Gene: Carub.0001s3898
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s3898
- Transcript Identifier Carub.0001s3898.1
- Gene Type Coding gene
- Location scaffold_1 : 17174596-17175864 : negative
Gene Family Information
- ID HOM05D000271
- #Genes/#Species 1604/95
- Phylogenetic origin
- ID ORTHO05D004758
- #Genes/#Species 172/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s3898.v1.1
- pacid 39229614
- synonym Carubv10011740m.g
Descriptions
- Description PTHR22849//PTHR22849:SF52 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0098542 | ISO | PLAZA Integrative Orthology | defense response to other organism | AT1G49780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT1G49780 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G49780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase |