Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5583 Utricularia gibba HOM05D039460 ORTHO05D005049 4.9e-100 367.9 193 100.0
unitig_8.g3990 Utricularia gibba HOM05D000215 ORTHO05D005049 2.2e-47 193.0 220 54.1
unitig_24.g30591 Utricularia gibba HOM05D039460 ORTHO05D422469 9.2e-30 134.4 68 97.1
MSTRG.892 Avicennia marina HOM05D000215 ORTHO05D005049 9.2e-22 107.8 228 36.8
MSTRG.13577 Avicennia marina HOM05D000215 ORTHO05D005049 2.7e-21 106.3 222 34.2
MSTRG.2182 Avicennia marina HOM05D000215 ORTHO05D005049 7.8e-21 104.8 221 33.5
SGA_v2.0_scaffold39G15157 Striga asiatica HOM05D000215 ORTHO05D005049 5.0e-20 102.1 108 52.8
Hma1.2p1_1319F.1_g275230 Hydrangea macrophylla HOM05D000215 ORTHO05D005049 1.5e-16 90.5 211 31.3
Sopen04g002720 Solanum pennellii HOM05D000215 ORTHO05D005049 2.0e-16 90.1 213 33.3
PGSC0003DMG400005987 Solanum tuberosum HOM05D000215 ORTHO05D005049 2.0e-16 90.1 209 33.5
Solyc04g007640.3 Solanum lycopersicum HOM05D000215 ORTHO05D005049 4.4e-16 89.0 213 33.3
unitig_24.g30592 Utricularia gibba HOM05D039460 ORTHO05D419684 5.8e-16 88.6 99 59.6
Dinv05164 Davidia involucrata HOM05D000215 ORTHO05D005049 9.8e-16 87.8 211 30.8
Actinidia14961 Actinidia chinensis HOM05D000215 ORTHO05D005049 1.7e-15 87.0 201 32.8
Dinv12997 Davidia involucrata HOM05D000215 ORTHO05D005049 1.7e-15 87.0 228 31.6
Lj6A747G70 Lonicera japonica HOM05D000215 ORTHO05D005049 3.2e-14 82.8 220 30.0
CSS0030029 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D005049 4.1e-14 82.4 229 28.4
SalBow8G1830 Salvia bowleyana HOM05D000215 ORTHO05D005049 5.4e-14 82.0 176 35.8
Migut.E00414 Erythranthe guttata HOM05D000215 ORTHO05D005049 9.2e-14 81.3 197 34.0
SGA_v2.0_scaffold50G18525 Striga asiatica HOM05D000215 ORTHO05D005049 1.2e-13 80.9 92 45.7
Oeu059505.1 Olea europaea HOM05D000215 ORTHO05D005049 4.6e-13 79.0 157 35.0
Nitab4.5_0001832g0010 Nicotiana tabacum HOM05D000215 ORTHO05D005049 7.8e-13 78.2 194 33.0
CSS0019138 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D005049 1.0e-12 77.8 219 28.8
SGA_v2.0_scaffold38G15075 Striga asiatica HOM05D000215 ORTHO05D005049 1.7e-12 77.0 229 28.8
Lsat_1_v5_gn_8_43480 Lactuca sativa HOM05D000215 ORTHO05D005049 5.1e-12 75.5 208 28.8
Cc11_g08810 Coffea canephora HOM05D000215 ORTHO05D005049 8.6e-12 74.7 237 31.2
Lj3A874G70 Lonicera japonica HOM05D000215 ORTHO05D005049 1.9e-11 73.6 205 30.7
Actinidia36676 Actinidia chinensis HOM05D000215 ORTHO05D005049 2.5e-11 73.2 162 31.5
PGSC0003DMG400030547 Solanum tuberosum HOM05D000215 ORTHO05D005049 9.5e-11 71.2 193 29.5
Nitab4.5_0007425g0030 Nicotiana tabacum HOM05D000215 ORTHO05D005049 1.2e-10 70.9 193 30.6
