Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2577 Utricularia gibba HOM05D009357 ORTHO05D011530 1.3e-112 409.8 224 100.0
unitig_88.g27697 Utricularia gibba HOM05D000139 ORTHO05D000103 7.8e-73 277.7 223 67.7
Migut.F00036 Erythranthe guttata HOM05D000139 ORTHO05D000103 7.4e-31 138.3 162 48.1
Nitab4.5_0005858g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 5.3e-29 132.1 208 37.0
Nitab4.5_0000519g0120 Nicotiana tabacum HOM05D000139 ORTHO05D000103 5.8e-28 128.6 211 37.0
SalBow7G2522 Salvia bowleyana HOM05D000139 ORTHO05D000103 1.0e-27 127.9 137 46.0
Cc07_g01050 Coffea canephora HOM05D000139 ORTHO05D000103 2.2e-27 126.7 161 44.7
Peaxi162Scf00420g00613 Petunia axillaris HOM05D000139 ORTHO05D000103 5.5e-26 122.1 218 34.4
PGSC0003DMG400020200 Solanum tuberosum HOM05D000139 ORTHO05D000103 2.1e-25 120.2 145 43.4
Oeu035360.1 Olea europaea HOM05D000139 ORTHO05D000103 3.5e-25 119.4 156 42.9
Dinv33311 Davidia involucrata HOM05D000139 ORTHO05D000103 4.6e-25 119.0 162 42.6
Solyc02g094370.1 Solanum lycopersicum HOM05D000139 ORTHO05D000103 1.3e-24 117.5 224 35.7
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.3e-24 116.7 151 41.7
Actinidia36227 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.0e-24 116.3 155 41.3
CAN.G473.132 Capsicum annuum HOM05D000139 ORTHO05D000103 5.1e-24 115.5 197 36.0
Rhsim10G0003800 Rhododendron simsii HOM05D000139 ORTHO05D000103 5.1e-24 115.5 165 39.4
Sopen02g039020 Solanum pennellii HOM05D000139 ORTHO05D000103 5.1e-24 115.5 225 36.0
Dinv26735 Davidia involucrata HOM05D009357 ORTHO05D011530 3.3e-23 112.8 197 37.1
CSS0029814 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 5.7e-23 112.1 155 38.7
Hma1.2p1_0421F.1_g150090 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 5.7e-23 112.1 119 47.1
CSS0020733 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 2.1e-22 110.2 192 35.9
CSS0039903 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 2.1e-22 110.2 192 35.9
SalBow3G4296 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.7e-22 109.4 139 38.8
SalBow1G1799 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.4e-21 106.7 134 39.6
SalBow1G1090 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.5e-20 104.0 139 37.4
Lju41C58G1 Lonicera japonica HOM05D000139 ORTHO05D000103 2.6e-20 103.2 129 38.0
SGA_v2.0_scaffold44G16936 Striga asiatica HOM05D000139 ORTHO05D000103 2.6e-20 103.2 168 37.5
Nn3g16361 Nelumbo nucifera HOM05D000139 ORTHO05D001437 7.6e-20 101.7 133 38.3
SalBow5G4827 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.2e-18 95.9 139 36.0
SalBow1G1821 Salvia bowleyana HOM05D009357 ORTHO05D011530 7.2e-18 95.1 139 36.7
SGA_v2.0_scaffold34G13700 Striga asiatica HOM05D000139 ORTHO05D000103 9.3e-18 94.7 158 38.6
GSVIVG01000924001 Vitis vinifera HOM05D000139 ORTHO05D000103 6.1e-17 92.0 155 37.4
DCAR_014490 Daucus carota HOM05D000139 ORTHO05D000103 7.9e-17 91.7 139 30.9
TAR622G0662 Trochodendron aralioides HOM05D000139 ORTHO05D000103 1.3e-16 90.9 157 36.9
SalBow3G2989 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.3e-15 86.3 98 37.8
