Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2185 Utricularia gibba HOM05D001051 ORTHO05D036759 1.0e-120 436.8 229 100.0
GSVIVG01029107001 Vitis vinifera HOM05D001051 ORTHO05D000886 1.2e-12 77.8 51 72.5
TAR625G1493 Trochodendron aralioides HOM05D001051 ORTHO05D000886 2.7e-12 76.6 52 69.2
MD00G1017500 Malus domestica HOM05D002382 ORTHO05D002622 7.8e-12 75.1 55 67.3
Oeu058835.1 Olea europaea HOM05D001051 ORTHO05D000886 3.0e-11 73.2 51 68.6
MD07G1300100 Malus domestica HOM05D002382 ORTHO05D002622 6.6e-11 72.0 55 63.6
Gohir.D13G215600 Gossypium hirsutum HOM05D001051 ORTHO05D000886 2.1e-09 67.0 40 75.0
Gorai.013G246000 Gossypium raimondii HOM05D001051 ORTHO05D000886 2.1e-09 67.0 40 75.0
Gohir.A13G211600 Gossypium hirsutum HOM05D001051 ORTHO05D000886 2.8e-09 66.6 39 76.9
DCAR_026289 Daucus carota HOM05D001051 ORTHO05D000886 4.8e-09 65.9 39 74.4
Os02g0178100 Oryza sativa ssp. japonica HOM05D001051 ORTHO05D000886 4.8e-09 65.9 44 70.5
Zm00001eb233790 Zea mays HOM05D001051 ORTHO05D000886 8.1e-09 65.1 44 70.5
vmacro18110 Vaccinium macrocarpon HOM05D001051 ORTHO05D000886 1.1e-08 64.7 57 52.6
Rhsim08G0079200 Rhododendron simsii HOM05D001051 ORTHO05D000886 5.3e-08 62.4 40 65.0
Nn1g03394 Nelumbo nucifera HOM05D001051 ORTHO05D000886 1.2e-07 61.2 50 62.0
SGA_v2.0_scaffold52G19040 Striga asiatica HOM05D001051 ORTHO05D000886 1.5e-07 60.8 39 66.7
Sed0023552 Sechium edule HOM05D001051 ORTHO05D000886 2.6e-07 60.1 37 70.3
Migut.H00566 Erythranthe guttata HOM05D001051 ORTHO05D000886 3.4e-07 59.7 37 70.3
MELO3C018930.2 Cucumis melo HOM05D001051 ORTHO05D000886 5.8e-07 58.9 36 69.4
CsaV3_4G009980 Cucumis sativus L. HOM05D001051 ORTHO05D000886 5.8e-07 58.9 36 69.4
Zm00001eb389540 Zea mays HOM05D001051 ORTHO05D000886 5.8e-07 58.9 42 64.3
ClCG07G016220 Citrullus lanatus HOM05D001051 ORTHO05D000886 9.9e-07 58.2 37 67.6
Os06g0275000 Oryza sativa ssp. japonica HOM05D001051 ORTHO05D000886 9.9e-07 58.2 54 57.4
Ah.16g100740 Amaranthus hybridus HOM05D001051 ORTHO05D000886 2.9e-06 56.6 37 64.9
Medtr3g034680 Medicago truncatula HOM05D001051 ORTHO05D036759 2.9e-06 56.6 44 54.5
Os09g0240200 Oryza sativa ssp. japonica HOM05D001051 ORTHO05D000886 2.9e-06 56.6 39 61.5
Nn3g18761 Nelumbo nucifera HOM05D001051 ORTHO05D000886 3.8e-06 56.2 55 56.4
Nitab4.5_0000244g0130 Nicotiana tabacum HOM05D001051 ORTHO05D000886 3.8e-06 56.2 38 68.4
Lsat_1_v5_gn_4_175001 Lactuca sativa HOM05D001051 ORTHO05D000886 6.4e-06 55.5 41 63.4
HPP92_005301 Vanilla planifolia HOM05D001051 ORTHO05D000886 8.4e-06 55.1 41 61.0


User provided reference genes

Program Settings