Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2831 Utricularia gibba HOM05D003762 ORTHO05D004374 8.6e-196 686.8 348 100.0
Oeu056611.1 Olea europaea HOM05D003762 ORTHO05D004374 2.1e-48 197.2 223 45.3
MSTRG.11877 Avicennia marina HOM05D003762 ORTHO05D004374 1.8e-47 194.1 221 46.2
Migut.J01128 Erythranthe guttata HOM05D003762 ORTHO05D004374 2.5e-46 190.3 222 44.1
Peaxi162Scf00053g00522 Petunia axillaris HOM05D003762 ORTHO05D004374 4.8e-45 186.0 235 40.9
SalBow2G2359 Salvia bowleyana HOM05D003762 ORTHO05D004374 4.8e-45 186.0 236 42.4
CAN.G812.32 Capsicum annuum HOM05D003762 ORTHO05D004374 3.1e-44 183.3 220 43.2
Nitab4.5_0000255g0050 Nicotiana tabacum HOM05D003762 ORTHO05D004374 4.1e-44 183.0 220 44.5
SGA_v2.0_scaffold146G36137 Striga asiatica HOM05D003762 ORTHO05D004374 2.0e-43 180.6 220 42.3
Cc08_g05300 Coffea canephora HOM05D003762 ORTHO05D004374 2.6e-43 180.3 223 43.5
Nitab4.5_0000898g0100 Nicotiana tabacum HOM05D003762 ORTHO05D004374 2.6e-43 180.3 220 44.1
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 7.6e-43 178.7 238 39.9
SGA_v2.0_scaffold120G32921 Striga asiatica HOM05D003762 ORTHO05D004374 7.6e-43 178.7 220 41.4
Hma1.2p1_0515F.1_g170140 Hydrangea macrophylla HOM05D003762 ORTHO05D004374 1.0e-42 178.3 234 41.5
DCAR_002196 Daucus carota HOM05D003762 ORTHO05D004374 1.3e-42 177.9 218 44.0
Sopen08g024260 Solanum pennellii HOM05D003762 ORTHO05D004374 6.5e-42 175.6 228 39.5
vmacro11452 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 1.1e-41 174.9 210 44.3
GSVIVG01004444001 Vitis vinifera HOM05D003762 ORTHO05D004374 1.1e-41 174.9 222 42.8
Dinv08128 Davidia involucrata HOM05D003762 ORTHO05D004374 3.2e-41 173.3 214 42.1
PGSC0003DMG402007612 Solanum tuberosum HOM05D003762 ORTHO05D004374 9.3e-41 171.8 228 39.5
PGSC0003DMG400003846 Solanum tuberosum HOM05D003762 ORTHO05D004374 1.6e-40 171.0 221 41.6
CSS0030442 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 7.9e-40 168.7 217 42.4
ECA246G1447 Erigeron canadensis HOM05D000759 ORTHO05D000574 1.0e-39 168.3 222 41.0
CSS0038493 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 1.3e-39 167.9 217 42.9
DCAR_030901 Daucus carota HOM05D003762 ORTHO05D004374 1.3e-39 167.9 219 42.0
Actinidia15994 Actinidia chinensis HOM05D003762 ORTHO05D004374 2.3e-39 167.2 218 42.2
Cpa.g.sc37.21 Carica papaya HOM05D003762 ORTHO05D004374 1.1e-38 164.9 219 39.7
Lsat_1_v5_gn_3_23460 Lactuca sativa HOM05D003762 ORTHO05D004374 1.1e-38 164.9 214 41.1
Lj8P331T26 Lonicera japonica HOM05D003762 ORTHO05D004374 1.5e-38 164.5 205 44.9
CiPaw.09G152500 Carya illinoinensis HOM05D003762 ORTHO05D004374 2.5e-38 163.7 218 38.5
COL.COLO4_12944 Corchorus olitorius HOM05D003762 ORTHO05D004374 2.5e-38 163.7 231 39.0
Glyma.18G279200 Glycine max HOM05D003762 ORTHO05D004374 2.5e-38 163.7 218 39.0
Phvul.008G021700 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 2.5e-38 163.7 223 39.0
GSVIVG01017309001 Vitis vinifera HOM05D003762 ORTHO05D004374 3.3e-38 163.3 237 40.1
