Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 2.4e-303 1044.6 522 100.0
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 2.4e-210 735.7 524 70.8
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.3e-208 729.9 542 67.3
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 2.2e-203 712.6 547 66.5
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 8.1e-198 694.1 524 66.2
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 7.6e-196 687.6 521 66.4
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 4.9e-195 684.9 521 66.2
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.7e-193 679.1 534 64.6
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 3.5e-193 678.7 537 63.5
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 2.3e-192 676.0 521 65.6
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 3.0e-192 675.6 523 64.8
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.1e-191 673.7 525 65.3
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 1.5e-191 673.3 526 64.6
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.9e-191 672.9 529 64.1
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 4.3e-191 671.8 524 64.5
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 9.6e-191 670.6 524 63.9
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 9.6e-191 670.6 525 64.2
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 6.2e-190 667.9 524 64.3
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 2.0e-188 662.9 524 63.9
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 7.6e-188 661.0 526 64.6
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 9.9e-188 660.6 537 62.8
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 4.9e-187 658.3 529 64.7
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 1.1e-186 657.1 538 62.1
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 1.4e-186 656.8 524 62.4
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.9e-186 656.4 524 63.0
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 4.2e-186 655.2 537 62.6
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 5.5e-186 654.8 519 64.5
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 1.2e-185 653.7 520 63.5
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.6e-185 653.3 520 63.1
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 1.6e-185 653.3 534 62.9
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 2.1e-185 652.9 536 63.1
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 2.1e-185 652.9 524 62.8
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 3.5e-185 652.1 518 63.1
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 4.6e-185 651.7 525 62.9
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 4.6e-185 651.7 524 62.6
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 6.0e-185 651.4 532 63.3
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 1.0e-184 650.6 541 61.9
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 3.0e-184 649.0 537 61.1
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 3.9e-184 648.7 541 62.1
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 5.1e-184 648.3 524 62.6
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 6.7e-184 647.9 535 61.7
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 1.9e-183 646.4 514 63.0
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 3.3e-183 645.6 537 61.8
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 3.3e-183 645.6 537 61.8
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 9.6e-183 644.0 523 62.1
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 9.6e-183 644.0 523 62.1
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 9.6e-183 644.0 525 61.9
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 9.6e-183 644.0 528 62.1
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 8.2e-182 641.0 521 62.4
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 1.8e-181 639.8 525 61.7
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 4.0e-181 638.6 568 57.6
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 6.9e-181 637.9 567 57.8
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 1.0e-179 634.0 537 60.7
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 1.0e-179 634.0 506 63.4
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 2.2e-179 632.9 524 63.4
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.1e-178 630.6 530 60.9
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 1.6e-177 626.7 537 59.8
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 2.1e-177 626.3 539 61.6
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 2.1e-177 626.3 506 62.1
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 4.3e-175 618.6 530 60.4
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 7.4e-175 617.8 528 59.7
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 1.6e-174 616.7 523 59.5
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.2e-174 616.3 528 59.5
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 2.8e-174 615.9 524 60.9
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.4e-173 613.6 526 61.2
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 4.1e-173 612.1 519 59.0
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.5e-172 610.1 525 60.0
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 3.4e-172 609.0 521 58.7
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 4.5e-172 608.6 525 60.0
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 1.3e-171 607.1 525 59.0
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 8.5e-171 604.4 518 57.7
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 1.9e-170 603.2 549 58.1
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 2.5e-170 602.8 548 57.3
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 2.5e-170 602.8 525 59.0
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.2e-170 602.4 519 58.6
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 3.2e-170 602.4 519 59.3
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 4.6e-169 598.6 529 58.0
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 6.1e-169 598.2 514 58.6
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.0e-168 597.4 536 58.4
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.4e-168 597.0 525 58.7
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.4e-168 597.0 520 59.6
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.3e-168 596.3 525 59.2
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 3.9e-168 595.5 525 58.1
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 5.1e-168 595.1 527 57.9
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 5.1e-168 595.1 560 56.2
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 1.5e-167 593.6 477 62.5
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 9.7e-167 590.9 546 57.0
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 2.8e-166 589.3 523 59.7
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 3.7e-166 589.0 496 61.3
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.8e-165 586.6 530 57.9
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 8.5e-163 577.8 520 56.9
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.4e-162 577.0 508 58.9
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 2.5e-162 576.2 523 58.5
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 3.2e-162 575.9 511 58.3
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 4.7e-161 572.0 529 56.9
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 3.0e-160 569.3 528 56.8
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 3.9e-160 568.9 529 56.7
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 3.3e-159 565.8 528 57.2
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 1.5e-156 557.0 521 57.0
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 4.5e-156 555.4 520 55.4
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 2.5e-154 549.7 516 56.8
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 5.5e-154 548.5 532 53.6
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 2.3e-152 543.1 530 53.8
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 1.1e-149 534.3 520 52.9
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 5.9e-148 528.5 438 60.7
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 2.0e-143 513.5 449 59.2
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 3.7e-142 509.2 456 58.1
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 3.1e-141 506.1 504 53.4
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 6.1e-137 491.9 449 57.2
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 5.2e-120 435.6 364 60.7
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 3.4e-119 433.0 521 46.8
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 2.9e-118 429.9 535 44.9
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 6.0e-116 422.2 460 50.2
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 3.1e-112 409.8 508 41.9
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 8.9e-112 408.3 413 53.3
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 3.3e-98 363.2 383 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 5.2e-96 355.9 492 40.9
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 2.1e-89 334.0 477 44.2
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 7.7e-55 219.2 141 75.2
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 1.0e-46 192.2 124 74.2
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 5.5e-45 186.4 446 34.3
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 9.1e-32 142.5 138 55.1
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.7e-25 121.7 81 71.6
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 2.2e-25 121.3 259 33.6
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-22 110.9 174 35.1
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 7.2e-21 106.3 85 61.2
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 2.7e-20 104.4 175 41.7
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 2.3e-19 101.3 80 62.5
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 1.5e-18 98.6 89 53.9
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 9.8e-18 95.9 74 64.9
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 7.2e-13 79.7 166 30.1
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-10 70.5 53 56.6
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 2.0e-07 61.6 46 67.4
MCO11G935 Micromonas commoda HOM05D005650 ORTHO05D007020 1.3e-06 58.9 137 30.7


User provided reference genes

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