Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g89 Utricularia gibba HOM05D000271 ORTHO05D004758 4.9e-123 444.5 226 100.0
unitig_60.g25455 Utricularia gibba HOM05D000271 ORTHO05D004758 6.4e-75 284.6 214 70.1
unitig_744.g24228 Utricularia gibba HOM05D000271 ORTHO05D004758 7.9e-65 251.1 215 60.5
MSTRG.16731 Avicennia marina HOM05D000271 ORTHO05D004758 7.4e-63 244.6 213 59.2
SalBow6G4565 Salvia bowleyana HOM05D000271 ORTHO05D004758 2.6e-60 236.1 212 57.1
MSTRG.20165 Avicennia marina HOM05D000271 ORTHO05D004758 2.9e-59 232.6 211 58.3
Migut.B00362 Erythranthe guttata HOM05D000271 ORTHO05D004758 8.4e-59 231.1 215 57.7
Dinv15729 Davidia involucrata HOM05D000271 ORTHO05D004758 1.8e-56 223.4 214 55.1
MSTRG.27731 Avicennia marina HOM05D000271 ORTHO05D004758 1.5e-55 220.3 213 54.0
CAN.G1041.43 Capsicum annuum HOM05D000271 ORTHO05D004758 4.3e-55 218.8 212 54.2
Solyc01g107980.3 Solanum lycopersicum HOM05D000271 ORTHO05D004758 4.3e-55 218.8 212 54.7
Sopen01g050180 Solanum pennellii HOM05D000271 ORTHO05D004758 4.3e-55 218.8 212 54.2
Nitab4.5_0001428g0070 Nicotiana tabacum HOM05D000271 ORTHO05D004758 9.6e-55 217.6 212 54.7
Oeu044305.1 Olea europaea HOM05D000271 ORTHO05D004758 2.1e-54 216.5 216 53.2
Hma1.2p1_0370F.1_g137660 Hydrangea macrophylla HOM05D000271 ORTHO05D004758 2.8e-54 216.1 214 52.3
Oeu013721.1 Olea europaea HOM05D000271 ORTHO05D004758 2.8e-54 216.1 212 55.2
Peaxi162Scf00016g00202 Petunia axillaris HOM05D000271 ORTHO05D004758 3.7e-54 215.7 215 52.6
PGSC0003DMG400025884 Solanum tuberosum HOM05D000271 ORTHO05D004758 3.7e-54 215.7 212 53.8
Lsat_1_v5_gn_0_4301 Lactuca sativa HOM05D000271 ORTHO05D004758 8.2e-54 214.5 215 51.6
Nitab4.5_0003080g0010 Nicotiana tabacum HOM05D000271 ORTHO05D004758 2.4e-53 213.0 212 54.2
DCAR_022015 Daucus carota HOM05D000271 ORTHO05D004758 9.0e-53 211.1 215 49.3
SGA_v2.0_scaffold90G27623 Striga asiatica HOM05D000271 ORTHO05D004758 1.5e-52 210.3 211 51.7
Hma1.2p1_0474F.1_g160530 Hydrangea macrophylla HOM05D000271 ORTHO05D004758 3.4e-52 209.1 214 50.5
CSS0008597 Camellia sinensis var. sinensis HOM05D000271 ORTHO05D004758 5.8e-52 208.4 214 51.9
Lsat_1_v5_gn_5_112261 Lactuca sativa HOM05D000271 ORTHO05D004758 7.6e-52 208.0 215 51.6
Rhsim11G0164700 Rhododendron simsii HOM05D000271 ORTHO05D004758 7.6e-52 208.0 215 49.8
HanXRQChr10g0301971 Helianthus annuus HOM05D000271 ORTHO05D004758 2.9e-51 206.1 215 53.5
Oeu060982.1 Olea europaea HOM05D000271 ORTHO05D004758 1.9e-50 203.4 216 51.9
PSO210G4990 Papaver somniferum HOM05D000271 ORTHO05D004758 9.3e-50 201.1 229 49.8
arahy.Tifrunner.gnm1.ann1.XY0R0H Arachis hypogaea HOM05D000271 ORTHO05D004758 1.2e-49 200.7 228 49.6