Atru.chr1.3040 Acer truncatum HOM05D003762 ORTHO05D004374 7.4e-38 162.2 218 38.5
Rhsim11G0183700 Rhododendron simsii HOM05D003762 ORTHO05D004374 7.4e-38 162.2 205 42.4
arahy.Tifrunner.gnm1.ann1.VKA3KK Arachis hypogaea HOM05D003762 ORTHO05D004374 1.3e-37 161.4 223 38.1
Sabra01G0002500 Salix brachista HOM05D003762 ORTHO05D004374 1.3e-37 161.4 297 34.0
Nn1g05222 Nelumbo nucifera HOM05D003762 ORTHO05D004374 2.8e-37 160.2 217 39.2
Potri.003G033600 Populus trichocarpa HOM05D003762 ORTHO05D004374 2.8e-37 160.2 220 39.5
TWI36G0443 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 2.8e-37 160.2 210 39.0
arahy.Tifrunner.gnm1.ann1.IN3X4V Arachis hypogaea HOM05D003762 ORTHO05D004374 4.8e-37 159.5 223 37.7
TWI56G0980 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 4.8e-37 159.5 210 40.5
Potri.001G003700 Populus trichocarpa HOM05D003762 ORTHO05D004374 6.3e-37 159.1 218 39.9
QL01p011549 Quercus lobata HOM05D003762 ORTHO05D004374 6.3e-37 159.1 237 35.4
ClCG02G018290 Citrullus lanatus HOM05D003762 ORTHO05D004374 8.2e-37 158.7 212 42.0
VMungo1383G0008 Vigna mungo HOM05D003762 ORTHO05D004374 1.1e-36 158.3 223 36.8
Ciclev10026399m.g Citrus clementina HOM05D003762 ORTHO05D004374 1.4e-36 157.9 224 38.8
Cfa001979 Carpinus fangiana HOM05D003762 ORTHO05D004374 2.4e-36 157.1 222 37.4
Potri.018G000800 Populus trichocarpa HOM05D003762 ORTHO05D004374 3.1e-36 156.8 220 38.6
Aa31LG11G3050 Aethionema arabicum HOM05D003762 ORTHO05D004374 4.1e-36 156.4 213 38.5
ECA240G1229 Erigeron canadensis HOM05D003762 ORTHO05D004374 4.1e-36 156.4 223 37.7
Manes.04G114300 Manihot esculenta HOM05D003762 ORTHO05D004374 6.9e-36 155.6 238 36.1
Duzib160G0900 Durio zibethinus HOM05D003762 ORTHO05D004374 9.0e-36 155.2 225 37.8
HanXRQChr17g0537091 Helianthus annuus HOM05D003762 ORTHO05D004374 9.0e-36 155.2 194 40.7
Zm00001eb386260 Zea mays HOM05D003762 ORTHO05D004374 9.0e-36 155.2 226 39.4
Aa31sc38G110 Aethionema arabicum HOM05D003762 ORTHO05D004374 1.2e-35 154.8 212 37.3
Ca_06841_v3 Cicer arietinum L. HOM05D003762 ORTHO05D004374 1.2e-35 154.8 225 36.0
Sed0021000 Sechium edule HOM05D003762 ORTHO05D004374 1.2e-35 154.8 215 40.9
Glyma.07G041800 Glycine max HOM05D003762 ORTHO05D004374 1.5e-35 154.5 231 37.7
HanXRQChr03g0081311 Helianthus annuus HOM05D003762 ORTHO05D004374 1.5e-35 154.5 221 40.3
arahy.Tifrunner.gnm1.ann1.RFRX47 Arachis hypogaea HOM05D003762 ORTHO05D004374 2.0e-35 154.1 223 37.2
MELO3C014058.2 Cucumis melo HOM05D003762 ORTHO05D004374 2.0e-35 154.1 214 39.3
PSO170G1737 Papaver somniferum HOM05D003762 ORTHO05D004374 2.6e-35 153.7 228 37.3
arahy.Tifrunner.gnm1.ann1.1PQR27 Arachis hypogaea HOM05D003762 ORTHO05D004374 3.4e-35 153.3 223 37.7
AT5G23710 Arabidopsis thaliana HOM05D003762 ORTHO05D004374 4.5e-35 152.9 214 37.9
CsaV3_3G003760 Cucumis sativus L. HOM05D003762 ORTHO05D004374 4.5e-35 152.9 214 39.3