DCAR_026770 Daucus carota HOM05D000215 ORTHO05D005049 3.6e-10 69.3 227 27.3
Peaxi162Scf00253g01410 Petunia axillaris HOM05D000215 ORTHO05D005049 4.7e-10 68.9 173 31.2
Rhsim09G0098300 Rhododendron simsii HOM05D000215 ORTHO05D005049 6.2e-10 68.6 206 29.1
Manes.17G075700 Manihot esculenta HOM05D000215 ORTHO05D005049 8.1e-10 68.2 226 31.0
Nn4g24128 Nelumbo nucifera HOM05D000215 ORTHO05D005049 1.1e-09 67.8 218 29.4
TAR629G2870 Trochodendron aralioides HOM05D000215 ORTHO05D005049 1.4e-09 67.4 194 31.4
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 1.8e-09 67.0 136 36.8
Nitab4.5_0004776g0040 Nicotiana tabacum HOM05D000215 ORTHO05D005049 2.3e-09 66.6 208 29.3
Solyc05g008230.3 Solanum lycopersicum HOM05D000215 ORTHO05D005049 2.3e-09 66.6 192 28.6
Sopen05g004080 Solanum pennellii HOM05D000215 ORTHO05D005049 3.1e-09 66.2 192 28.6
DCAR_023611 Daucus carota HOM05D000215 ORTHO05D005049 1.5e-08 63.9 217 28.6
Lj4g0017059 Lotus japonicus HOM05D000215 ORTHO05D005049 1.5e-08 63.9 124 35.5
GSVIVG01011767001 Vitis vinifera HOM05D000215 ORTHO05D005049 1.5e-08 63.9 152 30.3
Ah.03g137260 Amaranthus hybridus HOM05D000215 ORTHO05D005049 3.4e-08 62.8 112 35.7
Nn3g18206 Nelumbo nucifera HOM05D000215 ORTHO05D005049 3.4e-08 62.8 175 31.4
Sed0000487 Sechium edule HOM05D000215 ORTHO05D005049 3.4e-08 62.8 203 27.6
CiPaw.05G248800 Carya illinoinensis HOM05D000215 ORTHO05D005049 4.4e-08 62.4 222 28.8
Oeu022839.1 Olea europaea HOM05D000215 ORTHO05D005049 4.4e-08 62.4 158 32.9
Hund24986 Selenicereus undatus HOM05D000215 ORTHO05D005049 4.4e-08 62.4 198 30.3
Sc04g0005660 Simmondsia chinensis HOM05D000215 ORTHO05D005049 4.4e-08 62.4 128 35.9
Sed0005333 Sechium edule HOM05D000215 ORTHO05D005049 1.3e-07 60.8 210 26.7
BcaB03g14864 Brassica carinata HOM05D000215 ORTHO05D005049 1.7e-07 60.5 165 30.3
Potri.010G113900 Populus trichocarpa HOM05D000215 ORTHO05D005049 1.7e-07 60.5 190 28.4
ClCG07G006340 Citrullus lanatus HOM05D000215 ORTHO05D005049 2.2e-07 60.1 233 26.2
Sabra10G0083800 Salix brachista HOM05D000215 ORTHO05D005049 2.2e-07 60.1 183 28.4
Cfa008599 Carpinus fangiana HOM05D000215 ORTHO05D005049 2.9e-07 59.7 196 29.1
Medtr4g485520 Medicago truncatula HOM05D000215 ORTHO05D005049 2.9e-07 59.7 146 34.2
TWI75G0005 Tripterygium wilfordii HOM05D000215 ORTHO05D005049 2.9e-07 59.7 211 27.5
EL10Ac6g14228 Beta vulgaris HOM05D000215 ORTHO05D005049 3.7e-07 59.3 114 35.1
Sabra08G0097400 Salix brachista HOM05D000215 ORTHO05D005049 3.7e-07 59.3 226 27.4
A07p14090 Brassica napus HOM05D000215 ORTHO05D005049 4.9e-07 58.9 88 36.4
C07p20750 Brassica napus HOM05D000215 ORTHO05D005049 6.4e-07 58.5 122 32.8
