Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6212 Utricularia gibba HOM05D001353 ORTHO05D005187 1.2e-67 259.6 124 100.0
VMungo1080G1628 Vigna mungo HOM05D001353 ORTHO05D005187 1.1e-47 193.4 121 76.9
Phvul.005G170400 Phaseolus vulgaris HOM05D001353 ORTHO05D005187 3.1e-47 191.8 121 76.0
MSTRG.11044 Avicennia marina HOM05D001353 ORTHO05D005187 4.1e-47 191.4 121 76.0
Glyma.15G018200 Glycine max HOM05D001353 ORTHO05D005187 9.0e-47 190.3 121 75.2
MELO3C024262.2 Cucumis melo HOM05D001353 ORTHO05D005187 1.2e-46 189.9 121 74.4
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 4.5e-46 188.0 121 76.0
CsaV3_7G033510 Cucumis sativus L. HOM05D001353 ORTHO05D005187 4.5e-46 188.0 121 74.4
Lalb_Chr24g0396041 Lupinus albus HOM05D001353 ORTHO05D005187 5.9e-46 187.6 121 72.7
QL05p021219 Quercus lobata HOM05D001353 ORTHO05D005187 1.0e-45 186.8 121 75.2
CSS0044224 Camellia sinensis var. sinensis HOM05D001353 ORTHO05D005187 2.2e-45 185.7 121 74.4
Ca_01153_v3 Cicer arietinum L. HOM05D001353 ORTHO05D005187 2.9e-45 185.3 121 74.4
Sed0007714 Sechium edule HOM05D001353 ORTHO05D005187 3.8e-45 184.9 121 71.9
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 6.5e-45 184.1 121 74.4
CiPaw.01G234100 Carya illinoinensis HOM05D001353 ORTHO05D005187 6.5e-45 184.1 121 74.4
THA.LOC104817973 Tarenaya hassleriana HOM05D001353 ORTHO05D005187 6.5e-45 184.1 121 74.4
arahy.Tifrunner.gnm1.ann1.8T8ZNV Arachis hypogaea HOM05D001353 ORTHO05D005187 8.5e-45 183.7 121 75.2
Potri.001G186600 Populus trichocarpa HOM05D001353 ORTHO05D005187 2.5e-44 182.2 121 72.7
Migut.I00929 Erythranthe guttata HOM05D001353 ORTHO05D005187 3.2e-44 181.8 121 71.1
MD17G1188900 Malus domestica HOM05D001353 ORTHO05D005187 4.2e-44 181.4 121 71.9
arahy.Tifrunner.gnm1.ann1.K0TTLC Arachis hypogaea HOM05D001353 ORTHO05D005187 9.4e-44 180.3 121 73.6
Eucgr.F03052 Eucalyptus grandis HOM05D001353 ORTHO05D005187 9.4e-44 180.3 121 72.7
QL05p021238 Quercus lobata HOM05D001353 ORTHO05D005187 1.2e-43 179.9 121 72.7
TPR.G37234 Trifolium pratense HOM05D001353 ORTHO05D005187 1.2e-43 179.9 121 71.1
TAR383G0250 Trochodendron aralioides HOM05D001353 ORTHO05D005187 1.2e-43 179.9 121 72.7
Actinidia32713 Actinidia chinensis HOM05D001353 ORTHO05D005187 1.6e-43 179.5 121 71.1
Cpa.g.sc109.36 Carica papaya HOM05D001353 ORTHO05D005187 2.1e-43 179.1 121 71.9
Lj3g0013233 Lotus japonicus HOM05D001353 ORTHO05D005187 2.7e-43 178.7 121 73.6
Duzib160G0428 Durio zibethinus HOM05D001353 ORTHO05D005187 3.6e-43 178.3 121 71.1
Sabra01G0153700 Salix brachista HOM05D001353 ORTHO05D005187 4.6e-43 177.9 121 70.2
SGA_v2.0_scaffold5G02539 Striga asiatica HOM05D001353 ORTHO05D005187 4.6e-43 177.9 121 71.1
Cc04_g02860 Coffea canephora HOM05D001353 ORTHO05D005187 6.1e-43 177.6 121 73.6
HPP92_005271 Vanilla planifolia HOM05D001353 ORTHO05D005187 6.1e-43 177.6 124 68.5
CANSAT56G0514 Cannabis sativa HOM05D001353 ORTHO05D005187 7.9e-43 177.2 121 70.2
