Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g97 Utricularia gibba HOM05D002471 ORTHO05D003712 3.6e-106 388.3 198 100.0
COL.COLO4_32627 Corchorus olitorius HOM05D002471 ORTHO05D003712 6.5e-63 244.6 233 59.7
Nitab4.5_0002740g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 6.0e-61 238.0 145 80.7
Lj4g0010035 Lotus japonicus HOM05D002471 ORTHO05D003712 2.3e-60 236.1 140 82.1
Nitab4.5_0000292g0080 Nicotiana tabacum HOM05D002471 ORTHO05D003712 2.3e-60 236.1 141 82.3
Solyc01g107880.3 Solanum lycopersicum HOM05D002471 ORTHO05D003712 2.3e-60 236.1 141 81.6
Sopen01g050050 Solanum pennellii HOM05D002471 ORTHO05D003712 2.3e-60 236.1 141 81.6
PGSC0003DMG400025880 Solanum tuberosum HOM05D002471 ORTHO05D003712 2.3e-60 236.1 141 81.6
arahy.Tifrunner.gnm1.ann1.92SQ9J Arachis hypogaea HOM05D002471 ORTHO05D003712 5.1e-60 235.0 140 82.1
arahy.Tifrunner.gnm1.ann1.IV52NX Arachis hypogaea HOM05D002471 ORTHO05D003712 5.1e-60 235.0 140 82.1
Migut.B00367 Erythranthe guttata HOM05D002471 ORTHO05D003712 5.1e-60 235.0 141 81.6
Lj9C356G4 Lonicera japonica HOM05D002471 ORTHO05D003712 6.7e-60 234.6 140 81.4
Atru.chr5.2641 Acer truncatum HOM05D002471 ORTHO05D003712 8.7e-60 234.2 140 81.4
Atru.chr5.2647 Acer truncatum HOM05D002471 ORTHO05D003712 8.7e-60 234.2 140 81.4
MSTRG.16728 Avicennia marina HOM05D002471 ORTHO05D003712 8.7e-60 234.2 140 81.4
Cc02_g19010 Coffea canephora HOM05D002471 ORTHO05D003712 8.7e-60 234.2 140 80.7
PGR142G0507 Punica granatum HOM05D002471 ORTHO05D003712 1.1e-59 233.8 140 81.4
Cfa004547 Carpinus fangiana HOM05D002471 ORTHO05D003712 1.5e-59 233.4 140 81.4
Haze_10112 Corylus avellana HOM05D002471 ORTHO05D003712 1.5e-59 233.4 140 81.4
Haze_10115 Corylus avellana HOM05D002471 ORTHO05D003712 1.5e-59 233.4 140 81.4
GSVIVG01031710001 Vitis vinifera HOM05D002471 ORTHO05D003712 1.5e-59 233.4 140 81.4
Eucgr.I01130 Eucalyptus grandis HOM05D002471 ORTHO05D003712 1.9e-59 233.0 140 81.4
Nitab4.5_0001220g0010 Nicotiana tabacum HOM05D002471 ORTHO05D003712 1.9e-59 233.0 145 79.3
Glyma.07G215200 Glycine max HOM05D002471 ORTHO05D003712 2.5e-59 232.6 140 80.7
Lalb_Chr05g0219311 Lupinus albus HOM05D002471 ORTHO05D003712 2.5e-59 232.6 140 80.7
CiPaw.06G171300 Carya illinoinensis HOM05D002471 ORTHO05D003712 3.3e-59 232.3 139 81.3
Peaxi162Scf00016g00211 Petunia axillaris HOM05D002471 ORTHO05D003712 3.3e-59 232.3 140 80.7
Potri.001G304100 Populus trichocarpa HOM05D002471 ORTHO05D003712 3.3e-59 232.3 141 79.4
Dinv42173 Davidia involucrata HOM05D002471 ORTHO05D003712 5.7e-59 231.5 140 80.7
Duzib132G0131 Durio zibethinus HOM05D002471 ORTHO05D003712 5.7e-59 231.5 138 82.6
CSS0003761 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 7.4e-59 231.1 140 80.7
Cpa.g.sc200.25 Carica papaya HOM05D002471 ORTHO05D003712 9.6e-59 230.7 140 80.0
Phvul.003G047600 Phaseolus vulgaris HOM05D002471 ORTHO05D003712 9.6e-59 230.7 140 80.7
SalBow6G6213 Salvia bowleyana HOM05D002471 ORTHO05D003712 9.6e-59 230.7 140 80.7
Lalb_Chr16g0384861 Lupinus albus HOM05D002471 ORTHO05D003712 1.3e-58 230.3 143 78.3
MD05G1085000 Malus domestica HOM05D002471 ORTHO05D003712 1.3e-58 230.3 140 80.0