Thecc.06G021200 Theobroma cacao HOM05D003762 ORTHO05D004374 4.5e-35 152.9 225 37.8
Sed0000714 Sechium edule HOM05D003762 ORTHO05D004374 7.7e-35 152.1 213 39.0
arahy.Tifrunner.gnm1.ann1.3GPH34 Arachis hypogaea HOM05D003762 ORTHO05D004374 1.0e-34 151.8 225 38.2
Peaxi162Scf00573g00044 Petunia axillaris HOM05D003762 ORTHO05D004374 1.0e-34 151.8 221 38.0
Sp2g23520 Schrenkiella parvula HOM05D003762 ORTHO05D004374 1.3e-34 151.4 215 37.2
Solyc08g075580.3 Solanum lycopersicum HOM05D003762 ORTHO05D004374 1.3e-34 151.4 156 46.8
Lalb_Chr17g0343451 Lupinus albus HOM05D003762 ORTHO05D004374 1.7e-34 151.0 239 36.0
MD15G1431400 Malus domestica HOM05D003762 ORTHO05D004374 1.7e-34 151.0 199 39.2
Psat4g001640 Pisum sativum HOM05D003762 ORTHO05D004374 1.7e-34 151.0 217 36.4
Oeu056610.1 Olea europaea HOM05D003762 ORTHO05D004374 2.9e-34 150.2 148 48.6
Gohir.A02G058000 Gossypium hirsutum HOM05D003762 ORTHO05D004374 3.8e-34 149.8 213 38.0
Prupe.5G067300 Prunus persica HOM05D003762 ORTHO05D004374 3.8e-34 149.8 218 38.5
Hund13161 Selenicereus undatus HOM05D003762 ORTHO05D004374 3.8e-34 149.8 241 34.0
A06p34610 Brassica napus HOM05D003762 ORTHO05D004374 5.0e-34 149.4 215 38.1
BraA06t26389Z Brassica rapa HOM05D003762 ORTHO05D004374 5.0e-34 149.4 215 38.1
ClCG00G001180 Citrullus lanatus HOM05D003762 ORTHO05D004374 5.0e-34 149.4 214 37.9
ClCG10G003800 Citrullus lanatus HOM05D003762 ORTHO05D004374 5.0e-34 149.4 214 37.9
Thhalv10005351m.g Eutrema salsugineum HOM05D003762 ORTHO05D004374 5.0e-34 149.4 214 37.9
AL6G34980 Arabidopsis lyrata HOM05D003762 ORTHO05D004374 8.5e-34 148.7 214 37.4
BolC9t53671H Brassica oleracea HOM05D003762 ORTHO05D004374 8.5e-34 148.7 215 39.5
Gorai.005G071700 Gossypium raimondii HOM05D003762 ORTHO05D004374 1.1e-33 148.3 213 37.1
Phvul.010G127200 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 1.4e-33 147.9 222 35.6
Zm00001eb276730 Zea mays HOM05D003762 ORTHO05D004374 1.4e-33 147.9 216 38.9
Aqoxy6G02090 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 1.9e-33 147.5 218 38.5
BcaC04g23509 Brassica carinata HOM05D003762 ORTHO05D004374 1.9e-33 147.5 216 38.4
BraA09t36329Z Brassica rapa HOM05D003762 ORTHO05D004374 1.9e-33 147.5 221 38.5
MBI14_g44482_MAGBIO Magnolia biondii HOM05D003762 ORTHO05D004374 1.9e-33 147.5 215 39.1
Aqoxy6G01949 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 2.5e-33 147.1 221 38.5
Prupe.1G576300 Prunus persica HOM05D003762 ORTHO05D004374 3.2e-33 146.7 218 38.5
Eucgr.J01004 Eucalyptus grandis HOM05D003762 ORTHO05D004374 5.5e-33 146.0 208 37.5
TPR.G19896 Trifolium pratense HOM05D003762 ORTHO05D004374 5.5e-33 146.0 225 34.7
Gohir.D02G063800 Gossypium hirsutum HOM05D003762 ORTHO05D004374 7.2e-33 145.6 213 36.6
Sc24g0003260 Simmondsia chinensis HOM05D003762 ORTHO05D004374 7.2e-33 145.6 219 38.4
CANSAT35G0296 Cannabis sativa HOM05D003762 ORTHO05D004374 1.2e-32 144.8 218 37.2
Carub.0006s2146 Capsella rubella HOM05D003762 ORTHO05D004374 1.6e-32 144.4 212 35.8
