Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2030 Utricularia gibba HOM05D000423 ORTHO05D000284 6.8e-66 253.8 126 100.0
unitig_52.g17441 Utricularia gibba HOM05D000423 ORTHO05D000284 7.6e-33 144.1 78 89.7
MSTRG.6105 Avicennia marina HOM05D000423 ORTHO05D000284 1.4e-15 86.7 74 56.8
Migut.F02141 Erythranthe guttata HOM05D000423 ORTHO05D000284 3.5e-14 82.0 74 51.4
Oeu062054.1 Olea europaea HOM05D000423 ORTHO05D000284 1.0e-13 80.5 57 63.2
Oeu062055.1 Olea europaea HOM05D000423 ORTHO05D000284 1.0e-13 80.5 57 63.2
SGA_v2.0_scaffold62G21328 Striga asiatica HOM05D000423 ORTHO05D000284 1.0e-13 80.5 74 52.7
MSTRG.6107 Avicennia marina HOM05D000423 ORTHO05D000284 1.3e-13 80.1 74 52.7
SalBow8G5156 Salvia bowleyana HOM05D000423 ORTHO05D000284 1.3e-13 80.1 74 52.7
Cc09_g03480 Coffea canephora HOM05D000423 ORTHO05D000284 2.3e-13 79.3 74 48.6
SalBow1G6427 Salvia bowleyana HOM05D000423 ORTHO05D000284 1.1e-12 77.0 74 51.4
PGSC0003DMG400017955 Solanum tuberosum HOM05D000423 ORTHO05D000284 2.1e-11 72.8 74 48.6
Oeu057504.1 Olea europaea HOM05D000423 ORTHO05D000284 4.8e-11 71.6 74 47.3
HanXRQChr09g0258771 Helianthus annuus HOM05D000423 ORTHO05D000284 6.2e-11 71.2 57 50.9
PGSC0003DMG400006744 Solanum tuberosum HOM05D000423 ORTHO05D000284 6.2e-11 71.2 57 52.6
DCAR_029415 Daucus carota HOM05D000423 ORTHO05D000284 8.1e-11 70.9 58 51.7
CAN.G179.36 Capsicum annuum HOM05D000423 ORTHO05D000284 1.1e-10 70.5 74 45.9
SGA_v2.0_scaffold13G06470 Striga asiatica HOM05D000423 ORTHO05D000284 1.1e-10 70.5 84 44.0
Solyc01g068410.4 Solanum lycopersicum HOM05D000423 ORTHO05D000284 4.0e-10 68.6 57 50.9
Nitab4.5_0002801g0020 Nicotiana tabacum HOM05D000423 ORTHO05D000284 5.3e-10 68.2 74 45.9
DCAR_029412 Daucus carota HOM05D000423 ORTHO05D000284 6.9e-10 67.8 57 47.4
Cpa.g.c26337.3 Carica papaya HOM05D000423 ORTHO05D000284 1.2e-09 67.0 82 42.7
Lsat_1_v5_gn_8_115821 Lactuca sativa HOM05D000423 ORTHO05D000284 1.2e-09 67.0 71 40.8
Nitab4.5_0000316g0050 Nicotiana tabacum HOM05D000423 ORTHO05D000284 1.2e-09 67.0 74 44.6
DCAR_029416 Daucus carota HOM05D000423 ORTHO05D000284 1.5e-09 66.6 57 52.6
HanXRQChr16g0498241 Helianthus annuus HOM05D000423 ORTHO05D000284 1.5e-09 66.6 57 47.4
HanXRQChr16g0498251 Helianthus annuus HOM05D000423 ORTHO05D000284 1.5e-09 66.6 57 47.4
Peaxi162Scf00309g00112 Petunia axillaris HOM05D000423 ORTHO05D000284 1.5e-09 66.6 74 41.9
Nitab4.5_0000946g0100 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.0e-09 66.2 81 42.0
Lsat_1_v5_gn_8_115781 Lactuca sativa HOM05D000423 ORTHO05D000284 2.6e-09 65.9 57 50.9
Aa31LG11G13120 Aethionema arabicum HOM05D000423 ORTHO05D000284 3.4e-09 65.5 82 36.6
PGSC0003DMG400010532 Solanum tuberosum HOM05D000423 ORTHO05D000284 4.5e-09 65.1 80 41.2
Carub.0006s1473 Capsella rubella HOM05D000423 ORTHO05D000284 5.8e-09 64.7 82 39.0
DCAR_029411 Daucus carota HOM05D000423 ORTHO05D000284 5.8e-09 64.7 57 45.6
PSO017G1936 Papaver somniferum HOM05D000423 ORTHO05D000284 7.6e-09 64.3 82 39.0