SalBow1G1656 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow1G7264 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow1G8117 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow2G1520 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow5G4022 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow5G5242 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow6G4255 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow6G5664 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow7G4794 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-15 85.9 98 37.8
SalBow5G2056 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.3e-14 84.3 114 36.0
Peaxi162Scf00255g00011 Petunia axillaris HOM05D000139 ORTHO05D000103 2.2e-14 83.6 123 38.2
SalBow8G4496 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.2e-14 83.6 98 36.7
SalBow6G0183 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.8e-14 83.2 98 35.7
SalBow7G0864 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.8e-14 83.2 98 36.7
SalBow4G0278 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.7e-14 82.8 98 36.7
HPP92_023158 Vanilla planifolia HOM05D000139 ORTHO05D000103 3.7e-14 82.8 152 33.6
SalBow8G2718 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.8e-14 82.4 87 40.2
SalBow3G3594 Salvia bowleyana HOM05D009357 ORTHO05D011530 6.3e-14 82.0 98 35.7
Hma1.2p1_0771F.1_g215920 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 2.4e-13 80.1 159 35.2
Sopen01g005420 Solanum pennellii HOM05D000139 ORTHO05D000103 2.4e-13 80.1 138 31.9
PSO478G1630 Papaver somniferum HOM05D000139 ORTHO05D000103 4.1e-13 79.3 132 29.5
TWI60G0954 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 5.3e-13 79.0 201 27.4
Solyc01g009880.2 Solanum lycopersicum HOM05D000139 ORTHO05D000103 6.9e-13 78.6 138 31.9
Nitab4.5_0001771g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 9.0e-13 78.2 137 33.6
Actinidia08043 Actinidia chinensis HOM05D009357 ORTHO05D023333 2.0e-12 77.0 126 33.3
PGSC0003DMG400005240 Solanum tuberosum HOM05D000139 ORTHO05D000103 2.0e-12 77.0 119 33.6
Nn4g22216 Nelumbo nucifera HOM05D000139 ORTHO05D000103 2.6e-12 76.6 153 34.0
CDE06G0190 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 3.4e-12 76.3 126 36.5
Lsat_1_v5_gn_0_3521 Lactuca sativa HOM05D000139 ORTHO05D000103 3.4e-12 76.3 169 32.0
PSO017G1372 Papaver somniferum HOM05D000139 ORTHO05D000103 3.4e-12 76.3 122 27.9
Potri.001G325600 Populus trichocarpa HOM05D000139 ORTHO05D000103 3.4e-12 76.3 225 26.2
TWI34G1887 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 3.4e-12 76.3 169 31.4
TWI32G0431 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 4.5e-12 75.9 219 34.2
Nitab4.5_0000913g0030 Nicotiana tabacum HOM05D000139 ORTHO05D000103 5.9e-12 75.5 137 34.3
MBI07_g47923_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D023333 1.0e-11 74.7 138 30.4
Cc11_g17370 Coffea canephora HOM05D000139 ORTHO05D000103 2.2e-11 73.6 132 34.8
Duzib147G0280 Durio zibethinus HOM05D000139 ORTHO05D000103 5.0e-11 72.4 156 32.7
PGR102G1089 Punica granatum HOM05D000139 ORTHO05D000103 5.0e-11 72.4 131 32.8
Sabra16G0208100 Salix brachista HOM05D000139 ORTHO05D000103 6.5e-11 72.0 231 26.0
Migut.K01019 Erythranthe guttata HOM05D000139 ORTHO05D000103 1.1e-10 71.2 119 32.8
FvH4_4g23180 Fragaria vesca HOM05D000139 ORTHO05D000103 1.4e-10 70.9 157 30.6
