Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g510 Utricularia gibba HOM05D004807 ORTHO05D005915 8.1e-143 510.4 254 100.0
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 5.5e-99 364.8 263 68.4
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 8.8e-97 357.5 264 65.9
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 5.9e-93 344.7 265 65.3
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 5.9e-93 344.7 277 63.5
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 2.9e-92 342.4 277 62.1
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 1.9e-91 339.7 278 61.9
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 5.5e-91 338.2 277 62.1
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 9.4e-91 337.4 276 62.0
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 3.6e-90 335.5 277 59.9
Ciclev10011630m.g Citrus clementina HOM05D004807 ORTHO05D005915 3.6e-90 335.5 277 61.4
Actinidia22072 Actinidia chinensis HOM05D004807 ORTHO05D005915 8.8e-89 330.9 277 60.3
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 8.8e-89 330.9 275 59.6
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 2.6e-88 329.3 274 60.2
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 4.4e-88 328.6 277 60.3
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 5.7e-88 328.2 277 58.8
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 9.7e-88 327.4 277 59.6
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 1.7e-87 326.6 275 58.9
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 1.4e-86 323.6 277 58.8
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 3.1e-86 322.4 275 58.9
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 4.1e-86 322.0 273 59.0
Actinidia01589 Actinidia chinensis HOM05D004807 ORTHO05D005915 5.3e-86 321.6 275 58.9
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 3.5e-85 318.9 265 61.9
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.5e-85 318.5 275 58.9
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 4.5e-85 318.5 293 57.3
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 2.2e-84 316.2 277 58.1
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 2.2e-84 316.2 275 58.5
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 5.0e-84 315.1 275 56.7
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 6.5e-84 314.7 277 57.8
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.1e-83 313.9 275 56.7
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.2e-83 312.4 274 58.0
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.2e-83 312.4 274 58.0
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 5.5e-83 311.6 276 57.2
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 7.2e-83 311.2 277 57.4
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 7.2e-83 311.2 278 58.3
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 7.2e-83 311.2 275 56.7
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 2.1e-82 309.7 298 56.4
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 2.1e-82 309.7 277 56.0
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 2.1e-82 309.7 277 56.7
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 2.1e-82 309.7 274 58.4
Cpa.g.sc85.18 Carica papaya HOM05D004807 ORTHO05D005915 2.7e-82 309.3 278 57.6
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 2.7e-82 309.3 277 57.0
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 2.7e-82 309.3 277 56.0
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 2.7e-82 309.3 277 56.0
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 4.7e-82 308.5 274 56.6
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 1.0e-81 307.4 276 55.4
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 1.0e-81 307.4 277 57.4
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 1.0e-81 307.4 274 56.6
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 1.4e-81 307.0 274 55.5
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 3.0e-81 305.8 277 57.0
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 3.0e-81 305.8 277 57.0
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 5.2e-81 305.1 271 55.4
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 6.7e-81 304.7 271 55.4
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 8.8e-81 304.3 269 55.4
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 8.8e-81 304.3 280 55.4
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 1.1e-80 303.9 269 55.4
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 1.5e-80 303.5 274 54.0
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 1.5e-80 303.5 271 55.0
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 1.5e-80 303.5 277 56.7
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 2.0e-80 303.1 280 56.4
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 2.6e-80 302.8 277 56.0
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 3.3e-80 302.4 276 54.7
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 4.4e-80 302.0 276 54.7
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 7.5e-80 301.2 277 56.0
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 9.7e-80 300.8 274 54.4
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 9.7e-80 300.8 270 55.2
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 9.7e-80 300.8 279 54.1
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 9.7e-80 300.8 276 54.3
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 1.7e-79 300.1 276 54.0
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 1.7e-79 300.1 276 54.0
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 1.7e-79 300.1 276 54.0
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 1.7e-79 300.1 276 54.0
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 2.8e-79 299.3 277 54.5
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 2.8e-79 299.3 281 54.8
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 4.8e-79 298.5 267 57.3
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 8.2e-79 297.7 277 55.2
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 1.1e-78 297.4 276 53.6
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.1e-78 297.4 277 55.2
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 2.4e-78 296.2 277 56.3
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 2.4e-78 296.2 276 56.2
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 4.1e-78 295.4 279 54.1
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 7.0e-78 294.7 277 54.2
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.2e-77 293.9 277 54.2
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 1.6e-77 293.5 275 56.4
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 2.0e-77 293.1 277 55.2
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 4.5e-77 292.0 276 52.5
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 1.3e-76 290.4 274 52.2
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 1.7e-76 290.0 277 54.2
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 3.8e-76 288.9 274 52.2
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 1.1e-75 287.3 277 54.2
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 4.7e-74 282.0 275 53.5
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 1.8e-73 280.0 261 54.8
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 5.2e-73 278.5 261 55.2
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.3e-71 273.9 274 51.8
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 3.7e-71 272.3 271 52.8
Lsat_1_v5_gn_3_12560 Lactuca sativa HOM05D004807 ORTHO05D005915 8.3e-71 271.2 261 52.5
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 8.3e-71 271.2 281 53.0
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 2.9e-68 262.7 282 52.1
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 3.8e-68 262.3 265 49.8
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 3.2e-67 259.2 269 50.6
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 8.8e-65 251.1 264 51.1
Dinv25022 Davidia involucrata HOM05D004807 ORTHO05D005915 2.8e-63 246.1 245 52.7
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 3.7e-63 245.7 279 48.0
RhsimUnG0014500 Rhododendron simsii HOM05D004807 ORTHO05D005915 9.5e-59 231.1 143 74.1
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.6e-58 230.3 277 48.0
HPP92_017552 Vanilla planifolia HOM05D004807 ORTHO05D005915 2.1e-58 229.9 273 44.7
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 3.6e-58 229.2 249 47.4
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 6.4e-55 218.4 276 44.2
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 2.7e-53 213.0 277 43.0
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 1.7e-52 210.3 277 45.1
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 1.4e-49 200.7 263 41.8
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 2.0e-48 196.8 267 42.7
AagrBONN_evm.TU.Sc2ySwM_228.687 Anthoceros agrestis HOM05D004807 ORTHO05D005915 6.0e-45 185.3 244 39.8
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.7e-44 183.7 257 42.4
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 3.5e-37 159.5 251 38.2
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-25 118.2 160 38.1
Lsat_1_v5_gn_6_720 Lactuca sativa HOM05D004807 ORTHO05D005915 3.2e-22 109.8 70 74.3
Cfa020119 Carpinus fangiana HOM05D004807 ORTHO05D021976 6.6e-20 102.1 64 71.9
Haze_20076 Corylus avellana HOM05D004807 ORTHO05D005915 9.6e-19 98.2 69 71.0
AagrBONN_evm.TU.Sc2ySwM_228.684 Anthoceros agrestis HOM05D004807 ORTHO05D005915 2.6e-08 63.5 59 47.5


User provided reference genes

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