Manes.10G078500 Manihot esculenta HOM05D002471 ORTHO05D003712 1.3e-58 230.3 138 81.2
Thecc.02G103800 Theobroma cacao HOM05D002471 ORTHO05D003712 1.3e-58 230.3 140 80.0
THA.LOC104807837 Tarenaya hassleriana HOM05D002471 ORTHO05D003712 1.6e-58 229.9 138 81.9
Dinv15736 Davidia involucrata HOM05D002471 ORTHO05D003712 2.1e-58 229.6 140 80.0
Prupe.8G129300 Prunus persica HOM05D002471 ORTHO05D003712 2.1e-58 229.6 140 80.0
Rhsim11G0163900 Rhododendron simsii HOM05D002471 ORTHO05D003712 2.1e-58 229.6 150 74.7
CiPaw.05G008400 Carya illinoinensis HOM05D002471 ORTHO05D003712 2.8e-58 229.2 140 81.4
Hund00120 Selenicereus undatus HOM05D002471 ORTHO05D003712 2.8e-58 229.2 158 73.4
Gohir.A03G187800 Gossypium hirsutum HOM05D002471 ORTHO05D003712 3.7e-58 228.8 138 80.4
Gohir.D13G040900 Gossypium hirsutum HOM05D002471 ORTHO05D003712 3.7e-58 228.8 149 75.8
Gorai.005G236600 Gossypium raimondii HOM05D002471 ORTHO05D003712 3.7e-58 228.8 138 80.4
Gorai.013G045900 Gossypium raimondii HOM05D002471 ORTHO05D003712 3.7e-58 228.8 149 75.8
Hund06339 Selenicereus undatus HOM05D002471 ORTHO05D003712 3.7e-58 228.8 140 80.0
SGA_v2.0_scaffold90G27611 Striga asiatica HOM05D002471 ORTHO05D003712 3.7e-58 228.8 134 82.8
Potri.009G099400 Populus trichocarpa HOM05D002471 ORTHO05D003712 4.8e-58 228.4 141 80.1
QL11p034831 Quercus lobata HOM05D002471 ORTHO05D003712 4.8e-58 228.4 140 80.0
VMungo0251G3159 Vigna mungo HOM05D002471 ORTHO05D003712 4.8e-58 228.4 140 80.0
Actinidia17877 Actinidia chinensis HOM05D002471 ORTHO05D003712 6.3e-58 228.0 140 77.9
Gohir.A13G042500 Gossypium hirsutum HOM05D002471 ORTHO05D003712 6.3e-58 228.0 138 81.2
Ah.01g017910 Amaranthus hybridus HOM05D002471 ORTHO05D003712 8.2e-58 227.6 168 69.6
CAN.G1231.31 Capsicum annuum HOM05D002471 ORTHO05D003712 8.2e-58 227.6 141 79.4
FAN27G3397 Fragaria x ananassa HOM05D002471 ORTHO05D003712 8.2e-58 227.6 140 80.0
Glyma.02G103800 Glycine max HOM05D002471 ORTHO05D003712 8.2e-58 227.6 140 80.0
Gohir.D02G208600 Gossypium hirsutum HOM05D002471 ORTHO05D003712 8.2e-58 227.6 138 79.7
Lsat_1_v5_gn_0_4161 Lactuca sativa HOM05D002471 ORTHO05D003712 8.2e-58 227.6 137 81.8
RcHm_v2.0_Chr6g0256621 Rosa chinensis HOM05D002471 ORTHO05D003712 8.2e-58 227.6 140 80.0
Ah.01g010650 Amaranthus hybridus HOM05D002471 ORTHO05D003712 1.1e-57 227.3 173 67.6
Lj9A355T76 Lonicera japonica HOM05D002471 ORTHO05D003712 1.1e-57 227.3 133 83.5
Manes.07G072800 Manihot esculenta HOM05D002471 ORTHO05D003712 1.1e-57 227.3 138 79.7
Psat7g126400 Pisum sativum HOM05D002471 ORTHO05D003712 1.1e-57 227.3 141 78.0
TWI31G1427 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 1.1e-57 227.3 140 78.6
AUR62010254 Chenopodium quinoa HOM05D002471 ORTHO05D003712 1.4e-57 226.9 173 67.6
AUR62013236 Chenopodium quinoa HOM05D002471 ORTHO05D003712 1.4e-57 226.9 173 67.6
Ciclev10027715m.g Citrus clementina HOM05D002471 ORTHO05D003712 1.4e-57 226.9 140 80.0
Duzib248G1549 Durio zibethinus HOM05D002471 ORTHO05D003712 1.4e-57 226.9 138 80.4
FAN15G2265 Fragaria x ananassa HOM05D002471 ORTHO05D003712 1.4e-57 226.9 140 80.0
Oeu010384.1 Olea europaea HOM05D002471 ORTHO05D003712 1.4e-57 226.9 138 80.4