Thecc.04G041800 Theobroma cacao HOM05D000139 ORTHO05D000103 1.9e-10 70.5 186 29.0
Duzib187G0338 Durio zibethinus HOM05D000139 ORTHO05D000103 2.5e-10 70.1 204 25.0
MBI11_g13064_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 2.5e-10 70.1 145 29.0
Prupe.3G310000 Prunus persica HOM05D000139 ORTHO05D000103 2.5e-10 70.1 126 33.3
CAN.G1693.14 Capsicum annuum HOM05D000139 ORTHO05D000103 3.2e-10 69.7 136 33.1
FAN07G2483 Fragaria x ananassa HOM05D000139 ORTHO05D000103 3.2e-10 69.7 157 30.6
FAN12G3899 Fragaria x ananassa HOM05D000139 ORTHO05D000103 4.2e-10 69.3 157 29.9
Actinidia19567 Actinidia chinensis HOM05D000139 ORTHO05D011530 5.5e-10 68.9 90 40.0
Aqoxy3G01680 Aquilegia oxysepala HOM05D000139 ORTHO05D000103 7.2e-10 68.6 121 30.6
QL02p070581 Quercus lobata HOM05D000139 ORTHO05D000103 7.2e-10 68.6 132 33.3
Ah.03g135860 Amaranthus hybridus HOM05D000139 ORTHO05D000103 1.2e-09 67.8 125 32.0
MELO3C025086.2 Cucumis melo HOM05D000139 ORTHO05D000103 1.2e-09 67.8 156 28.8
Psat3g167520 Pisum sativum HOM05D000139 ORTHO05D000103 1.2e-09 67.8 180 30.0
Haze_14910 Corylus avellana HOM05D000139 ORTHO05D000103 1.6e-09 67.4 147 31.3
Prupe.1G220900 Prunus persica HOM05D000139 ORTHO05D000103 1.6e-09 67.4 118 33.9
Cfa007198 Carpinus fangiana HOM05D000139 ORTHO05D000103 2.1e-09 67.0 173 30.1
FAN17G2641 Fragaria x ananassa HOM05D000139 ORTHO05D000103 2.1e-09 67.0 157 29.3
CsaV3_5G024390 Cucumis sativus L. HOM05D000139 ORTHO05D000103 3.6e-09 66.2 154 27.9
EL10Ac6g13558 Beta vulgaris HOM05D000139 ORTHO05D000103 4.6e-09 65.9 145 31.7
CAN.G254.8 Capsicum annuum HOM05D000139 ORTHO05D000103 4.6e-09 65.9 110 35.5
Duzib264G0494 Durio zibethinus HOM05D000139 ORTHO05D000103 6.1e-09 65.5 159 29.6
Sabra01G0043600 Salix brachista HOM05D000139 ORTHO05D000103 6.1e-09 65.5 144 28.5
CSS0001005 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 1.0e-08 64.7 127 29.9
CSS0006876 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 1.0e-08 64.7 155 29.7
Lj1g0025409 Lotus japonicus HOM05D000139 ORTHO05D000103 1.0e-08 64.7 158 32.3
Manes.13G007100 Manihot esculenta HOM05D000139 ORTHO05D000103 1.0e-08 64.7 153 27.5
CsaV3_4G002930 Cucumis sativus L. HOM05D000139 ORTHO05D000103 1.4e-08 64.3 142 27.5
Lalb_Chr00c40g0412511 Lupinus albus HOM05D000139 ORTHO05D000103 1.4e-08 64.3 178 32.0
Lalb_Chr00c40g0412521 Lupinus albus HOM05D000139 ORTHO05D000103 1.4e-08 64.3 178 32.0
AUR62028879 Chenopodium quinoa HOM05D000139 ORTHO05D000103 1.8e-08 63.9 118 29.7
RcHm_v2.0_Chr4g0429531 Rosa chinensis HOM05D000139 ORTHO05D000103 1.8e-08 63.9 132 34.1
Manes.04G087700 Manihot esculenta HOM05D000139 ORTHO05D000103 2.3e-08 63.5 188 28.2
arahy.Tifrunner.gnm1.ann1.PF0ZRD Arachis hypogaea HOM05D000139 ORTHO05D000103 3.0e-08 63.2 153 29.4
Cpa.g.sc70.46 Carica papaya HOM05D000139 ORTHO05D000103 3.0e-08 63.2 162 25.9
CiPaw.05G105300 Carya illinoinensis HOM05D000139 ORTHO05D000103 3.0e-08 63.2 213 26.3
CiPaw.03G004900 Carya illinoinensis HOM05D000139 ORTHO05D000103 3.9e-08 62.8 150 30.0
Eucgr.H03359 Eucalyptus grandis HOM05D000139 ORTHO05D000103 3.9e-08 62.8 148 28.4
SalBow3G0982 Salvia bowleyana HOM05D000139 ORTHO05D023333 3.9e-08 62.8 118 28.8