PSO017G5826 Papaver somniferum HOM05D000423 ORTHO05D000284 7.6e-09 64.3 82 40.2
Haze_25718 Corylus avellana HOM05D000423 ORTHO05D000284 9.9e-09 63.9 81 39.5
PSO675G7445 Papaver somniferum HOM05D000423 ORTHO05D000284 9.9e-09 63.9 82 39.0
Sabra19G0062400 Salix brachista HOM05D000423 ORTHO05D000284 9.9e-09 63.9 82 40.2
HanXRQChr09g0258821 Helianthus annuus HOM05D000423 ORTHO05D000284 1.3e-08 63.5 71 38.0
Solyc04g056620.2 Solanum lycopersicum HOM05D000423 ORTHO05D000284 1.3e-08 63.5 55 47.3
PSO675G8688 Papaver somniferum HOM05D000423 ORTHO05D000284 1.7e-08 63.2 82 37.8
BcaB08g36843 Brassica carinata HOM05D000423 ORTHO05D000284 2.2e-08 62.8 82 39.0
A10p22670 Brassica napus HOM05D000423 ORTHO05D000284 2.2e-08 62.8 82 37.8
C09p60620 Brassica napus HOM05D000423 ORTHO05D000284 2.2e-08 62.8 82 37.8
BraA10t44328Z Brassica rapa HOM05D000423 ORTHO05D000284 2.2e-08 62.8 82 37.8
CSS0020728 Camellia sinensis var. sinensis HOM05D000423 ORTHO05D000284 2.2e-08 62.8 82 40.2
Peaxi162Scf00529g00096 Petunia axillaris HOM05D000423 ORTHO05D000284 2.9e-08 62.4 80 42.5
Peaxi162Scf01575g00006 Petunia axillaris HOM05D000423 ORTHO05D000284 2.9e-08 62.4 80 42.5
Potri.013G087000 Populus trichocarpa HOM05D000423 ORTHO05D000284 2.9e-08 62.4 82 41.5
BcaC04g18870 Brassica carinata HOM05D000423 ORTHO05D000284 3.8e-08 62.0 82 37.8
BolC9t58895H Brassica oleracea HOM05D000423 ORTHO05D000284 3.8e-08 62.0 82 37.8
AT5G16530 Arabidopsis thaliana HOM05D000423 ORTHO05D000284 4.9e-08 61.6 82 36.6
BcaB08g36842 Brassica carinata HOM05D000423 ORTHO05D000284 4.9e-08 61.6 63 41.3
Haze_04541 Corylus avellana HOM05D000423 ORTHO05D000284 4.9e-08 61.6 82 37.8
TAR633G0120 Trochodendron aralioides HOM05D000423 ORTHO05D000284 4.9e-08 61.6 82 39.0
AL6G27480 Arabidopsis lyrata HOM05D000423 ORTHO05D000284 6.4e-08 61.2 82 36.6
Thhalv10013986m.g Eutrema salsugineum HOM05D000423 ORTHO05D000284 6.4e-08 61.2 82 39.0
PSO675G6189 Papaver somniferum HOM05D000423 ORTHO05D000284 6.4e-08 61.2 82 37.8
Rhsim05G0168600 Rhododendron simsii HOM05D000423 ORTHO05D000284 6.4e-08 61.2 82 40.2
Cc10_g14830 Coffea canephora HOM05D000423 ORTHO05D000284 8.4e-08 60.8 57 45.6
Potri.019G052800 Populus trichocarpa HOM05D000423 ORTHO05D000284 8.4e-08 60.8 82 37.8
Sp6g27620 Schrenkiella parvula HOM05D000423 ORTHO05D000284 8.4e-08 60.8 82 36.6
TWI18G0557 Tripterygium wilfordii HOM05D000423 ORTHO05D000284 8.4e-08 60.8 82 37.8
Ca_07969_v3 Cicer arietinum L. HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 37.8
Hma1.2p1_0171F.1_g075800 Hydrangea macrophylla HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 39.0
Lj1g0025889 Lotus japonicus HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 39.0
Peaxi162Scf00976g00113 Petunia axillaris HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 39.0
RhsimUnG0090500 Rhododendron simsii HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 40.2
unitig_0.g1065 Utricularia gibba HOM05D000423 ORTHO05D000284 1.1e-07 60.5 65 40.0
