Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5472 Utricularia gibba HOM05D004629 ORTHO05D006604 8.1e-82 307.0 152 100.0
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 1.2e-37 160.2 127 66.9
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 2.1e-37 159.5 127 66.9
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 2.7e-37 159.1 127 66.9
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 8.0e-37 157.5 127 66.9
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 1.0e-36 157.1 127 66.9
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 1.0e-36 157.1 127 66.9
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 2.3e-36 156.0 125 65.6
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.3e-36 156.0 119 68.1
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 2.3e-36 156.0 119 68.1
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 3.0e-36 155.6 147 57.1
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 3.0e-36 155.6 123 67.5
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 3.0e-36 155.6 127 66.1
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 5.2e-36 154.8 125 64.8
Lj2A677G23 Lonicera japonica HOM05D004629 ORTHO05D006604 5.2e-36 154.8 125 65.6
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 6.7e-36 154.5 123 66.7
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 6.7e-36 154.5 127 64.6
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 6.7e-36 154.5 127 65.4
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 8.8e-36 154.1 125 64.8
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 8.8e-36 154.1 127 65.4
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 8.8e-36 154.1 119 67.2
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.2e-35 153.7 125 64.0
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 1.2e-35 153.7 125 65.6
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 1.2e-35 153.7 127 64.6
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 1.2e-35 153.7 125 65.6
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 1.5e-35 153.3 123 65.9
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.5e-35 153.3 125 64.8
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 1.5e-35 153.3 125 64.0
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 1.5e-35 153.3 125 63.2
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 1.5e-35 153.3 123 65.9
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 2.0e-35 152.9 125 65.6
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 2.0e-35 152.9 123 65.9
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 2.0e-35 152.9 127 64.6
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 3.3e-35 152.1 125 64.0
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 3.3e-35 152.1 144 57.6
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 4.4e-35 151.8 123 65.0
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 4.4e-35 151.8 125 63.2
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 5.7e-35 151.4 127 63.0
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 5.7e-35 151.4 125 63.2
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 7.5e-35 151.0 125 63.2
Actinidia39366 Actinidia chinensis HOM05D004629 ORTHO05D006604 9.7e-35 150.6 125 64.8
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 9.7e-35 150.6 125 63.2
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 9.7e-35 150.6 125 63.2
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 9.7e-35 150.6 125 63.2
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 9.7e-35 150.6 125 63.2
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 1.3e-34 150.2 145 55.9
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 1.3e-34 150.2 123 65.0
CDE05G1698 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 1.3e-34 150.2 125 62.4
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 1.3e-34 150.2 117 66.7
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 1.7e-34 149.8 127 63.0
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 1.7e-34 149.8 125 63.2
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.7e-34 149.8 125 63.2
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 2.2e-34 149.4 127 63.0
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 2.2e-34 149.4 125 64.0
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 2.8e-34 149.1 127 62.2
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 2.8e-34 149.1 127 62.2
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 2.8e-34 149.1 127 62.2
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 65.6
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.8e-34 149.1 125 62.4
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 2.8e-34 149.1 125 64.0
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 2.8e-34 149.1 147 55.8
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 2.8e-34 149.1 125 62.4
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.8e-34 149.1 122 64.8
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 2.8e-34 149.1 125 63.2
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 3.7e-34 148.7 127 62.2
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 3.7e-34 148.7 122 63.9
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 3.7e-34 148.7 125 62.4
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 3.7e-34 148.7 144 56.2
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 3.7e-34 148.7 125 60.8
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 4.8e-34 148.3 124 62.9
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 4.8e-34 148.3 123 61.8
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 4.8e-34 148.3 125 62.4
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 4.8e-34 148.3 125 63.2
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 6.3e-34 147.9 122 64.8
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 6.3e-34 147.9 125 62.4
Aqoxy5G02405 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 6.3e-34 147.9 125 62.4
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 6.3e-34 147.9 123 64.2
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 6.3e-34 147.9 144 55.6
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 6.3e-34 147.9 144 55.6
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 6.3e-34 147.9 125 62.4
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 6.3e-34 147.9 125 61.6
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 6.3e-34 147.9 125 61.6
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 8.2e-34 147.5 122 63.9
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 8.2e-34 147.5 125 62.4
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 8.2e-34 147.5 122 63.9
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 8.2e-34 147.5 125 62.4
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 8.2e-34 147.5 144 56.9
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 1.1e-33 147.1 122 64.8
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 1.1e-33 147.1 123 61.8
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 1.1e-33 147.1 123 62.6
Psat2g086520 Pisum sativum HOM05D004629 ORTHO05D006604 1.4e-33 146.7 123 61.8
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 1.8e-33 146.4 123 62.6
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 1.8e-33 146.4 123 61.8
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 1.8e-33 146.4 123 61.8
Aqoxy3G01857 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 2.4e-33 146.0 125 61.6
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 4.1e-33 145.2 122 64.8
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 5.3e-33 144.8 127 60.6
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 9.1e-33 144.1 118 64.4
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 1.2e-32 143.7 125 60.8
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 1.2e-32 143.7 125 60.8
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 1.2e-32 143.7 125 61.6
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 1.0e-31 140.6 125 60.0
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 1.7e-31 139.8 125 60.0
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 2.2e-31 139.4 117 65.0
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 2.2e-31 139.4 123 61.8
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.1e-30 137.1 157 51.0
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 1.1e-30 137.1 125 59.2
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 4.2e-30 135.2 142 51.4
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 4.2e-30 135.2 123 59.3
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 5.5e-30 134.8 142 52.1
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 7.2e-30 134.4 142 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 8.8e-28 127.5 121 58.7
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 8.8e-28 127.5 119 58.0
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 1.4e-25 120.2 149 47.7
DCAR_017261 Daucus carota HOM05D004629 ORTHO05D006604 2.4e-25 119.4 107 58.9
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 2.8e-21 105.9 142 45.1
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 5.2e-20 101.7 131 48.1
CAN.G8813.1 Capsicum annuum HOM05D004629 ORTHO05D006604 1.8e-17 93.2 52 86.5
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 5.4e-17 91.7 113 44.2
Thecc.10G098800 Theobroma cacao HOM05D004629 ORTHO05D006604 9.2e-17 90.9 92 52.2
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 1.2e-13 80.5 120 43.3
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 2.1e-13 79.7 143 36.4
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.4e-12 77.0 49 73.5
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 1.7e-10 70.1 45 68.9
Sabra01G0008400 Salix brachista HOM05D004629 ORTHO05D023587 1.4e-09 67.0 92 45.7


User provided reference genes

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