AUR62005674 Chenopodium quinoa HOM05D000139 ORTHO05D000103 5.1e-08 62.4 150 28.0
MBI07_g44102_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 5.1e-08 62.4 111 32.4
ClCG01G008690 Citrullus lanatus HOM05D000139 ORTHO05D000103 6.7e-08 62.0 146 26.0
MD13G1124100 Malus domestica HOM05D000139 ORTHO05D000103 8.8e-08 61.6 121 31.4
DCAR_024646 Daucus carota HOM05D000139 ORTHO05D000103 1.1e-07 61.2 123 30.1
Phvul.004G070800 Phaseolus vulgaris HOM05D000139 ORTHO05D000103 1.1e-07 61.2 178 28.7
Manes.12G006900 Manihot esculenta HOM05D000139 ORTHO05D000103 1.5e-07 60.8 171 29.8
CDE02G2079 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 2.0e-07 60.5 148 31.8
Lalb_Chr24g0403231 Lupinus albus HOM05D000139 ORTHO05D000103 2.0e-07 60.5 231 26.4
Cfa009405 Carpinus fangiana HOM05D000139 ORTHO05D000103 3.3e-07 59.7 155 28.4
Potri.001G060700 Populus trichocarpa HOM05D000139 ORTHO05D000103 3.3e-07 59.7 146 28.1
SalBow1G7244 Salvia bowleyana HOM05D000139 ORTHO05D023333 3.3e-07 59.7 118 28.0
THA.LOC104822424 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 3.3e-07 59.7 215 27.9
AUR62005676 Chenopodium quinoa HOM05D000139 ORTHO05D000103 4.4e-07 59.3 115 28.7
Manes.11G084116 Manihot esculenta HOM05D000139 ORTHO05D000103 4.4e-07 59.3 185 26.5
vmacro01038 Vaccinium macrocarpon HOM05D000139 ORTHO05D000103 7.4e-07 58.5 155 29.0
Aa31LG11G15390 Aethionema arabicum HOM05D000139 ORTHO05D000103 9.7e-07 58.2 181 28.2
Ah.02g131060 Amaranthus hybridus HOM05D000139 ORTHO05D000103 9.7e-07 58.2 141 28.4
AT5G13990 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 9.7e-07 58.2 190 25.8
Haze_12463 Corylus avellana HOM05D000139 ORTHO05D000103 9.7e-07 58.2 212 25.5
MELO3C017751.2 Cucumis melo HOM05D000139 ORTHO05D000103 1.3e-06 57.8 133 26.3
Potri.017G068000 Populus trichocarpa HOM05D000139 ORTHO05D000103 1.3e-06 57.8 222 22.1
Nitab4.5_0000773g0030 Nicotiana tabacum HOM05D000139 ORTHO05D000103 1.7e-06 57.4 92 35.9
QL03p051036 Quercus lobata HOM05D000139 ORTHO05D000103 1.7e-06 57.4 123 30.1
SGA_v2.0_scaffold46G17438 Striga asiatica HOM05D000139 ORTHO05D000103 1.7e-06 57.4 123 29.3
TPR.G36656 Trifolium pratense HOM05D000139 ORTHO05D000103 1.7e-06 57.4 192 26.6
Ca_07320_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 2.2e-06 57.0 175 28.0
VMungo0464G1048 Vigna mungo HOM05D000139 ORTHO05D000103 2.2e-06 57.0 174 28.7
VMungo1383G1585 Vigna mungo HOM05D000139 ORTHO05D000103 2.2e-06 57.0 137 29.2
AUR62028881 Chenopodium quinoa HOM05D000139 ORTHO05D000103 2.8e-06 56.6 150 26.7
ClCG07G015340 Citrullus lanatus HOM05D000139 ORTHO05D000103 2.8e-06 56.6 162 26.5
ECA246G3565 Erigeron canadensis HOM05D000139 ORTHO05D000103 2.8e-06 56.6 120 27.5
Nitab4.5_0002711g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 3.7e-06 56.2 92 34.8
Sp6g30010 Schrenkiella parvula HOM05D000139 ORTHO05D000103 3.7e-06 56.2 138 28.3
CARHR199400 Cardamine hirsuta HOM05D000139 ORTHO05D000103 8.2e-06 55.1 186 25.8
COL.COLO4_13306 Corchorus olitorius HOM05D000139 ORTHO05D000103 8.2e-06 55.1 191 24.1
HanXRQChr15g0474801 Helianthus annuus HOM05D000139 ORTHO05D000103 8.2e-06 55.1 154 24.7
Medtr6g033310 Medicago truncatula HOM05D000139 ORTHO05D000103 8.2e-06 55.1 205 26.8


User provided reference genes

Program Settings