VMungo1383G3053 Vigna mungo HOM05D000423 ORTHO05D000284 1.1e-07 60.5 82 37.8
GSVIVG01019110001 Vitis vinifera HOM05D000423 ORTHO05D000284 1.4e-07 60.1 87 37.9
Atru.chr12.1802 Acer truncatum HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 37.8
ATR0782G118 Amborella trichopoda HOM05D000423 ORTHO05D000284 1.9e-07 59.7 57 47.4
EL10Ac4g09980 Beta vulgaris HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 37.8
Lj1A583G10 Lonicera japonica HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 39.0
Prupe.6G360300 Prunus persica HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 39.0
vmacro10413 Vaccinium macrocarpon HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 40.2
GSVIVG01019126001 Vitis vinifera HOM05D000423 ORTHO05D000284 1.9e-07 59.7 82 40.2
Cfa006271 Carpinus fangiana HOM05D000421 ORTHO05D001007 2.4e-07 59.3 82 36.6
Eucgr.B01405 Eucalyptus grandis HOM05D000423 ORTHO05D000284 2.4e-07 59.3 82 37.8
HanXRQChr05g0132571 Helianthus annuus HOM05D000423 ORTHO05D000284 2.4e-07 59.3 82 37.8
Nitab4.5_0000083g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.4e-07 59.3 82 39.0
Thecc.05G201200 Theobroma cacao HOM05D000423 ORTHO05D000284 2.4e-07 59.3 82 37.8
Actinidia03830 Actinidia chinensis HOM05D000423 ORTHO05D000284 3.2e-07 58.9 82 35.4
Actinidia06810 Actinidia chinensis HOM05D000423 ORTHO05D000284 3.2e-07 58.9 82 37.8
Dinv29115 Davidia involucrata HOM05D000423 ORTHO05D000284 3.2e-07 58.9 82 39.0
FAN02G1471 Fragaria x ananassa HOM05D000423 ORTHO05D000284 3.2e-07 58.9 82 37.8
THA.LOC104802948 Tarenaya hassleriana HOM05D000423 ORTHO05D000284 3.2e-07 58.9 82 37.8
arahy.Tifrunner.gnm1.ann1.953E9B Arachis hypogaea HOM05D000423 ORTHO05D000284 4.2e-07 58.5 77 39.0
arahy.Tifrunner.gnm1.ann1.K2GLG1 Arachis hypogaea HOM05D000423 ORTHO05D000284 4.2e-07 58.5 77 39.0
Duzib128G0255 Durio zibethinus HOM05D000423 ORTHO05D000284 4.2e-07 58.5 71 38.0
MD12G1259500 Malus domestica HOM05D000423 ORTHO05D000284 4.2e-07 58.5 82 37.8
PGR119G1797 Punica granatum HOM05D000423 ORTHO05D000284 4.2e-07 58.5 82 36.6
Gohir.A05G390800 Gossypium hirsutum HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 37.8
Gohir.D04G026400 Gossypium hirsutum HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 37.8
Gorai.012G029000 Gossypium raimondii HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 37.8
Phvul.008G055200 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 36.6
QL01p049050 Quercus lobata HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 36.6
Sabra13G0077000 Salix brachista HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 37.8
vmacro19611 Vaccinium macrocarpon HOM05D000423 ORTHO05D000284 5.5e-07 58.2 82 37.8
Cc09_g03470 Coffea canephora HOM05D000423 ORTHO05D000284 7.1e-07 57.8 82 36.6
MD04G1205100 Malus domestica HOM05D000423 ORTHO05D000284 7.1e-07 57.8 82 37.8
MD04G1243800 Malus domestica HOM05D000423 ORTHO05D000284 7.1e-07 57.8 82 37.8