BcaNung01845 Brassica carinata HOM05D003762 ORTHO05D004374 2.7e-32 143.7 215 37.2
C07p43880 Brassica napus HOM05D003762 ORTHO05D004374 2.7e-32 143.7 215 37.2
BolC7t44916H Brassica oleracea HOM05D003762 ORTHO05D004374 2.7e-32 143.7 215 37.2
Glyma.09G089900 Glycine max HOM05D003762 ORTHO05D004374 3.6e-32 143.3 217 39.2
THA.LOC104798921 Tarenaya hassleriana HOM05D003762 ORTHO05D004374 4.6e-32 142.9 214 37.9
C09p07550 Brassica napus HOM05D003762 ORTHO05D004374 1.0e-31 141.7 216 38.0
Eucgr.F01771 Eucalyptus grandis HOM05D003762 ORTHO05D004374 1.0e-31 141.7 220 34.1
Lj1g0002607 Lotus japonicus HOM05D003762 ORTHO05D004374 1.0e-31 141.7 224 37.9
CARHR189840 Cardamine hirsuta HOM05D003762 ORTHO05D004374 1.8e-31 141.0 212 36.8
AUR62024643 Chenopodium quinoa HOM05D003762 ORTHO05D004374 1.8e-31 141.0 218 37.2
FAN05G3809 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.0e-31 140.2 218 34.4
FAN14G5252 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.0e-31 140.2 218 34.4
FAN09G0714 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.9e-31 139.8 218 34.4
FvH4_6g29950 Fragaria vesca HOM05D003762 ORTHO05D004374 6.7e-31 139.0 218 34.4
FAN02G0052 Fragaria x ananassa HOM05D003762 ORTHO05D004374 6.7e-31 139.0 218 34.4
PGR044G0538 Punica granatum HOM05D003762 ORTHO05D004374 1.1e-30 138.3 221 37.1
A09p06830 Brassica napus HOM05D003762 ORTHO05D004374 2.0e-30 137.5 221 36.7
Ah.03g133930 Amaranthus hybridus HOM05D003762 ORTHO05D004374 3.3e-30 136.7 226 34.5
QL03p059502 Quercus lobata HOM05D003762 ORTHO05D004374 3.3e-30 136.7 215 39.1
Atru.chr1.3022 Acer truncatum HOM05D003762 ORTHO05D004374 5.7e-30 136.0 153 43.1
BcaB04g19852 Brassica carinata HOM05D003762 ORTHO05D004374 1.3e-29 134.8 216 38.4
BcaB04g19853 Brassica carinata HOM05D003762 ORTHO05D004374 1.3e-29 134.8 216 38.4
vmacro16904 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 1.7e-29 134.4 168 44.0
Medtr7g109780 Medicago truncatula HOM05D003762 ORTHO05D004374 1.1e-28 131.7 193 36.8
TAR636G2311 Trochodendron aralioides HOM05D003762 ORTHO05D004374 1.1e-28 131.7 153 45.8
PSO455G0078 Papaver somniferum HOM05D003762 ORTHO05D004374 5.3e-28 129.4 226 33.6
HPP92_015034 Vanilla planifolia HOM05D003762 ORTHO05D004374 9.1e-28 128.6 204 38.2
CAN.G1683.1 Capsicum annuum HOM05D003762 ORTHO05D004374 1.5e-27 127.9 188 37.2
CAN.G2872.1 Capsicum annuum HOM05D003762 ORTHO05D004374 2.6e-27 127.1 188 37.2
TAR625G0731 Trochodendron aralioides HOM05D003762 ORTHO05D004374 3.4e-27 126.7 245 33.9
TPR.G20064 Trifolium pratense HOM05D003762 ORTHO05D004374 4.5e-27 126.3 225 32.9
Rhsim12G0192200 Rhododendron simsii HOM05D003762 ORTHO05D004374 7.7e-27 125.6 137 42.3
RcHm_v2.0_Chr6g0271261 Rosa chinensis HOM05D003762 ORTHO05D004374 3.8e-26 123.2 218 32.6
RcHm_v2.0_Chr6g0271271 Rosa chinensis HOM05D003762 ORTHO05D004374 5.0e-26 122.9 218 32.6
Medtr0003s0690 Medicago truncatula HOM05D003762 ORTHO05D004374 2.5e-25 120.6 178 35.4
