Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 8.6e-148 526.9 261 100.0
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 2.3e-76 289.7 165 78.8
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 2.3e-76 289.7 219 68.0
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.3e-76 289.7 219 68.0
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 3.3e-75 285.8 164 80.5
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 5.7e-75 285.0 164 78.7
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 5.7e-75 285.0 165 77.6
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 7.4e-75 284.6 261 59.0
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 7.4e-75 284.6 187 73.3
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 7.4e-75 284.6 187 73.8
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 7.4e-75 284.6 165 77.6
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 9.7e-75 284.3 202 67.3
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.3e-74 283.9 165 78.2
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 2.2e-74 283.1 165 77.0
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 8.2e-74 281.2 239 61.5
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.4e-73 280.4 246 60.2
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 5.3e-73 278.5 188 72.3
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.2e-72 277.3 221 65.6
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 2.0e-72 276.6 218 63.8
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 2.0e-72 276.6 188 69.1
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 2.6e-72 276.2 234 60.3
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 3.4e-72 275.8 198 68.2
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 3.4e-72 275.8 248 57.3
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 4.5e-72 275.4 188 71.8
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.5e-72 275.4 183 72.7
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 4.5e-72 275.4 213 63.4
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 4.5e-72 275.4 213 65.3
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 5.9e-72 275.0 228 61.8
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 5.9e-72 275.0 161 80.1
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 1.0e-71 274.2 213 67.1
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.3e-71 273.9 212 65.1
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 1.3e-71 273.9 185 69.2
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 1.7e-71 273.5 162 79.6
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.7e-71 273.5 289 54.0
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 2.2e-71 273.1 204 66.2
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 2.2e-71 273.1 226 61.5
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 2.2e-71 273.1 196 69.4
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 2.2e-71 273.1 252 56.3
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 2.9e-71 272.7 223 62.8
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 2.9e-71 272.7 189 70.9
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.9e-71 272.7 162 79.0
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 3.8e-71 272.3 221 64.7
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 6.5e-71 271.6 197 69.0
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 8.5e-71 271.2 247 57.9
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.1e-70 270.8 192 69.8
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 1.1e-70 270.8 200 65.5
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.1e-70 270.8 161 77.6
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 1.4e-70 270.4 216 64.4
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 1.4e-70 270.4 153 81.0
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.4e-70 270.4 194 66.5
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 1.4e-70 270.4 242 60.7
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.4e-70 270.4 161 76.4
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 1.9e-70 270.0 255 54.5
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 1.9e-70 270.0 207 63.3
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.5e-70 269.6 213 63.8
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 3.2e-70 269.2 212 64.6
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 3.2e-70 269.2 224 62.5
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 4.2e-70 268.9 187 70.6
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 4.2e-70 268.9 189 69.3
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 4.2e-70 268.9 205 62.9
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 4.2e-70 268.9 199 64.8
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 7.2e-70 268.1 199 67.8
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 7.2e-70 268.1 200 65.0
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 9.4e-70 267.7 157 79.0
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 9.4e-70 267.7 226 62.8
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 9.4e-70 267.7 242 59.1
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 1.2e-69 267.3 188 67.6
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 1.6e-69 266.9 243 59.3
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 1.6e-69 266.9 231 60.2
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 1.6e-69 266.9 238 61.3
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.6e-69 266.9 200 65.0
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 2.7e-69 266.2 247 57.1
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 3.6e-69 265.8 222 62.2
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 3.6e-69 265.8 203 64.5
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 6.1e-69 265.0 182 70.3
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 7.9e-69 264.6 150 80.7
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.0e-68 264.2 161 77.0
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.0e-68 264.2 161 77.0
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.0e-68 264.2 161 77.0
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 1.8e-68 263.5 194 68.0
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.8e-68 263.5 150 80.0
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.8e-68 263.5 205 63.4
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.8e-68 263.5 205 63.4
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.3e-68 263.1 257 55.3
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 2.3e-68 263.1 192 69.3
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 3.0e-68 262.7 247 56.3
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 3.9e-68 262.3 199 68.3
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 5.1e-68 261.9 211 63.5
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.5e-67 260.4 192 67.7
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 2.0e-67 260.0 215 63.7
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 2.6e-67 259.6 152 81.6
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 7.4e-67 258.1 211 63.0
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 7.4e-67 258.1 228 62.7
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 1.7e-66 256.9 207 64.3
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 1.1e-65 254.2 161 73.9
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 1.1e-65 254.2 193 63.7
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 2.4e-65 253.1 189 67.7
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 4.1e-65 252.3 189 66.7
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 4.1e-65 252.3 189 66.1
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 9.1e-65 251.1 231 58.9
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 5.0e-63 245.4 159 74.2
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 2.5e-62 243.0 184 64.7
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 2.4e-57 226.5 195 64.6
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.4e-57 226.5 209 56.5
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 2.1e-53 213.4 152 70.4
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 2.1e-53 213.4 161 63.4
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.8e-52 210.3 184 57.1
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 1.5e-51 207.2 150 64.7
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 2.2e-50 203.4 160 62.5
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 5.9e-48 195.3 133 67.7
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 4.7e-45 185.7 113 73.5
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 8.0e-45 184.9 139 62.6
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 3.4e-43 179.5 132 62.9
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 7.5e-43 178.3 135 62.2
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 7.0e-41 171.8 310 39.7
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.6e-40 170.6 160 56.2
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 7.5e-35 151.8 140 61.4
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.8e-35 151.4 136 58.8
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 2.7e-32 143.3 74 81.1
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.2e-28 129.0 98 62.2
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.2e-28 129.0 98 62.2
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 2.3e-20 103.6 95 57.9
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 4.0e-20 102.8 127 43.3
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 4.0e-20 102.8 141 41.1
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.2e-18 97.1 175 34.9
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 8.3e-18 95.1 172 38.4
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 1.6e-16 90.9 170 35.9
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 6.0e-16 89.0 127 36.2
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 2.8e-13 80.1 138 35.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.1e-12 78.2 104 52.9
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 4.6e-08 62.8 46 73.9
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 2.3e-07 60.5 31 80.6


User provided reference genes

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