EL10Ac9g22322 Beta vulgaris HOM05D002471 ORTHO05D003712 1.8e-57 226.5 165 69.7
Duzib052G0365 Durio zibethinus HOM05D002471 ORTHO05D003712 1.8e-57 226.5 138 81.9
FAN20G0068 Fragaria x ananassa HOM05D002471 ORTHO05D003712 1.8e-57 226.5 140 79.3
FAN24G2894 Fragaria x ananassa HOM05D002471 ORTHO05D003712 2.4e-57 226.1 140 79.3
Nn1g04785 Nelumbo nucifera HOM05D002471 ORTHO05D003712 2.4e-57 226.1 150 75.3
TAR381G0378 Trochodendron aralioides HOM05D002471 ORTHO05D003712 2.4e-57 226.1 198 60.6
TAR628G0580 Trochodendron aralioides HOM05D002471 ORTHO05D003712 2.4e-57 226.1 148 75.0
Actinidia00425 Actinidia chinensis HOM05D002471 ORTHO05D003712 3.1e-57 225.7 140 77.1
TPR.G12707 Trifolium pratense HOM05D002471 ORTHO05D003712 3.1e-57 225.7 132 82.6
Ca_18711_v3 Cicer arietinum L. HOM05D002471 ORTHO05D003712 4.1e-57 225.3 136 80.1
ECA236G4146 Erigeron canadensis HOM05D002471 ORTHO05D003712 4.1e-57 225.3 138 79.0
MD00G1138200 Malus domestica HOM05D002471 ORTHO05D003712 4.1e-57 225.3 140 77.9
Medtr4g085550 Medicago truncatula HOM05D002471 ORTHO05D003712 5.3e-57 224.9 132 82.6
Sabra09G0075700 Salix brachista HOM05D002471 ORTHO05D003712 5.3e-57 224.9 141 78.0
vmacro19516 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 5.3e-57 224.9 140 77.9
CANSAT25G1275 Cannabis sativa HOM05D002471 ORTHO05D003712 6.9e-57 224.6 140 78.6
FvH4_2g05730 Fragaria vesca HOM05D002471 ORTHO05D003712 9.0e-57 224.2 140 79.3
HanXRQChr09g0250641 Helianthus annuus HOM05D002471 ORTHO05D003712 1.2e-56 223.8 140 77.9
Nn5g30358 Nelumbo nucifera HOM05D002471 ORTHO05D003712 1.2e-56 223.8 150 74.7
ECA234G3000 Erigeron canadensis HOM05D002471 ORTHO05D003712 1.5e-56 223.4 140 77.9
Sc14g0001830 Simmondsia chinensis HOM05D002471 ORTHO05D003712 1.5e-56 223.4 148 74.3
HanXRQChr03g0070141 Helianthus annuus HOM05D002471 ORTHO05D003712 2.0e-56 223.0 147 74.8
Sc14g0001810 Simmondsia chinensis HOM05D002471 ORTHO05D003712 2.0e-56 223.0 148 73.6
Oeu048698.2 Olea europaea HOM05D002471 ORTHO05D003712 3.4e-56 222.2 139 78.4
SpUn0912_0010 Schrenkiella parvula HOM05D002471 ORTHO05D003712 3.4e-56 222.2 140 77.9
DCAR_022010 Daucus carota HOM05D002471 ORTHO05D003712 4.5e-56 221.9 143 76.2
Thhalv10024280m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 4.5e-56 221.9 140 77.9
Sabra16G0190800 Salix brachista HOM05D002471 ORTHO05D003712 4.5e-56 221.9 152 77.0
MSTRG.20171 Avicennia marina HOM05D002471 ORTHO05D003712 5.9e-56 221.5 131 80.9
TWI79G1465 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 5.9e-56 221.5 141 75.9
Zm00001eb387290 Zea mays HOM05D002471 ORTHO05D003712 5.9e-56 221.5 139 78.4
AL7G17300 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 7.6e-56 221.1 140 77.9
AT4G34100 Arabidopsis thaliana HOM05D002471 ORTHO05D003712 7.6e-56 221.1 140 77.9
Lsat_1_v5_gn_5_115740 Lactuca sativa HOM05D002471 ORTHO05D003712 7.6e-56 221.1 147 75.5
Carub.0007s0632 Capsella rubella HOM05D002471 ORTHO05D003712 1.0e-55 220.7 140 77.9
HanXRQChr16g0515001 Helianthus annuus HOM05D002471 ORTHO05D003712 1.3e-55 220.3 140 76.4
HanXRQChr16g0509961 Helianthus annuus HOM05D002471 ORTHO05D003712 1.7e-55 219.9 149 74.5
