Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2721 Utricularia gibba HOM05D000527 ORTHO05D000559 4.4e-65 251.1 126 100.0
unitig_748.g7165 Utricularia gibba HOM05D000527 ORTHO05D000559 1.6e-27 126.3 108 62.0
Cc06_g08070 Coffea canephora HOM05D000527 ORTHO05D000559 7.9e-14 80.9 68 60.3
Migut.K00425 Erythranthe guttata HOM05D000527 ORTHO05D000559 2.3e-13 79.3 102 52.0
SalBow1G6103 Salvia bowleyana HOM05D000527 ORTHO05D000559 3.0e-13 79.0 119 47.9
Nitab4.5_0002008g0050 Nicotiana tabacum HOM05D000527 ORTHO05D000559 1.3e-11 73.6 74 55.4
Nitab4.5_0005465g0030 Nicotiana tabacum HOM05D000527 ORTHO05D000559 1.3e-11 73.6 88 50.0
Actinidia21953 Actinidia chinensis HOM05D000527 ORTHO05D000559 2.1e-11 72.8 82 50.0
vmacro07720 Vaccinium macrocarpon HOM05D000527 ORTHO05D000559 2.1e-11 72.8 48 70.8
PGR102G0131 Punica granatum HOM05D000527 ORTHO05D000559 1.1e-10 70.5 86 50.0
Hund26537 Selenicereus undatus HOM05D000527 ORTHO05D000559 1.1e-10 70.5 62 59.7
CSS0001300 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 3.1e-10 68.9 73 50.7
Peaxi162Scf00088g01328 Petunia axillaris HOM05D000527 ORTHO05D000559 3.1e-10 68.9 44 70.5
EL10Ac8g18719 Beta vulgaris HOM05D000527 ORTHO05D000559 4.0e-10 68.6 78 52.6
Gorai.004G107400 Gossypium raimondii HOM05D000527 ORTHO05D000559 4.0e-10 68.6 72 51.4
Dinv36479 Davidia involucrata HOM05D000527 ORTHO05D000559 5.3e-10 68.2 44 70.5
Rhsim01G0061700 Rhododendron simsii HOM05D000527 ORTHO05D000559 6.9e-10 67.8 44 72.7
Gohir.A08G088562 Gossypium hirsutum HOM05D000527 ORTHO05D000559 9.0e-10 67.4 72 50.0
Sed0021184 Sechium edule HOM05D000527 ORTHO05D000559 9.0e-10 67.4 44 72.7
Duzib150G0955 Durio zibethinus HOM05D000527 ORTHO05D000559 1.2e-09 67.0 70 50.0
MD02G1025500 Malus domestica HOM05D000527 ORTHO05D000559 2.0e-09 66.2 50 60.0
Thecc.09G132000 Theobroma cacao HOM05D000527 ORTHO05D000559 2.0e-09 66.2 88 44.3
Nitab4.5_0009377g0040 Nicotiana tabacum HOM05D000527 ORTHO05D000559 3.4e-09 65.5 48 60.4
Sc08g0006290 Simmondsia chinensis HOM05D000527 ORTHO05D000559 3.4e-09 65.5 44 68.2
Prupe.7G248600 Prunus persica HOM05D000527 ORTHO05D000559 4.5e-09 65.1 44 68.2
Hund09283 Selenicereus undatus HOM05D000527 ORTHO05D000559 4.5e-09 65.1 91 40.7
Sopen07g003810 Solanum pennellii HOM05D000527 ORTHO05D000559 4.5e-09 65.1 110 40.0
PGSC0003DMG400030891 Solanum tuberosum HOM05D000527 ORTHO05D000559 4.5e-09 65.1 95 42.1
Haze_25510 Corylus avellana HOM05D000527 ORTHO05D000559 5.8e-09 64.7 44 65.9
Duzib168G2387 Durio zibethinus HOM05D000527 ORTHO05D000559 5.8e-09 64.7 69 52.2
Potri.018G126400 Populus trichocarpa HOM05D000527 ORTHO05D000559 5.8e-09 64.7 67 53.7
Solyc07g007930.3 Solanum lycopersicum HOM05D000527 ORTHO05D000559 5.8e-09 64.7 80 47.5