Cc02_g18930 Coffea canephora HOM05D000271 ORTHO05D004758 1.2e-49 200.7 212 50.9
PSO170G6273 Papaver somniferum HOM05D000271 ORTHO05D004758 1.2e-49 200.7 229 49.8
arahy.Tifrunner.gnm1.ann1.KQ5WJ5 Arachis hypogaea HOM05D000271 ORTHO05D004758 1.6e-49 200.3 227 49.3
Peaxi162Scf00152g00012 Petunia axillaris HOM05D000271 ORTHO05D004758 1.6e-49 200.3 214 50.9
ECA236G3599 Erigeron canadensis HOM05D000271 ORTHO05D004758 2.7e-49 199.5 213 48.4
Atru.chr5.2665 Acer truncatum HOM05D000271 ORTHO05D004758 2.3e-48 196.4 213 50.7
CiPaw.05G007900 Carya illinoinensis HOM05D000271 ORTHO05D004758 2.3e-48 196.4 212 49.5
HanXRQChr04g0128151 Helianthus annuus HOM05D000271 ORTHO05D004758 5.7e-47 191.8 215 47.0
QL11p035176 Quercus lobata HOM05D000271 ORTHO05D004758 5.7e-47 191.8 212 49.5
TAR628G1278 Trochodendron aralioides HOM05D000271 ORTHO05D004758 5.7e-47 191.8 228 47.8
MSTRG.5359 Avicennia marina HOM05D000271 ORTHO05D004758 1.3e-46 190.7 222 48.2
CANSAT25G1823 Cannabis sativa HOM05D000271 ORTHO05D004758 1.3e-46 190.7 211 49.8
Duzib132G0157 Durio zibethinus HOM05D000271 ORTHO05D004758 6.3e-46 188.3 211 47.4
Duzib248G0100 Durio zibethinus HOM05D000271 ORTHO05D004758 8.2e-46 188.0 211 48.3
Aqoxy6G01278 Aquilegia oxysepala HOM05D000271 ORTHO05D004758 1.4e-45 187.2 211 49.3
COL.COLO4_32637 Corchorus olitorius HOM05D000271 ORTHO05D004758 1.4e-45 187.2 211 48.3
CSS0011766 Camellia sinensis var. sinensis HOM05D000271 ORTHO05D004758 3.1e-45 186.0 197 50.3
Thecc.02G102700 Theobroma cacao HOM05D000271 ORTHO05D004758 3.1e-45 186.0 211 47.4
Sc08g0001720 Simmondsia chinensis HOM05D000271 ORTHO05D004758 4.1e-45 185.7 218 45.4
TAR381G0434 Trochodendron aralioides HOM05D000271 ORTHO05D004758 4.1e-45 185.7 214 46.7
Cfa004536 Carpinus fangiana HOM05D000271 ORTHO05D004758 5.3e-45 185.3 218 48.2
Lj5P210T46 Lonicera japonica HOM05D000271 ORTHO05D004758 5.3e-45 185.3 214 49.1
Lalb_Chr05g0219271 Lupinus albus HOM05D000271 ORTHO05D004758 5.3e-45 185.3 231 44.6
Potri.009G100200 Populus trichocarpa HOM05D000271 ORTHO05D004758 5.3e-45 185.3 211 49.3
Phvul.003G048200 Phaseolus vulgaris HOM05D000271 ORTHO05D004758 6.9e-45 184.9 227 44.1
TPR.G31591 Trifolium pratense HOM05D000271 ORTHO05D004758 6.9e-45 184.9 213 46.0
Sabra09G0076300 Salix brachista HOM05D000271 ORTHO05D004758 9.0e-45 184.5 211 48.8
Haze_10097 Corylus avellana HOM05D000271 ORTHO05D004758 1.2e-44 184.1 218 47.7
Gorai.013G045000 Gossypium raimondii HOM05D000271 ORTHO05D004758 1.2e-44 184.1 211 46.0
VMungo0251G3086 Vigna mungo HOM05D000271 ORTHO05D004758 1.2e-44 184.1 227 44.5