Aqoxy5G01185 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 2.2e-55 219.5 148 74.3
BcaNung03791 Brassica carinata HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.9
A01p04350 Brassica napus HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.9
C01p04750 Brassica napus HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.9
BolC1t00459H Brassica oleracea HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.9
BraA01t00424Z Brassica rapa HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.9
CARHR242210 Cardamine hirsuta HOM05D002471 ORTHO05D003712 2.2e-55 219.5 140 77.1
Sed0014443 Sechium edule HOM05D002471 ORTHO05D003712 3.8e-55 218.8 142 76.1
ClCG02G006070 Citrullus lanatus HOM05D002471 ORTHO05D003712 8.4e-55 217.6 140 76.4
CDE02G3215 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 1.1e-54 217.2 141 75.9
MELO3C018461.2 Cucumis melo HOM05D002471 ORTHO05D003712 1.1e-54 217.2 140 75.7
CsaV3_7G008470 Cucumis sativus L. HOM05D002471 ORTHO05D003712 1.1e-54 217.2 140 75.7
Os06g0639100 Oryza sativa ssp. japonica HOM05D002471 ORTHO05D003712 1.1e-54 217.2 139 77.0
SHI05318 Sapria himalayana HOM05D002471 ORTHO05D003712 1.9e-54 216.5 138 76.8
SEGI_06740 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 1.9e-54 216.5 141 75.2
vmacro02027 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 1.9e-54 216.5 140 75.0
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 2.5e-54 216.1 140 75.7
CDE04G3492 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 2.5e-54 216.1 141 76.6
Sed0022765 Sechium edule HOM05D002471 ORTHO05D003712 4.2e-54 215.3 140 75.0
ATR0762G060 Amborella trichopoda HOM05D002471 ORTHO05D003712 5.5e-54 214.9 141 74.5
Oeu028240.1 Olea europaea HOM05D002471 ORTHO05D003712 5.5e-54 214.9 138 75.4
TWI75G1110 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 5.5e-54 214.9 160 69.4
Zm00001eb275450 Zea mays HOM05D002471 ORTHO05D003712 5.5e-54 214.9 138 76.1
DCAR_029075 Daucus carota HOM05D002471 ORTHO05D003712 7.2e-54 214.5 157 71.3
unitig_60.g25459 Utricularia gibba HOM05D002471 ORTHO05D003712 7.2e-54 214.5 150 73.3
Rhsim05G0086900 Rhododendron simsii HOM05D002471 ORTHO05D003712 9.3e-54 214.2 140 75.0
PSO170G0111 Papaver somniferum HOM05D002471 ORTHO05D003712 2.1e-53 213.0 150 71.3
PSO210G1934 Papaver somniferum HOM05D002471 ORTHO05D003712 2.1e-53 213.0 150 71.3
PSO541G5863 Papaver somniferum HOM05D002471 ORTHO05D003712 6.1e-53 211.5 138 74.6
CSS0003725 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 7.9e-53 211.1 138 74.6
HPP92_000199 Vanilla planifolia HOM05D002471 ORTHO05D003712 1.8e-52 209.9 140 72.9
PSO675G4888 Papaver somniferum HOM05D002471 ORTHO05D003712 3.9e-52 208.8 138 73.9
AagrBONN_evm.TU.Sc2ySwM_228.2821 Anthoceros agrestis HOM05D002471 ORTHO05D003712 8.7e-52 207.6 141 70.2
Aqoxy6G01258 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 3.3e-51 205.7 137 72.3
Pp3c9_10370 Physcomitrium patens HOM05D002471 ORTHO05D003712 5.7e-51 204.9 144 69.4
Pp3c9_10380 Physcomitrium patens HOM05D002471 ORTHO05D003712 5.7e-51 204.9 144 69.4
