Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5349 Utricularia gibba HOM05D000104 ORTHO05D017821 2.5e-104 382.1 194 100.0
unitig_8.g3795 Utricularia gibba HOM05D000104 ORTHO05D017821 2.4e-70 269.2 189 73.5
SalBow3G2941 Salvia bowleyana HOM05D000104 ORTHO05D004024 4.5e-53 211.8 188 62.8
Migut.B01772 Erythranthe guttata HOM05D000104 ORTHO05D004024 6.6e-44 181.4 194 58.8
MSTRG.17279 Avicennia marina HOM05D000104 ORTHO05D004024 1.5e-43 180.3 192 54.2
MSTRG.20843 Avicennia marina HOM05D000104 ORTHO05D004024 1.2e-42 177.2 189 57.1
SGA_v2.0_scaffold4G02298 Striga asiatica HOM05D000104 ORTHO05D004024 1.2e-42 177.2 194 52.1
Peaxi162Scf00020g00814 Petunia axillaris HOM05D000104 ORTHO05D004024 5.8e-40 168.3 187 52.4
Solyc01g094800.4 Solanum lycopersicum HOM05D000104 ORTHO05D004024 1.4e-38 163.7 203 49.8
Sopen01g038570 Solanum pennellii HOM05D000104 ORTHO05D004024 1.4e-38 163.7 203 49.8
Dinv43832 Davidia involucrata HOM05D000104 ORTHO05D004024 3.5e-37 159.1 162 53.7
Dinv32495 Davidia involucrata HOM05D000104 ORTHO05D004024 2.3e-36 156.4 182 47.8
CAN.G78.94 Capsicum annuum HOM05D000104 ORTHO05D004024 3.0e-36 156.0 204 47.5
Potri.014G086500 Populus trichocarpa HOM05D000104 ORTHO05D004024 1.4e-33 147.1 187 47.1
Potri.002G160900 Populus trichocarpa HOM05D000104 ORTHO05D004024 1.8e-33 146.7 187 47.6
Cc02_g38210 Coffea canephora HOM05D000104 ORTHO05D004024 4.0e-33 145.6 187 48.7
TWI23G0799 Tripterygium wilfordii HOM05D000104 ORTHO05D004024 4.0e-33 145.6 184 49.5
Prupe.2G172900 Prunus persica HOM05D000104 ORTHO05D004024 6.8e-33 144.8 194 48.5
GSVIVG01026952001 Vitis vinifera HOM05D000104 ORTHO05D004024 4.4e-32 142.1 183 47.5
Actinidia20892 Actinidia chinensis HOM05D000104 ORTHO05D004024 3.7e-31 139.0 173 46.8
MD01G1065800 Malus domestica HOM05D000104 ORTHO05D004024 8.3e-31 137.9 171 49.7
FAN10G0475 Fragaria x ananassa HOM05D000104 ORTHO05D004024 1.1e-30 137.5 186 46.8
FAN10G3702 Fragaria x ananassa HOM05D000104 ORTHO05D004024 1.1e-30 137.5 186 46.8
TWI14G1411 Tripterygium wilfordii HOM05D000104 ORTHO05D004024 1.9e-30 136.7 180 47.2
FvH4_7g14720 Fragaria vesca HOM05D000104 ORTHO05D004024 2.4e-30 136.3 184 46.7
FAN06G2979 Fragaria x ananassa HOM05D000104 ORTHO05D004024 3.2e-30 136.0 184 46.7
Lj7C510T14 Lonicera japonica HOM05D000104 ORTHO05D004024 3.2e-30 136.0 202 45.0
CSS0043783 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004024 4.1e-30 135.6 184 45.7
FAN03G1309 Fragaria x ananassa HOM05D000104 ORTHO05D004024 5.4e-30 135.2 184 46.2
FAN06G0929 Fragaria x ananassa HOM05D000104 ORTHO05D004024 5.4e-30 135.2 184 46.7
FAN01G0653 Fragaria x ananassa HOM05D000104 ORTHO05D004024 7.1e-30 134.8 184 46.2
RcHm_v2.0_Chr1g0356661 Rosa chinensis HOM05D000104 ORTHO05D004024 1.6e-29 133.7 195 43.1
Sabra02G0127900 Salix brachista HOM05D000104 ORTHO05D004024 1.6e-29 133.7 187 45.5
TAR375G0536 Trochodendron aralioides HOM05D000104 ORTHO05D004024 2.1e-29 133.3 186 45.2
TAR374G1169 Trochodendron aralioides HOM05D000104 ORTHO05D004024 4.6e-29 132.1 176 46.6