HanXRQChr16g0514951 Helianthus annuus HOM05D000271 ORTHO05D004758 2.0e-44 183.3 215 48.4
TWI75G0658 Tripterygium wilfordii HOM05D000271 ORTHO05D004758 2.0e-44 183.3 213 48.8
Gohir.A13G041400 Gossypium hirsutum HOM05D000271 ORTHO05D004758 2.6e-44 183.0 211 46.0
Gohir.D13G040100 Gossypium hirsutum HOM05D000271 ORTHO05D004758 2.6e-44 183.0 210 46.2
Prupe.8G127600 Prunus persica HOM05D000271 ORTHO05D004758 2.6e-44 183.0 211 45.5
Ca_18704_v3 Cicer arietinum L. HOM05D000271 ORTHO05D004758 3.4e-44 182.6 210 47.6
Manes.07G072500 Manihot esculenta HOM05D000271 ORTHO05D004758 4.5e-44 182.2 212 45.3
Ciclev10028522m.g Citrus clementina HOM05D000271 ORTHO05D004758 7.7e-44 181.4 214 48.1
Gorai.005G237200 Gossypium raimondii HOM05D000271 ORTHO05D004758 1.0e-43 181.0 211 46.4
Medtr4g085720 Medicago truncatula HOM05D000271 ORTHO05D004758 1.7e-43 180.3 210 45.2
Glyma.02G102900 Glycine max HOM05D000271 ORTHO05D004758 2.2e-43 179.9 209 45.0
Lj4g0023837 Lotus japonicus HOM05D000271 ORTHO05D004758 2.2e-43 179.9 211 45.5
Potri.004G140100 Populus trichocarpa HOM05D000271 ORTHO05D004758 2.9e-43 179.5 210 49.0
Rhsim05G0086300 Rhododendron simsii HOM05D000271 ORTHO05D004758 3.8e-43 179.1 245 45.3
ClCG05G010100 Citrullus lanatus HOM05D000271 ORTHO05D004758 6.5e-43 178.3 218 46.3
Duzib052G0896 Durio zibethinus HOM05D000271 ORTHO05D004758 6.5e-43 178.3 211 46.9
Gohir.A03G188400 Gossypium hirsutum HOM05D000271 ORTHO05D004758 6.5e-43 178.3 211 45.5
Glyma.07G214300 Glycine max HOM05D000271 ORTHO05D004758 8.5e-43 177.9 209 45.0
Gohir.D02G209100 Gossypium hirsutum HOM05D000271 ORTHO05D004758 8.5e-43 177.9 211 46.0
MELO3C019521.2 Cucumis melo HOM05D000271 ORTHO05D004758 1.1e-42 177.6 216 47.2
MD05G1083200 Malus domestica HOM05D000271 ORTHO05D004758 1.4e-42 177.2 211 44.1
SGA_v2.0_scaffold393G50695 Striga asiatica HOM05D000271 ORTHO05D004758 1.4e-42 177.2 216 46.3
Psat7g125600 Pisum sativum HOM05D000271 ORTHO05D004758 2.5e-42 176.4 210 45.2
TAR625G1509 Trochodendron aralioides HOM05D000271 ORTHO05D004758 2.5e-42 176.4 213 46.0
FAN20G2877 Fragaria x ananassa HOM05D000271 ORTHO05D004758 4.2e-42 175.6 211 46.0
Nn5g30343 Nelumbo nucifera HOM05D000271 ORTHO05D004758 5.5e-42 175.3 212 49.5
CsaV3_3G018440 Cucumis sativus L. HOM05D000271 ORTHO05D004758 7.2e-42 174.9 216 47.2
FvH4_2g05820 Fragaria vesca HOM05D000271 ORTHO05D004758 7.2e-42 174.9 211 46.4
FAN24G2353 Fragaria x ananassa HOM05D000271 ORTHO05D004758 7.2e-42 174.9 211 46.4
RcHm_v2.0_Chr6g0257831 Rosa chinensis HOM05D000271 ORTHO05D004758 7.2e-42 174.9 211 46.0
FAN27G1448 Fragaria x ananassa HOM05D000271 ORTHO05D004758 9.4e-42 174.5 211 46.0
