Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20312 Utricularia gibba HOM05D004148 ORTHO05D004709 4.4e-161 571.2 292 100.0
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 3.5e-89 332.4 345 54.2
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 8.5e-88 327.8 345 54.5
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 1.8e-82 310.1 345 52.8
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 2.3e-80 303.1 346 52.6
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 2.4e-74 283.1 342 47.7
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 8.6e-64 248.1 346 44.2
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 4.3e-63 245.7 346 44.5
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 2.1e-62 243.4 344 44.5
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 4.7e-62 242.3 346 43.6
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 3.1e-61 239.6 360 42.8
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 6.8e-61 238.4 346 43.4
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 2.0e-60 236.9 351 42.7
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 2.6e-60 236.5 346 43.1
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 9.8e-60 234.6 360 43.1
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 1.3e-59 234.2 360 41.1
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 1.6e-57 227.3 359 39.0
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 2.3e-56 223.4 356 41.0
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 8.6e-56 221.5 338 43.8
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 8.6e-56 221.5 344 42.4
Haze_23628 Corylus avellana HOM05D004148 ORTHO05D004709 9.5e-55 218.0 358 40.5
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 3.6e-54 216.1 358 40.2
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 1.4e-53 214.2 363 39.9
CSS0039701 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 1.8e-53 213.8 311 44.4
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 1.8e-53 213.8 349 38.4
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 8.9e-53 211.5 361 39.1
MD03G1162400 Malus domestica HOM05D004148 ORTHO05D004709 8.9e-53 211.5 336 40.8
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 1.2e-52 211.1 345 38.8
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 1.5e-52 210.7 340 41.2
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 1.5e-52 210.7 345 39.7
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 2.0e-52 210.3 343 39.7
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 2.6e-52 209.9 347 38.6
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 5.8e-52 208.8 328 41.5
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 5.8e-52 208.8 347 39.8
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 7.6e-52 208.4 345 39.4
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 9.9e-52 208.0 355 40.0
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 1.7e-51 207.2 336 39.0
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 2.2e-51 206.8 361 38.0
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 4.9e-51 205.7 345 37.7
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea HOM05D004148 ORTHO05D004709 1.1e-50 204.5 345 39.1
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 2.4e-50 203.4 320 40.0
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 3.2e-50 203.0 322 38.8
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 4.1e-50 202.6 358 36.9
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 9.2e-50 201.4 361 37.7
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 9.2e-50 201.4 359 38.4
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.2e-49 201.1 322 39.1
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.6e-49 200.7 320 39.4
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 1.6e-49 200.7 359 38.2
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 1.6e-49 200.7 326 40.2
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.1e-49 200.3 355 38.3
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 3.5e-49 199.5 360 37.2
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 3.5e-49 199.5 356 36.0
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 4.6e-49 199.1 364 36.0
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 4.6e-49 199.1 336 38.7
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 4.6e-49 199.1 362 36.5
Eucgr.B03795 Eucalyptus grandis HOM05D004148 ORTHO05D004709 6.0e-49 198.7 363 36.6
CSS0039756 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 7.8e-49 198.4 292 45.5
Cpa.g.sc103.97 Carica papaya HOM05D004148 ORTHO05D004709 1.7e-48 197.2 340 39.4
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 5.1e-48 195.7 357 37.5
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 5.1e-48 195.7 365 36.7
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 6.6e-48 195.3 353 36.3
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 1.1e-47 194.5 351 37.0
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 1.5e-47 194.1 335 39.7
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.5e-47 193.4 344 36.9
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 3.3e-47 193.0 335 37.9
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 3.3e-47 193.0 362 39.0
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 1.2e-46 191.0 351 36.5
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 1.6e-46 190.7 349 38.4
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 2.1e-46 190.3 335 38.5
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 4.7e-46 189.1 342 37.4
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 6.2e-46 188.7 367 36.5
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 1.8e-45 187.2 355 36.6
CARHR108980 Cardamine hirsuta HOM05D004148 ORTHO05D004709 1.8e-45 187.2 328 38.4
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 2.4e-45 186.8 353 37.4
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 5.2e-45 185.7 325 38.8
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 8.9e-45 184.9 329 39.2
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 8.9e-45 184.9 354 36.7
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 8.9e-45 184.9 339 37.5
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 1.2e-44 184.5 354 36.7
BolSC21t60233H Brassica oleracea HOM05D004148 ORTHO05D004709 1.5e-44 184.1 325 38.5
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 2.6e-44 183.3 336 37.5
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 2.9e-43 179.9 342 36.5
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 1.6e-41 174.1 367 33.8
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 4.6e-41 172.6 359 36.8
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 6.0e-41 172.2 345 36.8
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 8.7e-40 168.3 323 35.0
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 1.1e-39 167.9 327 34.9
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 4.5e-36 156.0 341 33.1
HPP92_019532 Vanilla planifolia HOM05D004148 ORTHO05D004709 2.2e-35 153.7 350 31.7
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 5.4e-34 149.1 510 28.6
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 2.3e-32 143.7 378 32.5
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 3.7e-30 136.3 172 44.2
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 1.8e-29 134.0 305 32.5
vmacro04063 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 4.0e-29 132.9 252 37.3
Carub.0005s0934 Capsella rubella HOM05D004148 ORTHO05D004709 7.6e-28 128.6 258 36.4
COL.COLO4_25330 Corchorus olitorius HOM05D004148 ORTHO05D004709 2.1e-22 110.5 245 33.9
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 2.8e-22 110.2 194 36.6
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 4.0e-21 106.3 120 46.7
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 1.5e-20 104.4 104 51.0
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 1.3e-19 101.3 116 47.4
A06p26680 Brassica napus HOM05D004148 ORTHO05D004709 1.7e-19 100.9 130 43.8
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 1.1e-18 98.2 126 44.4
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 7.1e-18 95.5 184 35.3
SHI25296 Sapria himalayana HOM05D004148 ORTHO05D004709 7.9e-17 92.0 217 33.6
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 3.0e-16 90.1 118 39.8
SHI25295 Sapria himalayana HOM05D004148 ORTHO05D004709 3.0e-16 90.1 180 35.0
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 3.9e-16 89.7 110 43.6
C05p34090 Brassica napus HOM05D004148 ORTHO05D004709 5.1e-16 89.4 80 60.0
FvH4_3g27031 Fragaria vesca HOM05D004148 ORTHO05D004709 5.7e-15 85.9 124 40.3
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 3.4e-12 76.6 127 36.2
BraA06t25600Z Brassica rapa HOM05D004148 ORTHO05D004709 1.3e-11 74.7 96 45.8
Os04g0566900 Oryza sativa ssp. japonica HOM05D004148 ORTHO05D004709 5.0e-11 72.8 146 32.9
BolC8t48007H Brassica oleracea HOM05D004148 ORTHO05D004709 4.2e-10 69.7 115 42.6
Thhalv10029231m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 2.1e-09 67.4 139 36.7
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 1.0e-08 65.1 76 40.8
A08p06640 Brassica napus HOM05D004148 ORTHO05D004709 8.7e-08 62.0 60 60.0
FAN16G3212 Fragaria x ananassa HOM05D004148 ORTHO05D004709 2.5e-07 60.5 260 26.9
BraA07t28462Z Brassica rapa HOM05D004148 ORTHO05D004709 2.8e-06 57.0 60 56.7
A08p03240 Brassica napus HOM05D004148 ORTHO05D004709 3.7e-06 56.6 59 54.2


User provided reference genes

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