MD07G1134800 Malus domestica HOM05D000104 ORTHO05D004024 1.7e-28 130.2 194 46.4
CANSAT56G1829 Cannabis sativa HOM05D000104 ORTHO05D004024 6.6e-28 128.3 177 44.6
arahy.Tifrunner.gnm1.ann1.AXD4AC Arachis hypogaea HOM05D000104 ORTHO05D004024 1.1e-27 127.5 182 42.3
Cfa003903 Carpinus fangiana HOM05D000104 ORTHO05D004024 1.5e-27 127.1 187 43.9
Haze_15527 Corylus avellana HOM05D000104 ORTHO05D004024 2.5e-27 126.3 187 43.9
arahy.Tifrunner.gnm1.ann1.8BN0DB Arachis hypogaea HOM05D000104 ORTHO05D004024 5.6e-27 125.2 182 42.3
Ciclev10018438m.g Citrus clementina HOM05D000104 ORTHO05D004024 1.2e-26 124.0 189 42.3
Thecc.01G357200 Theobroma cacao HOM05D000104 ORTHO05D004024 1.2e-26 124.0 196 41.8
Manes.01G255300 Manihot esculenta HOM05D000104 ORTHO05D004024 2.1e-26 123.2 187 42.2
COL.COLO4_12729 Corchorus olitorius HOM05D000104 ORTHO05D004024 6.2e-26 121.7 195 40.0
Eucgr.D02305 Eucalyptus grandis HOM05D000104 ORTHO05D004024 6.2e-26 121.7 181 44.2
Sc01g0003500 Simmondsia chinensis HOM05D000104 ORTHO05D004024 6.2e-26 121.7 197 39.1
Ca_07936_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004024 8.1e-26 121.3 183 42.1
Nn6g33365 Nelumbo nucifera HOM05D000104 ORTHO05D004024 1.4e-25 120.6 174 44.3
Oeu060229.1 Olea europaea HOM05D000104 ORTHO05D017821 1.4e-25 120.6 159 46.5
Atru.chr5.516 Acer truncatum HOM05D000104 ORTHO05D004024 1.8e-25 120.2 188 43.1
Glyma.18G234700 Glycine max HOM05D000104 ORTHO05D004024 1.8e-25 120.2 183 42.1
MBI18_g02828_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D004024 2.3e-25 119.8 175 42.3
Glyma.09G257900 Glycine max HOM05D000104 ORTHO05D004024 3.1e-25 119.4 168 44.6
QL04p053980 Quercus lobata HOM05D000104 ORTHO05D004024 5.2e-25 118.6 190 41.6
EL10Ac1g00397 Beta vulgaris HOM05D000104 ORTHO05D004024 6.8e-25 118.2 185 38.9
Lalb_Chr17g0339491 Lupinus albus HOM05D000104 ORTHO05D004024 8.9e-25 117.9 188 43.6
CiPaw.01G063200 Carya illinoinensis HOM05D000104 ORTHO05D004024 1.2e-24 117.5 186 42.5
CiPaw.02G032300 Carya illinoinensis HOM05D000104 ORTHO05D004024 1.2e-24 117.5 186 44.1
Lj3g0005670 Lotus japonicus HOM05D000104 ORTHO05D004024 1.5e-24 117.1 175 41.1
VMungo0331G0955 Vigna mungo HOM05D000104 ORTHO05D004024 2.0e-24 116.7 183 39.9
Duzib138G0831 Durio zibethinus HOM05D000104 ORTHO05D004024 2.6e-24 116.3 198 40.4
Nn1g01574 Nelumbo nucifera HOM05D000104 ORTHO05D004024 2.6e-24 116.3 184 40.8
AUR62022585 Chenopodium quinoa HOM05D000104 ORTHO05D004024 5.8e-24 115.2 185 37.3
MBI17_g33791_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D004024 5.8e-24 115.2 174 40.8
Manes.05G032800 Manihot esculenta HOM05D000104 ORTHO05D004024 5.8e-24 115.2 186 40.3
Gohir.A07G141800 Gossypium hirsutum HOM05D000104 ORTHO05D004024 7.6e-24 114.8 194 41.8
AUR62004379 Chenopodium quinoa HOM05D000104 ORTHO05D004024 9.9e-24 114.4 173 38.7
Phvul.010G100100 Phaseolus vulgaris HOM05D000104 ORTHO05D004024 2.2e-23 113.2 183 39.9
Psat3g107600 Pisum sativum HOM05D000104 ORTHO05D004024 2.9e-23 112.8 183 41.0