TAR625G0943 Trochodendron aralioides HOM05D000527 ORTHO05D000559 5.8e-09 64.7 44 70.5
ClCG06G011490 Citrullus lanatus HOM05D000527 ORTHO05D000559 7.6e-09 64.3 44 68.2
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 7.6e-09 64.3 78 48.7
Potri.006G065700 Populus trichocarpa HOM05D000527 ORTHO05D000559 7.6e-09 64.3 70 52.9
TWI63G0170 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 7.6e-09 64.3 44 68.2
MBI15_g13305_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 9.9e-09 63.9 81 48.1
Sabra06G0047900 Salix brachista HOM05D000527 ORTHO05D000559 9.9e-09 63.9 116 40.5
Actinidia40499 Actinidia chinensis HOM05D000527 ORTHO05D000559 1.3e-08 63.5 44 68.2
Eucgr.C04266 Eucalyptus grandis HOM05D000527 ORTHO05D000559 1.3e-08 63.5 44 65.9
Cfa003422 Carpinus fangiana HOM05D000527 ORTHO05D000559 1.7e-08 63.2 44 65.9
Hma1.2p1_0497F.1_g166370 Hydrangea macrophylla HOM05D000527 ORTHO05D000559 1.7e-08 63.2 86 44.2
Oeu055965.1 Olea europaea HOM05D000527 ORTHO05D000559 1.7e-08 63.2 44 70.5
PGR142G1648 Punica granatum HOM05D000527 ORTHO05D000559 1.7e-08 63.2 88 45.5
TWI34G1769 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 1.7e-08 63.2 48 60.4
MELO3C010314.2 Cucumis melo HOM05D000527 ORTHO05D000559 2.2e-08 62.8 44 68.2
CsaV3_1G026710 Cucumis sativus L. HOM05D000527 ORTHO05D000559 2.2e-08 62.8 44 68.2
MD02G1026200 Malus domestica HOM05D000527 ORTHO05D000559 2.2e-08 62.8 44 63.6
Oeu038256.1 Olea europaea HOM05D000527 ORTHO05D000559 2.2e-08 62.8 44 65.9
Nn2g12118 Nelumbo nucifera HOM05D000527 ORTHO05D000559 2.9e-08 62.4 44 65.9
CiPaw.03G248400 Carya illinoinensis HOM05D000527 ORTHO05D000559 3.8e-08 62.0 44 65.9
Ciclev10007519m.g Citrus clementina HOM05D000527 ORTHO05D000559 3.8e-08 62.0 44 65.9
COL.COLO4_35153 Corchorus olitorius HOM05D000527 ORTHO05D000559 3.8e-08 62.0 44 70.5
Atru.chr7.1949 Acer truncatum HOM05D000527 ORTHO05D000559 4.9e-08 61.6 44 63.6
AUR62011175 Chenopodium quinoa HOM05D000527 ORTHO05D000559 6.4e-08 61.2 44 65.9
AUR62013309 Chenopodium quinoa HOM05D000527 ORTHO05D000559 6.4e-08 61.2 44 65.9
Gohir.D08G099600 Gossypium hirsutum HOM05D000527 ORTHO05D000559 6.4e-08 61.2 44 70.5
RcHm_v2.0_Chr2g0087631 Rosa chinensis HOM05D000527 ORTHO05D000559 6.4e-08 61.2 44 63.6
Oeu000513.1 Olea europaea HOM05D000527 ORTHO05D000559 8.4e-08 60.8 44 68.2
A02p06130 Brassica napus HOM05D000527 ORTHO05D000559 1.1e-07 60.5 68 48.5
Oeu032453.1 Olea europaea HOM05D000527 ORTHO05D000559 1.1e-07 60.5 44 72.7
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.9e-07 59.7 48 56.2
BcaC03g13746 Brassica carinata HOM05D000527 ORTHO05D000559 2.4e-07 59.3 85 43.5
C09p55950 Brassica napus HOM05D000527 ORTHO05D000559 2.4e-07 59.3 75 48.0
BolC2t07030H Brassica oleracea HOM05D000527 ORTHO05D000559 2.4e-07 59.3 85 43.5