SEGI_08024 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 5.7e-51 204.9 142 71.8
Pp3c15_7960 Physcomitrium patens HOM05D002471 ORTHO05D003712 4.8e-50 201.8 137 72.3
Mapoly0082s0015 Marchantia polymorpha HOM05D002471 ORTHO05D003712 6.3e-50 201.4 141 70.9
SMO347G0169 Selaginella moellendorffii HOM05D002471 ORTHO05D003712 6.5e-47 191.4 160 61.9
AL7G17290 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 8.5e-47 191.0 140 67.1
Nitab4.5_0001230g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 2.5e-43 179.5 141 66.7
Dinv30011 Davidia involucrata HOM05D002471 ORTHO05D003712 1.4e-38 163.7 169 51.5
Pp3c15_8020 Physcomitrium patens HOM05D002471 ORTHO05D003712 3.0e-36 156.0 137 59.9
CBR_g17730 Chara braunii HOM05D002471 ORTHO05D003712 5.7e-35 151.8 134 53.7
BcaC01g00935 Brassica carinata HOM05D002471 ORTHO05D003712 1.7e-34 150.2 140 57.1
C03p86130 Brassica napus HOM05D002471 ORTHO05D003712 1.7e-34 150.2 140 57.1
BolC3t20901H Brassica oleracea HOM05D002471 ORTHO05D003712 1.7e-34 150.2 140 57.1
Pp3c1_24550 Physcomitrium patens HOM05D002471 ORTHO05D003712 4.8e-34 148.7 165 46.1
BcaC01g00933 Brassica carinata HOM05D002471 ORTHO05D003712 6.3e-34 148.3 141 56.0
C03p86110 Brassica napus HOM05D002471 ORTHO05D003712 6.3e-34 148.3 141 56.0
BolC3t20899H Brassica oleracea HOM05D002471 ORTHO05D003712 6.3e-34 148.3 141 56.0
A03p62600 Brassica napus HOM05D002471 ORTHO05D003712 1.8e-33 146.7 132 59.8
ECA236G4164 Erigeron canadensis HOM05D002471 ORTHO05D003712 3.5e-32 142.5 161 50.9
GSVIVG01022083001 Vitis vinifera HOM05D002471 ORTHO05D003712 5.0e-31 138.7 138 52.2
PRCOL_00003587 Prasinoderma coloniale HOM05D002471 ORTHO05D003712 9.4e-30 134.4 140 46.4
A08p17150 Brassica napus HOM05D002471 ORTHO05D003712 4.0e-28 129.0 157 48.4
BraA08t33676Z Brassica rapa HOM05D002471 ORTHO05D003712 3.3e-27 125.9 144 48.6
PSO541G3046 Papaver somniferum HOM05D002471 ORTHO05D003712 1.7e-23 113.6 167 43.1
PSO541G0156 Papaver somniferum HOM05D002471 ORTHO05D003712 2.2e-23 113.2 136 48.5
PSO675G8350 Papaver somniferum HOM05D002471 ORTHO05D003712 3.2e-22 109.4 165 40.0
PSO541G2248 Papaver somniferum HOM05D002471 ORTHO05D003712 9.4e-22 107.8 154 44.2
PSO675G7634 Papaver somniferum HOM05D002471 ORTHO05D003712 9.4e-22 107.8 140 46.4
PSO675G5225 Papaver somniferum HOM05D002471 ORTHO05D003712 2.7e-21 106.3 132 50.0
BraA03t15330Z Brassica rapa HOM05D002471 ORTHO05D003712 1.8e-20 103.6 98 61.2
Sp7g31810 Schrenkiella parvula HOM05D002471 ORTHO05D003712 3.4e-19 99.4 69 65.2
C07p60160 Brassica napus HOM05D002471 ORTHO05D003712 9.8e-19 97.8 131 43.5
CANSAT01G1155 Cannabis sativa HOM05D002471 ORTHO05D003712 2.4e-17 93.2 135 42.2
BcaNung03360 Brassica carinata HOM05D002471 ORTHO05D003712 2.9e-15 86.3 151 39.1
Thhalv10022448m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 9.4e-14 81.3 70 67.1
Psat5g172600 Pisum sativum HOM05D002471 ORTHO05D017489 1.2e-11 74.3 69 55.1
PSO407G0169 Papaver somniferum HOM05D002471 ORTHO05D017706 9.2e-09 64.7 78 46.2
Cfa022658 Carpinus fangiana HOM05D002471 ORTHO05D003712 1.5e-06 57.4 175 25.7


User provided reference genes

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