Rhsim01G0163000 Rhododendron simsii HOM05D000104 ORTHO05D004024 3.8e-23 112.5 157 43.3
Ah.05g180470 Amaranthus hybridus HOM05D000104 ORTHO05D004024 4.9e-23 112.1 185 36.2
Gorai.001G168700 Gossypium raimondii HOM05D000104 ORTHO05D004024 6.4e-23 111.7 194 40.7
CsaV3_3G008840 Cucumis sativus L. HOM05D000104 ORTHO05D004024 8.4e-23 111.3 188 41.5
MELO3C006101.2 Cucumis melo HOM05D000104 ORTHO05D004024 1.1e-22 110.9 188 41.0
Lalb_Chr10g0096851 Lupinus albus HOM05D000104 ORTHO05D004024 1.1e-22 110.9 183 41.5
Phvul.008G061000 Phaseolus vulgaris HOM05D000104 ORTHO05D004024 2.4e-22 109.8 198 40.9
ClCG05G001450 Citrullus lanatus HOM05D000104 ORTHO05D004024 4.1e-22 109.0 187 41.2
Glyma.16G035100 Glycine max HOM05D000104 ORTHO05D004024 4.1e-22 109.0 183 39.3
Gohir.A12G108600 Gossypium hirsutum HOM05D000104 ORTHO05D004024 5.4e-22 108.6 196 39.3
Gohir.D07G147500 Gossypium hirsutum HOM05D000104 ORTHO05D004024 5.4e-22 108.6 194 40.2
Lj1g0023113 Lotus japonicus HOM05D000104 ORTHO05D004024 5.4e-22 108.6 169 41.4
Gorai.007G100800 Gossypium raimondii HOM05D000104 ORTHO05D004024 9.2e-22 107.8 197 41.1
VMungo1383G0174 Vigna mungo HOM05D000104 ORTHO05D004024 9.2e-22 107.8 182 41.8
ATR0680G059 Amborella trichopoda HOM05D000104 ORTHO05D004024 1.2e-21 107.5 179 39.7
Gorai.008G121100 Gossypium raimondii HOM05D000104 ORTHO05D004024 1.6e-21 107.1 198 39.4
THA.LOC104803063 Tarenaya hassleriana HOM05D000104 ORTHO05D004024 1.6e-21 107.1 182 44.0
TPR.G37713 Trifolium pratense HOM05D000104 ORTHO05D004024 1.6e-21 107.1 182 40.1
Gohir.D11G094400 Gossypium hirsutum HOM05D000104 ORTHO05D004024 2.7e-21 106.3 197 40.6
Sed0026227 Sechium edule HOM05D000104 ORTHO05D004024 2.7e-21 106.3 187 38.5
Duzib268G0692 Durio zibethinus HOM05D000104 ORTHO05D004024 3.5e-21 105.9 194 36.6
Glyma.07G069400 Glycine max HOM05D000104 ORTHO05D004024 1.0e-20 104.4 182 39.0
Aqoxy7G00269 Aquilegia oxysepala HOM05D000104 ORTHO05D004024 3.0e-20 102.8 177 38.4
Gohir.A11G090000 Gossypium hirsutum HOM05D000104 ORTHO05D004024 3.0e-20 102.8 197 39.1
Medtr8g030550 Medicago truncatula HOM05D000104 ORTHO05D004024 3.0e-20 102.8 172 40.7
Sed0000619 Sechium edule HOM05D000104 ORTHO05D004024 3.9e-20 102.4 187 40.1
Medtr7g078090 Medicago truncatula HOM05D000104 ORTHO05D004024 8.6e-20 101.3 178 38.2
DCAR_005356 Daucus carota HOM05D000104 ORTHO05D004024 2.5e-19 99.8 168 41.1
Gohir.D12G111700 Gossypium hirsutum HOM05D000104 ORTHO05D004024 8.1e-18 94.7 196 37.2
Ca_23613_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004024 8.9e-17 91.3 187 36.4
Hund16655 Selenicereus undatus HOM05D000104 ORTHO05D004024 1.5e-16 90.5 196 38.3
SHI13459 Sapria himalayana HOM05D000104 ORTHO05D004024 2.0e-16 90.1 136 42.6
TPR.G16549 Trifolium pratense HOM05D000104 ORTHO05D004024 2.0e-16 90.1 174 36.8
Nitab4.5_0006018g0100 Nicotiana tabacum HOM05D000104 ORTHO05D004024 4.4e-16 89.0 77 58.4
PGR031G3697 Punica granatum HOM05D000104 ORTHO05D004024 7.6e-16 88.2 151 39.7
ECA234G0162 Erigeron canadensis HOM05D000104 ORTHO05D004024 2.2e-15 86.7 150 40.7