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 7.9e-43 177.2 121 70.2
Thecc.06G095300 Theobroma cacao HOM05D001353 ORTHO05D005187 1.0e-42 176.8 121 71.1
FvH4_6g31960 Fragaria vesca HOM05D001353 ORTHO05D005187 2.3e-42 175.6 121 70.2
Manes.11G036600 Manihot esculenta HOM05D001353 ORTHO05D005187 2.3e-42 175.6 121 70.2
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 2.3e-42 175.6 121 71.9
PSO782G2586 Papaver somniferum HOM05D001353 ORTHO05D005187 5.1e-42 174.5 121 69.4
PGR102G2383 Punica granatum HOM05D001353 ORTHO05D005187 5.1e-42 174.5 121 70.2
SalBow2G1883 Salvia bowleyana HOM05D001353 ORTHO05D005187 8.8e-42 173.7 121 70.2
ATR0315G016 Amborella trichopoda HOM05D001353 ORTHO05D005187 1.1e-41 173.3 121 71.1
Medtr2g101350 Medicago truncatula HOM05D001353 ORTHO05D005187 1.5e-41 172.9 121 71.1
PSO566G0332 Papaver somniferum HOM05D001353 ORTHO05D005187 5.7e-41 171.0 121 66.9
RcHm_v2.0_Chr2g0139461 Rosa chinensis HOM05D001353 ORTHO05D005187 5.7e-41 171.0 121 66.9
BcaC01g03834 Brassica carinata HOM05D001353 ORTHO05D005187 9.7e-41 170.2 121 66.9
BcaC01g03832 Brassica carinata HOM05D001353 ORTHO05D005187 1.7e-40 169.5 121 67.8
C03p48170 Brassica napus HOM05D001353 ORTHO05D005187 1.7e-40 169.5 124 66.1
CDE05G3629 Ceratophyllum demersum HOM05D001353 ORTHO05D005187 1.7e-40 169.5 121 69.4
Thhalv10020736m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 1.7e-40 169.5 121 67.8
vmacro16977 Vaccinium macrocarpon HOM05D001353 ORTHO05D005187 2.2e-40 169.1 121 66.1
ClCG09G001840 Citrullus lanatus HOM05D001353 ORTHO05D005187 3.7e-40 168.3 121 67.8
A03p39730 Brassica napus HOM05D001353 ORTHO05D005187 6.3e-40 167.5 121 66.1
Carub.0003s1598 Capsella rubella HOM05D001353 ORTHO05D005187 6.3e-40 167.5 121 65.3
CARHR091420 Cardamine hirsuta HOM05D001353 ORTHO05D005187 8.2e-40 167.2 121 66.1
Solyc03g120480.3 Solanum lycopersicum HOM05D001353 ORTHO05D005187 8.2e-40 167.2 121 66.9
Sopen03g039360 Solanum pennellii HOM05D001353 ORTHO05D005187 8.2e-40 167.2 121 66.1
Hma1.2p1_0659F.1_g197330 Hydrangea macrophylla HOM05D001353 ORTHO05D005187 1.8e-39 166.0 121 68.6
Aqoxy7G01510 Aquilegia oxysepala HOM05D001353 ORTHO05D005187 2.4e-39 165.6 120 67.5
CAN.G438.39 Capsicum annuum HOM05D001353 ORTHO05D005187 2.4e-39 165.6 121 66.9
Rhsim12G0201500 Rhododendron simsii HOM05D001353 ORTHO05D000070 2.4e-39 165.6 123 64.2
AL3G28930 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 3.1e-39 165.2 121 64.5
BraA03t13123Z Brassica rapa HOM05D001353 ORTHO05D005187 3.1e-39 165.2 124 64.5
COL.COLO4_30466 Corchorus olitorius HOM05D001353 ORTHO05D005187 4.1e-39 164.9 137 60.6
Ciclev10025383m.g Citrus clementina HOM05D001353 ORTHO05D005187 6.9e-39 164.1 121 66.1
HanXRQChr04g0096261 Helianthus annuus HOM05D001353 ORTHO05D005187 6.9e-39 164.1 120 66.7
ECA247G1811 Erigeron canadensis HOM05D001353 ORTHO05D005187 1.2e-38 163.3 120 64.2