BolC9t58464H Brassica oleracea HOM05D000527 ORTHO05D000559 2.4e-07 59.3 75 48.0
FAN23G1523 Fragaria x ananassa HOM05D000527 ORTHO05D000559 2.4e-07 59.3 48 58.3
CAN.G809.83 Capsicum annuum HOM05D000527 ORTHO05D000559 3.2e-07 58.9 50 60.0
FAN19G3096 Fragaria x ananassa HOM05D000527 ORTHO05D000559 3.2e-07 58.9 48 56.2
QL02p089845 Quercus lobata HOM05D000527 ORTHO05D000559 3.2e-07 58.9 44 63.6
CANSAT11G1409 Cannabis sativa HOM05D000527 ORTHO05D000559 4.2e-07 58.5 44 63.6
Cpa.g.sc46.40 Carica papaya HOM05D000527 ORTHO05D000559 4.2e-07 58.5 44 63.6
THA.LOC104811023 Tarenaya hassleriana HOM05D000527 ORTHO05D000559 4.2e-07 58.5 80 43.8
MBI11_g11858_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 5.5e-07 58.2 44 68.2
PSO170G6092 Papaver somniferum HOM05D000527 ORTHO05D000559 5.5e-07 58.2 81 43.2
A10p19690 Brassica napus HOM05D000527 ORTHO05D000559 7.1e-07 57.8 79 45.6
BraA10t44044Z Brassica rapa HOM05D000527 ORTHO05D000559 7.1e-07 57.8 79 45.6
Manes.06G047200 Manihot esculenta HOM05D000527 ORTHO05D000559 7.1e-07 57.8 44 56.8
TAR383G0896 Trochodendron aralioides HOM05D000527 ORTHO05D000559 7.1e-07 57.8 44 63.6
CARHR192580 Cardamine hirsuta HOM05D000527 ORTHO05D000559 9.3e-07 57.4 75 45.3
CDE06G1565 Ceratophyllum demersum HOM05D000527 ORTHO05D000559 9.3e-07 57.4 62 45.2
Lalb_Chr13g0301581 Lupinus albus HOM05D000527 ORTHO05D000559 9.3e-07 57.4 44 61.4
BcaB08g36537 Brassica carinata HOM05D000527 ORTHO05D000559 1.6e-06 56.6 76 44.7
BcaC04g19415 Brassica carinata HOM05D000527 ORTHO05D000559 1.6e-06 56.6 48 54.2
Lj4g0004012 Lotus japonicus HOM05D000527 ORTHO05D000559 1.6e-06 56.6 80 40.0
SGA_v2.0_scaffold109G31072 Striga asiatica HOM05D000527 ORTHO05D000559 1.6e-06 56.6 111 37.8
BraA02t05563Z Brassica rapa HOM05D000527 ORTHO05D000559 2.1e-06 56.2 70 47.1
Manes.01G175500 Manihot esculenta HOM05D000527 ORTHO05D000559 2.1e-06 56.2 44 59.1
PSO017G5139 Papaver somniferum HOM05D000527 ORTHO05D000559 2.1e-06 56.2 44 54.5
Sp6g24160 Schrenkiella parvula HOM05D000527 ORTHO05D000559 2.1e-06 56.2 44 61.4
AT5G20250 Arabidopsis thaliana HOM05D000527 ORTHO05D000559 2.7e-06 55.8 44 59.1
Thhalv10012821m.g Eutrema salsugineum HOM05D000527 ORTHO05D000559 2.7e-06 55.8 44 61.4
FvH4_1g02620 Fragaria vesca HOM05D000527 ORTHO05D000559 2.7e-06 55.8 44 56.8
BcaB05g22856 Brassica carinata HOM05D000527 ORTHO05D000559 3.5e-06 55.5 80 41.2
Lj7A433T53 Lonicera japonica HOM05D000527 ORTHO05D000559 3.5e-06 55.5 44 56.8
arahy.Tifrunner.gnm1.ann1.UR837P Arachis hypogaea HOM05D000527 ORTHO05D000559 4.6e-06 55.1 44 54.5
Sc08g0006300 Simmondsia chinensis HOM05D000527 ORTHO05D000559 7.9e-06 54.3 44 56.8
TAR381G1310 Trochodendron aralioides HOM05D000527 ORTHO05D000559 7.9e-06 54.3 44 59.1


User provided reference genes

Program Settings