FvH4_6g00660 Fragaria vesca HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
FAN05G5271 Fragaria x ananassa HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
FAN09G1229 Fragaria x ananassa HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
FAN14G5277 Fragaria x ananassa HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
Glyma.09G251600 Glycine max HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
MBI07_g22284_MAGBIO Magnolia biondii HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
Nn1g09750 Nelumbo nucifera HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 37.8
RcHm_v2.0_Chr3g0448071 Rosa chinensis HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 36.6
Sc09g0001530 Simmondsia chinensis HOM05D000423 ORTHO05D000284 9.3e-07 57.4 82 37.8
CiPaw.07G079100 Carya illinoinensis HOM05D000423 ORTHO05D000284 1.2e-06 57.0 82 34.1
TPR.G30357 Trifolium pratense HOM05D000423 ORTHO05D000284 1.2e-06 57.0 82 35.4
ATR0782G078 Amborella trichopoda HOM05D000423 ORTHO05D000284 1.6e-06 56.6 57 45.6
Lsat_1_v5_gn_2_54280 Lactuca sativa HOM05D000423 ORTHO05D000284 1.6e-06 56.6 82 35.4
Sed0010241 Sechium edule HOM05D000423 ORTHO05D000284 1.6e-06 56.6 82 37.8
CANSAT54G0756 Cannabis sativa HOM05D000423 ORTHO05D000284 2.1e-06 56.2 82 36.6
Nitab4.5_0000946g0090 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.1e-06 56.2 82 37.8
SalBow6G2455 Salvia bowleyana HOM05D000423 ORTHO05D000284 2.1e-06 56.2 74 37.8
Psat3g103640 Pisum sativum HOM05D000423 ORTHO05D000284 2.7e-06 55.8 82 35.4
TAR362G0258 Trochodendron aralioides HOM05D000423 ORTHO05D000284 2.7e-06 55.8 82 36.6
CANSAT54G0368 Cannabis sativa HOM05D000423 ORTHO05D000284 3.5e-06 55.5 82 34.1
ClCG11G010850 Citrullus lanatus HOM05D000423 ORTHO05D000284 3.5e-06 55.5 82 35.4
DCAR_028391 Daucus carota HOM05D000423 ORTHO05D000284 3.5e-06 55.5 82 34.1
Sabra17G0069600 Salix brachista HOM05D000423 ORTHO05D000284 3.5e-06 55.5 74 39.2
Dinv02955 Davidia involucrata HOM05D000423 ORTHO05D000284 4.6e-06 55.1 82 36.6
ECA238G1146 Erigeron canadensis HOM05D000423 ORTHO05D000284 4.6e-06 55.1 82 35.4
Glyma.18G241000 Glycine max HOM05D000423 ORTHO05D000284 4.6e-06 55.1 57 35.1
Manes.09G184701 Manihot esculenta HOM05D000423 ORTHO05D000284 4.6e-06 55.1 82 35.4
Medtr7g079720 Medicago truncatula HOM05D000423 ORTHO05D000284 4.6e-06 55.1 82 35.4
Potri.014G146800 Populus trichocarpa HOM05D000423 ORTHO05D000284 4.6e-06 55.1 62 40.3
Rhsim09G0129100 Rhododendron simsii HOM05D000423 ORTHO05D000284 4.6e-06 55.1 57 40.4
CsaV3_2G009610 Cucumis sativus L. HOM05D000423 ORTHO05D000284 6.0e-06 54.7 82 34.1
Oeu024980.1 Olea europaea HOM05D000423 ORTHO05D000284 6.0e-06 54.7 43 53.5
Sabra14G0110200 Salix brachista HOM05D000423 ORTHO05D000284 7.9e-06 54.3 62 38.7
SMO146G0004 Selaginella moellendorffii HOM05D000423 ORTHO05D000284 7.9e-06 54.3 76 39.5


User provided reference genes

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