PGSC0003DMG401002551 Solanum tuberosum HOM05D001353 ORTHO05D005187 1.2e-38 163.3 129 62.8
Gorai.006G097100 Gossypium raimondii HOM05D001353 ORTHO05D005187 1.5e-38 162.9 121 64.5
Gohir.D03G060300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.0e-38 162.5 122 67.2
Atru.chr1.3463 Acer truncatum HOM05D001353 ORTHO05D005187 2.6e-38 162.2 122 66.4
Aa31LG8G3360 Aethionema arabicum HOM05D001353 ORTHO05D005187 2.6e-38 162.2 123 65.0
Nitab4.5_0006985g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 2.6e-38 162.2 124 65.3
Os01g0231900 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 2.6e-38 162.2 120 65.0
Sp3g14600 Schrenkiella parvula HOM05D001353 ORTHO05D005187 2.6e-38 162.2 121 64.5
Lsat_1_v5_gn_1_34781 Lactuca sativa HOM05D001353 ORTHO05D005187 4.5e-38 161.4 119 65.5
DCAR_007575 Daucus carota HOM05D001353 ORTHO05D005187 7.7e-38 160.6 121 66.9
Gohir.D09G081500 Gossypium hirsutum HOM05D001353 ORTHO05D005187 7.7e-38 160.6 121 62.8
Gohir.A09G081400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.0e-37 160.2 121 63.6
Nn2g11646 Nelumbo nucifera HOM05D001353 ORTHO05D005187 1.7e-37 159.5 122 65.6
Gohir.A02G119300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.2e-37 159.1 121 65.3
Hund00659 Selenicereus undatus HOM05D001353 ORTHO05D005187 2.2e-37 159.1 121 62.0
Gorai.003G064100 Gossypium raimondii HOM05D001353 ORTHO05D005187 2.9e-37 158.7 122 65.6
AUR62031870 Chenopodium quinoa HOM05D001353 ORTHO05D005187 8.5e-37 157.1 124 61.3
ATR0315G123 Amborella trichopoda HOM05D001353 ORTHO05D005187 1.1e-36 156.8 121 63.6
MBI01_g06185_MAGBIO Magnolia biondii HOM05D001353 ORTHO05D002359 3.2e-36 155.2 104 73.1
Nitab4.5_0000568g0110 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.2e-36 155.2 124 62.1
AUR62022162 Chenopodium quinoa HOM05D001353 ORTHO05D005187 5.5e-36 154.5 124 60.5
FAN02G4091 Fragaria x ananassa HOM05D001353 ORTHO05D005187 1.2e-35 153.3 122 61.5
Zm00001eb119210 Zea mays HOM05D001353 ORTHO05D005187 4.7e-35 151.4 120 65.0
Dinv30464 Davidia involucrata HOM05D001353 ORTHO05D005187 1.8e-34 149.4 104 74.0
Peaxi162Scf00015g00128 Petunia axillaris HOM05D001353 ORTHO05D005187 2.3e-34 149.1 121 62.0
EL10Ac9g22047 Beta vulgaris HOM05D001353 ORTHO05D005187 3.9e-34 148.3 139 54.7
Lj9A510G79 Lonicera japonica HOM05D001353 ORTHO05D005187 9.7e-33 143.7 103 70.9
CARHR091410 Cardamine hirsuta HOM05D001353 ORTHO05D005187 4.8e-32 141.4 121 56.2
AagrBONN_evm.TU.Sc2ySwM_368.659 Anthoceros agrestis HOM05D001353 ORTHO05D005187 4.1e-31 138.3 123 55.3
Carub.0003s1597 Capsella rubella HOM05D001353 ORTHO05D005187 9.1e-31 137.1 121 55.4
HanXRQChr04g0096271 Helianthus annuus HOM05D001353 ORTHO05D005187 1.2e-30 136.7 124 54.8
SMO340G0259 Selaginella moellendorffii HOM05D001353 ORTHO05D005187 2.6e-30 135.6 121 54.5
Solyc02g088200.4 Solanum lycopersicum HOM05D001353 ORTHO05D005187 4.5e-30 134.8 120 55.8
PGSC0003DMG400001428 Solanum tuberosum HOM05D001353 ORTHO05D005187 5.9e-30 134.4 120 56.7