Aa31LG1G27420 Aethionema arabicum HOM05D000104 ORTHO05D004024 2.9e-15 86.3 182 39.6
TPR.G21176 Trifolium pratense HOM05D000104 ORTHO05D017821 4.9e-15 85.5 128 43.0
HPP92_025792 Vanilla planifolia HOM05D000104 ORTHO05D017821 4.9e-15 85.5 134 36.6
HPP92_025786 Vanilla planifolia HOM05D000104 ORTHO05D004024 6.4e-15 85.1 158 34.8
BolC3t15384H Brassica oleracea HOM05D000104 ORTHO05D004024 1.9e-14 83.6 183 35.0
BraA04t18883Z Brassica rapa HOM05D000104 ORTHO05D004024 2.4e-14 83.2 158 39.9
vmacro13264 Vaccinium macrocarpon HOM05D000104 ORTHO05D004024 2.4e-14 83.2 154 36.4
arahy.Tifrunner.gnm1.ann1.03HQ0D Arachis hypogaea HOM05D000104 ORTHO05D004024 3.2e-14 82.8 188 36.7
arahy.Tifrunner.gnm1.ann1.K947VD Arachis hypogaea HOM05D000104 ORTHO05D004024 4.2e-14 82.4 188 36.7
PSO782G4172 Papaver somniferum HOM05D000104 ORTHO05D004024 1.2e-13 80.9 228 34.6
C03p30340 Brassica napus HOM05D000104 ORTHO05D004024 1.6e-13 80.5 183 35.5
BcaC01g05099 Brassica carinata HOM05D000104 ORTHO05D004024 7.8e-13 78.2 183 35.0
SEGI_28802 Sequoiadendron giganteum HOM05D000104 ORTHO05D004024 1.3e-12 77.4 184 34.8
BolC4t28700H Brassica oleracea HOM05D000104 ORTHO05D004024 1.7e-12 77.0 187 36.9
Carub.0004s2871 Capsella rubella HOM05D000104 ORTHO05D004024 3.0e-12 76.3 191 34.0
PSO478G3174 Papaver somniferum HOM05D000104 ORTHO05D004024 3.0e-12 76.3 227 33.0
Psat4g212400 Pisum sativum HOM05D000104 ORTHO05D004024 3.9e-12 75.9 176 36.4
vmacro20931 Vaccinium macrocarpon HOM05D000104 ORTHO05D004024 3.9e-12 75.9 174 36.2
A03p25440 Brassica napus HOM05D000104 ORTHO05D004024 6.6e-12 75.1 183 34.4
CDE06G1551 Ceratophyllum demersum HOM05D000104 ORTHO05D004024 6.6e-12 75.1 155 34.8
CDE02G1733 Ceratophyllum demersum HOM05D000104 ORTHO05D017821 1.9e-11 73.6 164 34.8
C07p31550 Brassica napus HOM05D000104 ORTHO05D004024 9.6e-11 71.2 127 38.6
Rhsim07G0013500 Rhododendron simsii HOM05D000104 ORTHO05D004024 9.6e-11 71.2 189 32.3
BraA03t11763Z Brassica rapa HOM05D000104 ORTHO05D004024 1.6e-10 70.5 173 34.1
Sp4g28080 Schrenkiella parvula HOM05D000104 ORTHO05D004024 2.8e-10 69.7 192 31.8
HanXRQChr16g0522331 Helianthus annuus HOM05D000104 ORTHO05D004024 3.6e-10 69.3 174 32.2
HanXRQChr16g0522401 Helianthus annuus HOM05D000104 ORTHO05D004024 3.6e-10 69.3 174 32.2
BcaC06g34219 Brassica carinata HOM05D000104 ORTHO05D004024 1.8e-09 67.0 184 33.2
HanXRQChr17g0562421 Helianthus annuus HOM05D000104 ORTHO05D004024 2.0e-08 63.5 190 30.5
C04p72040 Brassica napus HOM05D000104 ORTHO05D004024 7.6e-08 61.6 86 44.2
TPR.G27492 Trifolium pratense HOM05D000104 ORTHO05D017821 2.2e-07 60.1 75 48.0
DCAR_025198 Daucus carota HOM05D000104 ORTHO05D004024 4.9e-07 58.9 192 31.8
HanXRQChr04g0121221 Helianthus annuus HOM05D000104 ORTHO05D004024 6.4e-07 58.5 120 35.0
BcaB01g03241 Brassica carinata HOM05D000104 ORTHO05D004024 4.2e-06 55.8 123 35.8
CARHR141280 Cardamine hirsuta HOM05D000104 ORTHO05D004024 4.2e-06 55.8 178 32.0


User provided reference genes

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