_8_157561 Lactuca sativa HOM05D001464 ORTHO05D002836 1.4e-10 70.5 36 86.1
PGSC0003DMG400004129 Solanum tuberosum HOM05D001464 ORTHO05D002836 1.4e-10 70.5 36 88.9
Lsat_1_v5_gn_4_7141 Lactuca sativa HOM05D001464 ORTHO05D002836 2.3e-10 69.7 36 86.1
TAR371G1038 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.3e-10 69.7 190 33.2
Actinidia32591 Actinidia chinensis HOM05D001464 ORTHO05D002836 3.1e-10 69.3 36 86.1
RcHm_v2.0_Chr4g0444251 Rosa chinensis HOM05D001464 ORTHO05D002836 4.0e-10 68.9 140 36.4
vmacro01192 Vaccinium macrocarpon HOM05D001464 ORTHO05D002836 4.0e-10 68.9 78 51.3
vmacro22611 Vaccinium macrocarpon HOM05D001464 ORTHO05D002836 4.0e-10 68.9 78 51.3
CANSAT01G3002 Cannabis sativa HOM05D001464 ORTHO05D002836 5.2e-10 68.6 36 86.1
DCAR_024136 Daucus carota HOM05D001464 ORTHO05D002836 5.2e-10 68.6 126 38.1
Sc04g0008990 Simmondsia chinensis HOM05D001464 ORTHO05D002836 5.2e-10 68.6 133 36.8
Hund25331 Selenicereus undatus HOM05D001464 ORTHO05D002836 6.8e-10 68.2 139 36.7
THA.LOC104819471 Tarenaya hassleriana HOM05D001464 ORTHO05D002836 6.8e-10 68.2 135 37.0
Actinidia27774 Actinidia chinensis HOM05D001464 ORTHO05D002836 8.9e-10 67.8 124 37.1
ATR1149G003 Amborella trichopoda HOM05D001464 ORTHO05D002836 1.2e-09 67.4 74 55.4
GSVIVG01007796001 Vitis vinifera HOM05D001464 ORTHO05D002836 1.5e-09 67.0 162 32.1
A01p29040 Brassica napus HOM05D001464 ORTHO05D002836 2.0e-09 66.6 36 80.6
BraA01t02992Z Brassica rapa HOM05D001464 ORTHO05D002836 2.0e-09 66.6 36 80.6
SalBow8G1514 Salvia bowleyana HOM05D001464 ORTHO05D002836 2.0e-09 66.6 35 82.9
CDE04G2883 Ceratophyllum demersum HOM05D001464 ORTHO05D002836 2.6e-09 66.2 122 37.7
PSO017G3926 Papaver somniferum HOM05D001464 ORTHO05D002836 2.6e-09 66.2 36 77.8
PSO478G1608 Papaver somniferum HOM05D001464 ORTHO05D002836 2.6e-09 66.2 36 77.8
Os02g0742700 Oryza sativa ssp. japonica HOM05D001464 ORTHO05D002836 3.4e-09 65.9 127 37.8
Ah.02g129740 Amaranthus hybridus HOM05D001464 ORTHO05D002836 5.8e-09 65.1 63 58.7
Atru.chr9.2429 Acer truncatum HOM05D001464 ORTHO05D002836 7.5e-09 64.7 113 39.8
Os06g0233800 Oryza sativa ssp. japonica HOM05D001464 ORTHO05D002836 7.5e-09 64.7 131 36.6
SEGI_17554 Sequoiadendron giganteum HOM05D001464 ORTHO05D002836 7.5e-09 64.7 35 77.1
SEGI_30140 Sequoiadendron giganteum HOM05D001464 ORTHO05D002836 7.5e-09 64.7 35 77.1
AUR62005336 Chenopodium quinoa HOM05D001464 ORTHO05D002836 9.8e-09 64.3 122 40.2
Zm00001eb254280 Zea mays HOM05D001464 ORTHO05D002836 9.8e-09 64.3 35 82.9
CDE07G0583 Ceratophyllum demersum HOM05D001464 ORTHO05D002836 2.9e-08 62.8 36 75.0
HPP92_016978 Vanilla planifolia HOM05D001464 ORTHO05D002836 4.9e-08 62.0 157 34.4
Sed0012647 Sechium edule HOM05D001464 ORTHO05D002836 6.4e-08 61.6 110 39.1
SEGI_36417 Sequoiadendron giganteum HOM05D001464 ORTHO05D002836 6.4e-08 61.6 95 41.1
SMO174G0215 Selaginella moellendorffii HOM05D001464 ORTHO05D002836 1.4e-07 60.5 65 47.7
SEGI_21541 Sequoiadendron giganteum HOM05D001464 ORTHO05D002836 1.4e-07 60.5 34 79.4
SEGI_22891 Sequoiadendron giganteum HOM05D001464 ORTHO05D002836 3.2e-07 59.3 99 35.4
Dinv39273 Davidia involucrata HOM05D001464 ORTHO05D002836 5.4e-07 58.5 117 34.2
Pp3c12_11470 Physcomitrium patens HOM05D001464 ORTHO05D002836 5.4e-07 58.5 81 39.5
Pp3c13_20820 Physcomitrium patens HOM05D001464 ORTHO05D002836 7.1e-07 58.2 35 68.6
Pp3c3_12640 Physcomitrium patens HOM05D001464 ORTHO05D002836 7.1e-07 58.2 134 32.1
Pp3c4_23320 Physcomitrium patens HOM05D001464 ORTHO05D002836 7.1e-07 58.2 35 68.6
ATR0580G446 Amborella trichopoda HOM05D001464 ORTHO05D002836 9.2e-07 57.8 34 79.4
MD15G1077500 Malus domestica HOM05D001464 ORTHO05D002836 9.2e-07 57.8 53 54.7
Migut.N02730 Erythranthe guttata HOM05D001464 ORTHO05D002836 1.2e-06 57.4 108 37.0
Mapoly0123s0025 Marchantia polymorpha HOM05D001464 ORTHO05D002836 1.2e-06 57.4 129 30.2
Peaxi162Scf01087g00126 Petunia axillaris HOM05D001464 ORTHO05D002836 2.1e-06 56.6 102 35.3
TWI56G0457 Tripterygium wilfordii HOM05D001464 ORTHO05D002836 2.7e-06 56.2 34 64.7
unitig_26.g9337 Utricularia gibba HOM05D001464 ORTHO05D002836 2.7e-06 56.2 118 33.1
arahy.Tifrunner.gnm1.ann1.DS6UFT Arachis hypogaea HOM05D001464 ORTHO05D002836 4.6e-06 55.5 102 41.2
Cc10_g04830 Coffea canephora HOM05D001464 ORTHO05D002836 4.6e-06 55.5 33 75.8
MD08G1093800 Malus domestica HOM05D001464 ORTHO05D002836 4.6e-06 55.5 34 73.5
MELO3C016782.2 Cucumis melo HOM05D001464 ORTHO05D002836 7.8e-06 54.7 56 51.8
Manes.05G177000 Manihot esculenta HOM05D001464 ORTHO05D002836 7.8e-06 54.7 34 70.6
Sed0016196 Sechium edule HOM05D001464 ORTHO05D002836 7.8e-06 54.7 33 75.8


User provided reference genes

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