Sopen02g032890 Solanum pennellii HOM05D001353 ORTHO05D005187 1.3e-29 133.3 120 55.8
AL3G28920 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 2.2e-29 132.5 121 53.7
CAN.G206.170 Capsicum annuum HOM05D001353 ORTHO05D005187 2.2e-29 132.5 121 54.5
Mapoly0110s0022 Marchantia polymorpha HOM05D001353 ORTHO05D005187 2.9e-29 132.1 122 56.6
Sp3g14590 Schrenkiella parvula HOM05D001353 ORTHO05D005187 5.0e-29 131.3 121 53.7
Thhalv10021339m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 1.5e-28 129.8 121 55.4
BcaC09g48591 Brassica carinata HOM05D001353 ORTHO05D005187 1.6e-27 126.3 121 50.4
A01p37890 Brassica napus HOM05D001353 ORTHO05D005187 2.1e-27 125.9 121 54.5
C01p48010 Brassica napus HOM05D001353 ORTHO05D005187 2.1e-27 125.9 121 54.5
BraA01t03849Z Brassica rapa HOM05D001353 ORTHO05D005187 2.1e-27 125.9 121 54.5
Nitab4.5_0001591g0200 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.8e-26 122.9 121 56.2
BcaB04g18890 Brassica carinata HOM05D001353 ORTHO05D005187 1.5e-25 119.8 91 64.8
Nitab4.5_0000568g0120 Nicotiana tabacum HOM05D001353 ORTHO05D005187 5.7e-25 117.9 116 56.0
Os01g0231800 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 1.3e-24 116.7 120 50.8
BcaC09g48592 Brassica carinata HOM05D001353 ORTHO05D005187 9.1e-23 110.5 123 46.3
CANSAT56G3175 Cannabis sativa HOM05D001353 ORTHO05D005187 9.1e-23 110.5 120 51.7
CBR_g20332 Chara braunii HOM05D001353 ORTHO05D005187 1.2e-22 110.2 113 49.6
Nitab4.5_0011578g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 6.5e-21 104.4 104 58.7
TWI12G1071 Tripterygium wilfordii HOM05D001353 ORTHO05D005187 1.1e-20 103.6 69 69.6
Glyma.13G355900 Glycine max HOM05D001353 ORTHO05D005187 1.5e-20 103.2 68 76.5
Nitab4.5_0021337g0010 Nicotiana tabacum HOM05D001353 ORTHO05D005187 6.8e-18 94.4 104 52.9
SHI11057 Sapria himalayana HOM05D001353 ORTHO05D005187 8.8e-18 94.0 105 50.5
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 4.4e-17 91.7 121 43.8
Actinidia21695 Actinidia chinensis HOM05D001353 ORTHO05D005187 1.3e-16 90.1 66 71.2
BcaC09g48593 Brassica carinata HOM05D001353 ORTHO05D005187 1.1e-15 87.0 98 43.9
SEGI_15304 Sequoiadendron giganteum HOM05D001353 ORTHO05D005187 7.0e-15 84.3 65 60.0
BolC3t17020H Brassica oleracea HOM05D001353 ORTHO05D005187 9.1e-15 84.0 105 45.7
Cre01.g008000 Chlamydomonas reinhardtii HOM05D001353 ORTHO05D005187 7.7e-14 80.9 133 34.6
ATR0315G092 Amborella trichopoda HOM05D001353 ORTHO05D005187 1.3e-13 80.1 65 61.5
Medtr8g033020 Medicago truncatula HOM05D001353 ORTHO05D005187 8.5e-13 77.4 46 69.6
MCO06G129 Micromonas commoda HOM05D001353 ORTHO05D005187 8.3e-08 60.8 105 32.4
BolC3t17095H Brassica oleracea HOM05D001353 ORTHO05D000017 4.1e-07 58.5 49 59.2
Psat1g005440 Pisum sativum HOM05D001353 ORTHO05D005187 2.7e-06 55.8 32 78.1


User provided reference genes

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