Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 4.9e-123 444.5 230 100.0
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 7.1e-21 105.1 93 69.9
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 1.2e-20 104.4 86 66.3
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 1.3e-19 100.9 115 55.7
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 1.7e-19 100.5 80 73.8
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.3e-19 100.1 117 47.9
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.9e-19 99.4 73 76.7
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 5.1e-19 99.0 72 73.6
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 6.6e-19 98.6 100 62.0
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 1.1e-18 97.8 74 75.7
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 1.5e-18 97.4 83 60.2
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 2.5e-18 96.7 60 76.7
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 2.5e-18 96.7 60 76.7
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 3.3e-18 96.3 60 75.0
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 3.3e-18 96.3 60 75.0
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 3.3e-18 96.3 60 75.0
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 3.3e-18 96.3 60 75.0
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 4.3e-18 95.9 60 75.0
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 4.3e-18 95.9 60 75.0
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 4.3e-18 95.9 92 65.2
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 4.3e-18 95.9 60 73.3
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.3e-18 95.9 164 42.7
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 5.6e-18 95.5 74 73.0
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 5.6e-18 95.5 96 60.4
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 7.3e-18 95.1 65 67.7
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 7.3e-18 95.1 89 61.8
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 9.6e-18 94.7 60 73.3
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 9.6e-18 94.7 60 73.3
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 9.6e-18 94.7 89 59.6
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 9.6e-18 94.7 92 63.0
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 1.6e-17 94.0 59 74.6
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 1.6e-17 94.0 59 76.3
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 1.6e-17 94.0 59 76.3
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 1.6e-17 94.0 76 68.4
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 2.1e-17 93.6 60 73.3
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 2.8e-17 93.2 74 71.6
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 3.6e-17 92.8 63 69.8
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 4.8e-17 92.4 59 72.9
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 4.8e-17 92.4 58 75.9
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 4.8e-17 92.4 58 75.9
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 4.8e-17 92.4 58 75.9
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 4.8e-17 92.4 59 72.9
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 4.8e-17 92.4 81 64.2
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 4.8e-17 92.4 91 53.8
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 6.2e-17 92.0 73 60.3
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 1.1e-16 91.3 59 71.2
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 1.1e-16 91.3 60 70.0
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 1.1e-16 91.3 74 67.6
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 1.1e-16 91.3 59 71.2
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 1.1e-16 91.3 60 68.3
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 1.4e-16 90.9 74 67.6
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 1.8e-16 90.5 57 75.4
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 1.8e-16 90.5 60 70.0
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 2.4e-16 90.1 59 71.2
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 2.4e-16 90.1 67 64.2
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 2.4e-16 90.1 88 59.1
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 2.4e-16 90.1 60 66.7
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 3.1e-16 89.7 60 66.7
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 3.1e-16 89.7 90 58.9
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 3.1e-16 89.7 60 68.3
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 3.1e-16 89.7 74 66.2
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 3.1e-16 89.7 108 48.1
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 4.0e-16 89.4 60 66.7
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 5.3e-16 89.0 61 68.9
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 5.3e-16 89.0 60 68.3
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 6.9e-16 88.6 60 66.7
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 6.9e-16 88.6 63 65.1
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 9.0e-16 88.2 90 56.7
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.2e-15 87.8 60 65.0
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 1.2e-15 87.8 58 65.5
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 1.5e-15 87.4 107 51.4
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.5e-15 87.4 59 66.1
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 1.5e-15 87.4 60 66.7
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.0e-15 87.0 74 66.2
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.0e-15 87.0 74 66.2
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.6e-15 86.7 94 54.3
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 2.6e-15 86.7 120 47.5
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.6e-15 86.7 74 64.9
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 4.5e-15 85.9 60 65.0
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 7.6e-15 85.1 79 59.5
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 9.9e-15 84.7 66 65.2
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 1.3e-14 84.3 102 49.0
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 2.9e-14 83.2 90 58.9
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 4.9e-14 82.4 59 66.1
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 8.4e-14 81.6 57 61.4
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 8.4e-14 81.6 131 43.5
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 1.1e-13 81.3 165 41.8
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 7.1e-13 78.6 73 54.8
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 1.8e-11 73.9 59 57.6
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 3.9e-11 72.8 46 76.1
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 3.9e-11 72.8 42 83.3
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 6.7e-11 72.0 77 50.6
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 8.7e-11 71.6 43 79.1
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 3.3e-10 69.7 78 59.0
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 1.3e-09 67.8 75 58.7
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 1.3e-09 67.8 83 51.8
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 1.3e-09 67.8 83 51.8
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 2.8e-09 66.6 75 57.3
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 2.8e-09 66.6 83 42.2
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 2.8e-09 66.6 77 45.5
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 3.7e-09 66.2 85 44.7
Haze_10292 Corylus avellana HOM05D004087 ORTHO05D004787 3.7e-09 66.2 66 48.5
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 4.8e-09 65.9 81 43.2
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 4.8e-09 65.9 80 43.8
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 4.8e-09 65.9 60 50.0
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 6.2e-09 65.5 60 55.0
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 8.1e-09 65.1 60 50.0
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 8.1e-09 65.1 60 51.7
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 8.1e-09 65.1 60 51.7
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 8.1e-09 65.1 60 50.0
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 1.1e-08 64.7 118 41.5
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 1.1e-08 64.7 85 42.4
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 1.4e-08 64.3 60 51.7
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 1.4e-08 64.3 60 51.7
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 1.4e-08 64.3 110 35.5
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 1.8e-08 63.9 60 53.3
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 1.8e-08 63.9 60 50.0
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 1.8e-08 63.9 60 48.3
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 1.8e-08 63.9 81 40.7
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 2.4e-08 63.5 56 53.6
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 3.1e-08 63.2 61 54.1
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 3.1e-08 63.2 53 50.9
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 4.0e-08 62.8 66 47.0
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 4.0e-08 62.8 60 48.3
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 4.0e-08 62.8 60 48.3
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 4.0e-08 62.8 77 45.5
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 5.3e-08 62.4 60 50.0
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 5.3e-08 62.4 142 33.8
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 6.9e-08 62.0 60 50.0
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 6.9e-08 62.0 60 48.3
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 6.9e-08 62.0 60 53.3
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 6.9e-08 62.0 73 43.8
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.2e-07 61.2 60 48.3
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 1.2e-07 61.2 124 33.9
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 1.2e-07 61.2 124 33.9
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 1.5e-07 60.8 60 48.3
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 1.5e-07 60.8 60 45.0
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 2.0e-07 60.5 75 50.7
Lj5A221T58 Lonicera japonica HOM05D004087 ORTHO05D004787 2.0e-07 60.5 69 58.0
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 2.0e-07 60.5 112 45.5
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 3.4e-07 59.7 60 46.7
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 3.4e-07 59.7 57 54.4
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 3.4e-07 59.7 57 54.4
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 3.4e-07 59.7 106 44.3
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 5.8e-07 58.9 60 48.3
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.0e-06 58.2 60 46.7
Lsat_1_v5_gn_3_112521 Lactuca sativa HOM05D004087 ORTHO05D004787 1.3e-06 57.8 89 48.3
Lsat_1_v5_gn_9_118200 Lactuca sativa HOM05D004087 ORTHO05D004787 2.9e-06 56.6 89 48.3
Cpa.g.sc106.30 Carica papaya HOM05D004087 ORTHO05D004787 3.8e-06 56.2 75 52.0


User provided reference genes

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