BolC7t42606H Brassica oleracea HOM05D000215 ORTHO05D005049 6.4e-07 58.5 122 32.8
ECA233G5564 Erigeron canadensis HOM05D000215 ORTHO05D005049 6.4e-07 58.5 180 30.6
HanXRQChr15g0488651 Helianthus annuus HOM05D000215 ORTHO05D005049 6.4e-07 58.5 153 28.8
BcaB07g32300 Brassica carinata HOM05D000215 ORTHO05D005049 1.1e-06 57.8 124 33.9
BcaC05g26214 Brassica carinata HOM05D000215 ORTHO05D005049 1.1e-06 57.8 124 33.9
BcaC06g35010 Brassica carinata HOM05D000215 ORTHO05D005049 1.1e-06 57.8 122 32.8
C05p22240 Brassica napus HOM05D000215 ORTHO05D005049 1.1e-06 57.8 124 33.9
BolC5t30924H Brassica oleracea HOM05D000215 ORTHO05D005049 1.1e-06 57.8 124 33.9
CsaV3_5G013610 Cucumis sativus L. HOM05D000215 ORTHO05D005049 1.1e-06 57.8 238 25.6
C06p45140 Brassica napus HOM05D000215 ORTHO05D005049 1.4e-06 57.4 90 40.0
BolC6t39571H Brassica oleracea HOM05D000215 ORTHO05D005049 1.4e-06 57.4 90 40.0
BraA07t31301Z Brassica rapa HOM05D000215 ORTHO05D005049 1.4e-06 57.4 90 40.0
Potri.008G128600 Populus trichocarpa HOM05D000215 ORTHO05D005049 1.4e-06 57.4 183 27.3
Aqoxy3G04037 Aquilegia oxysepala HOM05D000215 ORTHO05D005049 1.9e-06 57.0 84 44.0
Carub.0001s2253 Capsella rubella HOM05D000215 ORTHO05D005049 1.9e-06 57.0 126 33.3
Ca_18723_v3 Cicer arietinum L. HOM05D000215 ORTHO05D005049 1.9e-06 57.0 146 33.6
Ca_30815_v3 Cicer arietinum L. HOM05D000215 ORTHO05D005049 1.9e-06 57.0 146 33.6
QL01p001904 Quercus lobata HOM05D000215 ORTHO05D005049 1.9e-06 57.0 194 27.3
BraA07t29167Z Brassica rapa HOM05D000215 ORTHO05D005049 2.4e-06 56.6 88 34.1
Eucgr.G02194 Eucalyptus grandis HOM05D000215 ORTHO05D005049 2.4e-06 56.6 174 29.9
Carub.0002s1783 Capsella rubella HOM05D000215 ORTHO05D005049 3.2e-06 56.2 186 30.1
HanXRQChr10g0317191 Helianthus annuus HOM05D000215 ORTHO05D005049 3.2e-06 56.2 144 29.2
AL2G30590 Arabidopsis lyrata HOM05D000215 ORTHO05D005049 4.1e-06 55.8 205 25.4
AT1G23030 Arabidopsis thaliana HOM05D000215 ORTHO05D005049 4.1e-06 55.8 126 33.3
A09p41690 Brassica napus HOM05D000215 ORTHO05D005049 4.1e-06 55.8 124 32.3
BraA09t39658Z Brassica rapa HOM05D000215 ORTHO05D005049 4.1e-06 55.8 124 32.3
AL1G36600 Arabidopsis lyrata HOM05D000215 ORTHO05D005049 5.4e-06 55.5 126 33.3
A07p37430 Brassica napus HOM05D000215 ORTHO05D005049 5.4e-06 55.5 88 39.8
TPR.G35411 Trifolium pratense HOM05D000001 ORTHO05D000003 5.4e-06 55.5 109 36.7
Duzib251G0104 Durio zibethinus HOM05D000215 ORTHO05D005049 7.1e-06 55.1 161 28.6
Lalb_Chr16g0384901 Lupinus albus HOM05D000215 ORTHO05D005049 7.1e-06 55.1 138 34.1
Lsat_1_v5_gn_3_54620 Lactuca sativa HOM05D000215 ORTHO05D005049 9.2e-06 54.7 175 27.4


User provided reference genes

Program Settings