RcHm_v2.0_Chr2g0135951 Rosa chinensis HOM05D003762 ORTHO05D004374 2.5e-25 120.6 218 32.1
HPP92_015113 Vanilla planifolia HOM05D003762 ORTHO05D004374 7.2e-25 119.0 155 43.2
Zm00001eb356740 Zea mays HOM05D003762 ORTHO05D004374 1.6e-24 117.9 184 38.0
AagrBONN_evm.TU.Sc2ySwM_228.1250 Anthoceros agrestis HOM05D003762 ORTHO05D004374 2.7e-24 117.1 218 33.0
ATR0580G255 Amborella trichopoda HOM05D003762 ORTHO05D004374 3.0e-23 113.6 217 32.3
Haze_16536 Corylus avellana HOM05D003762 ORTHO05D004374 3.3e-22 110.2 195 32.8
VMungo0331G0552 Vigna mungo HOM05D003762 ORTHO05D004374 7.4e-22 109.0 224 29.9
Ciclev10009494m.g Citrus clementina HOM05D003762 ORTHO05D004374 9.7e-22 108.6 221 30.3
Mapoly0090s0008 Marchantia polymorpha HOM05D003762 ORTHO05D004374 2.2e-21 107.5 216 30.1
FAN09G1243 Fragaria x ananassa HOM05D003762 ORTHO05D004374 2.8e-21 107.1 218 31.2
Lsat_1_v5_gn_3_23440 Lactuca sativa HOM05D003762 ORTHO05D004374 2.0e-19 100.9 168 34.5
PSO455G0143 Papaver somniferum HOM05D003762 ORTHO05D004374 2.0e-19 100.9 226 33.2
VMungo0720G1683 Vigna mungo HOM05D003762 ORTHO05D004374 3.5e-19 100.1 140 37.1
MCO15G473 Micromonas commoda HOM05D003762 ORTHO05D004374 7.7e-19 99.0 232 31.9
Oeu039594.1 Olea europaea HOM05D003762 ORTHO05D004374 1.0e-18 98.6 152 36.2
Nitab4.5_0009310g0060 Nicotiana tabacum HOM05D003762 ORTHO05D004374 3.8e-18 96.7 104 47.1
MELO3C007348.2 Cucumis melo HOM05D003762 ORTHO05D004374 1.5e-17 94.7 164 32.9
Cre07.g314950 Chlamydomonas reinhardtii HOM05D003762 ORTHO05D004374 5.5e-17 92.8 230 30.0
Pp3c22_6800 Physcomitrium patens HOM05D003762 ORTHO05D004374 5.5e-17 92.8 216 27.3
MD08G1239800 Malus domestica HOM05D003762 ORTHO05D004374 1.2e-16 91.7 116 38.8
HanXRQChr03g0081131 Helianthus annuus HOM05D003762 ORTHO05D004374 6.7e-15 85.9 75 54.7
QL06p036898 Quercus lobata HOM05D003762 ORTHO05D004374 1.2e-14 85.1 122 36.1
FAN02G2701 Fragaria x ananassa HOM05D003762 ORTHO05D004374 4.8e-13 79.7 204 27.5
Os06g0603400 Oryza sativa ssp. japonica HOM05D003762 ORTHO05D004374 1.0e-10 72.0 63 55.6
vmacro18986 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 2.9e-10 70.5 103 39.8
Nn1g05046 Nelumbo nucifera HOM05D002280 ORTHO05D002322 3.2e-09 67.0 72 41.7
Aqoxy6G01956 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 7.2e-09 65.9 92 39.1
PSO384G2135 Papaver somniferum HOM05D003762 ORTHO05D004374 1.6e-08 64.7 99 35.4
PSO384G3622 Papaver somniferum HOM05D003762 ORTHO05D004374 1.6e-08 64.7 99 35.4
SEGI_04069 Sequoiadendron giganteum HOM05D003762 ORTHO05D004374 2.7e-08 63.9 77 39.0
FAN14G0588 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.6e-08 63.5 115 30.4
FAN05G0849 Fragaria x ananassa HOM05D003762 ORTHO05D004374 8.0e-08 62.4 149 26.2
FvH4_6g41460 Fragaria vesca HOM05D003762 ORTHO05D004374 1.4e-07 61.6 111 31.5
QL05p029016 Quercus lobata HOM05D003762 ORTHO05D004374 4.4e-06 56.6 88 35.2


User provided reference genes

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