AUR62010239 Chenopodium quinoa HOM05D000271 ORTHO05D004758 7.9e-41 171.4 217 46.5
AUR62013222 Chenopodium quinoa HOM05D000271 ORTHO05D004758 2.3e-40 169.9 217 46.1
MBI09_g11543_MAGBIO Magnolia biondii HOM05D000271 ORTHO05D004758 8.8e-40 167.9 215 42.3
SalBow3G3087 Salvia bowleyana HOM05D000271 ORTHO05D004758 2.5e-39 166.4 212 45.3
ECA234G4675 Erigeron canadensis HOM05D000271 ORTHO05D004758 3.3e-39 166.0 217 42.4
Sed0012856 Sechium edule HOM05D000271 ORTHO05D004758 5.7e-39 165.2 217 42.4
CARHR039850 Cardamine hirsuta HOM05D000271 ORTHO05D004758 4.8e-38 162.2 219 45.2
Ah.01g017840 Amaranthus hybridus HOM05D000271 ORTHO05D004758 1.4e-37 160.6 226 41.2
AT1G49780 Arabidopsis thaliana HOM05D000271 ORTHO05D004758 1.4e-37 160.6 215 45.1
THA.LOC104812906 Tarenaya hassleriana HOM05D000271 ORTHO05D004758 1.4e-37 160.6 220 45.0
EL10Ac9g21579 Beta vulgaris HOM05D000271 ORTHO05D004758 1.8e-37 160.2 218 43.1
C08p03940 Brassica napus HOM05D000271 ORTHO05D004758 2.4e-37 159.8 219 44.7
BcaB04g17316 Brassica carinata HOM05D000271 ORTHO05D004758 3.1e-37 159.5 219 44.7
AL1G57240 Arabidopsis lyrata HOM05D000271 ORTHO05D004758 4.1e-37 159.1 215 44.2
A08p03770 Brassica napus HOM05D000271 ORTHO05D004758 4.1e-37 159.1 219 44.3
BraA08t32405Z Brassica rapa HOM05D000271 ORTHO05D004758 4.1e-37 159.1 219 44.3
Aa31LG10G4270 Aethionema arabicum HOM05D000271 ORTHO05D004758 5.3e-37 158.7 216 43.5
Sp3g17440 Schrenkiella parvula HOM05D000271 ORTHO05D004758 6.9e-37 158.3 216 44.9
PGR042G1460 Punica granatum HOM05D000271 ORTHO05D004758 1.5e-36 157.1 216 44.9
BcaC07g37026 Brassica carinata HOM05D000271 ORTHO05D004758 2.6e-36 156.4 219 43.8
BolC8t47187H Brassica oleracea HOM05D000271 ORTHO05D004758 2.6e-36 156.4 219 43.8
Carub.0001s3898 Capsella rubella HOM05D000271 ORTHO05D004758 3.4e-36 156.0 216 44.0
Thhalv10011515m.g Eutrema salsugineum HOM05D000271 ORTHO05D004758 3.4e-36 156.0 216 44.4
CDE08G0542 Ceratophyllum demersum HOM05D000271 ORTHO05D004758 7.7e-36 154.8 229 39.7
Aa31LG8G6130 Aethionema arabicum HOM05D000271 ORTHO05D004758 2.9e-35 152.9 233 41.2
Thhalv10022190m.g Eutrema salsugineum HOM05D000271 ORTHO05D004758 3.8e-35 152.5 216 44.4
Sp1g36680 Schrenkiella parvula HOM05D000271 ORTHO05D004758 6.5e-35 151.8 219 42.9
Sed0018393 Sechium edule HOM05D000271 ORTHO05D004758 1.4e-34 150.6 213 43.2
Carub.0003s1920 Capsella rubella HOM05D000271 ORTHO05D004758 3.2e-34 149.4 215 44.2
AL3G32780 Arabidopsis lyrata HOM05D000271 ORTHO05D004758 5.5e-34 148.7 216 42.6
TWI79G0273 Tripterygium wilfordii HOM05D000271 ORTHO05D004758 5.5e-34 148.7 217 41.0
AT3G19380 Arabidopsis thaliana HOM05D000271 ORTHO05D004758 1.2e-33 147.5 214 42.5
CARHR094780 Cardamine hirsuta HOM05D000271 ORTHO05D004758 1.8e-32 143.7 216 43.1
A01p35280 Brassica napus HOM05D000271 ORTHO05D004758 6.7e-32 141.7 217 43.8
BcaB04g20708 Brassica carinata HOM05D000271 ORTHO05D004758 2.0e-31 140.2 216 43.1
BcaC09g48887 Brassica carinata HOM05D000271 ORTHO05D004758 2.0e-31 140.2 216 43.5
C01p44770 Brassica napus HOM05D000271 ORTHO05D004758 2.0e-31 140.2 216 43.5
BolC1t04443H Brassica oleracea HOM05D000271 ORTHO05D004758 2.0e-31 140.2 216 43.5
BraA01t03608Z Brassica rapa HOM05D000271 ORTHO05D004758 2.6e-31 139.8 216 43.5
BraA05t21862Z Brassica rapa HOM05D000271 ORTHO05D004758 3.3e-31 139.4 217 41.0
BcaC05g28490 Brassica carinata HOM05D000271 ORTHO05D004758 5.7e-31 138.7 217 41.0
C05p45760 Brassica napus HOM05D000271 ORTHO05D004758 5.7e-31 138.7 217 41.0
BolC5t33296H Brassica oleracea HOM05D000271 ORTHO05D004758 5.7e-31 138.7 217 41.0
A05p30240 Brassica napus HOM05D000271 ORTHO05D004758 2.8e-30 136.3 218 41.3
BcaB06g25989 Brassica carinata HOM05D000271 ORTHO05D004758 4.1e-29 132.5 216 41.7
SHI05328 Sapria himalayana HOM05D000271 ORTHO05D004758 6.5e-27 125.2 214 36.4
Nn1g04802 Nelumbo nucifera HOM05D000271 ORTHO05D004758 5.2e-24 115.5 151 47.7
Cpa.g.sc1383.1 Carica papaya HOM05D000271 ORTHO05D004758 2.8e-22 109.8 107 52.3
ATR0584G241 Amborella trichopoda HOM05D000271 ORTHO05D004758 3.1e-21 106.3 219 34.7
Os02g0548700 Oryza sativa ssp. japonica HOM05D000271 ORTHO05D004758 9.1e-21 104.8 216 33.8
HPP92_009258 Vanilla planifolia HOM05D000271 ORTHO05D004758 4.5e-20 102.4 212 33.0
Zm00001eb181840 Zea mays HOM05D000271 ORTHO05D004758 7.2e-18 95.1 214 33.2
GSVIVG01031720001 Vitis vinifera HOM05D000271 ORTHO05D004758 9.4e-18 94.7 123 40.7
Zm00001eb243330 Zea mays HOM05D000271 ORTHO05D004758 1.7e-14 84.0 216 30.6
SEGI_21396 Sequoiadendron giganteum HOM05D000271 ORTHO05D004758 2.8e-14 83.2 245 26.9
AL158U10030 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 2.1e-09 67.0 180 35.6
Mapoly0037s0024 Marchantia polymorpha HOM05D000271 ORTHO05D004758 3.6e-09 66.2 203 27.1
Mapoly0003s0114 Marchantia polymorpha HOM05D000271 ORTHO05D004758 1.0e-08 64.7 219 27.9
CDE06G2139 Ceratophyllum demersum HOM05D000271 ORTHO05D004758 1.8e-08 63.9 79 48.1
HPP92_004391 Vanilla planifolia HOM05D000271 ORTHO05D000742 7.5e-07 58.5 199 28.1
AagrBONN_evm.TU.Sc2ySwM_368.3419 Anthoceros agrestis HOM05D000271 ORTHO05D004758 3.7e-06 56.2 209 25.8
HPP92_009311 Vanilla planifolia HOM05D000271 ORTHO05D000742 6.3e-06 55.5 193 29.0


User provided reference genes

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