Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2024 Utricularia gibba HOM05D005636 ORTHO05D006912 1.6e-185 652.5 313 100.0
SGA_v2.0_scaffold130G34360 Striga asiatica HOM05D005636 ORTHO05D006912 2.7e-87 326.2 323 51.7
Migut.M00513 Erythranthe guttata HOM05D005636 ORTHO05D006912 3.5e-87 325.9 334 50.9
Cc05_g09330 Coffea canephora HOM05D005636 ORTHO05D006912 1.0e-86 324.3 237 62.0
SalBow7G3906 Salvia bowleyana HOM05D005636 ORTHO05D006912 6.6e-86 321.6 335 50.4
Oeu020065.1 Olea europaea HOM05D005636 ORTHO05D006912 1.5e-85 320.5 222 64.9
Oeu040028.1 Olea europaea HOM05D005636 ORTHO05D006912 5.6e-85 318.5 226 63.7
Dinv31558 Davidia involucrata HOM05D005636 ORTHO05D006912 9.5e-85 317.8 339 48.1
Lj6g0012077 Lotus japonicus HOM05D005636 ORTHO05D006912 2.8e-84 316.2 298 53.4
Phvul.002G231100 Phaseolus vulgaris HOM05D005636 ORTHO05D006912 6.1e-84 315.1 224 63.4
Lsat_1_v5_gn_8_32020 Lactuca sativa HOM05D005636 ORTHO05D006912 8.0e-84 314.7 233 60.9
ECA233G1750 Erigeron canadensis HOM05D005636 ORTHO05D006912 1.0e-83 314.3 219 63.9
Glyma.20G056400 Glycine max HOM05D005636 ORTHO05D006912 1.0e-83 314.3 239 61.1
Actinidia11200 Actinidia chinensis HOM05D005636 ORTHO05D006912 3.1e-83 312.8 231 62.3
Phvul.005G057920 Phaseolus vulgaris HOM05D005636 ORTHO05D006912 4.0e-83 312.4 224 63.4
Sopen07g029330 Solanum pennellii HOM05D005636 ORTHO05D006912 5.2e-83 312.0 226 63.3
PGSC0003DMG400017343 Solanum tuberosum HOM05D005636 ORTHO05D006912 5.2e-83 312.0 226 62.8
HanXRQChr12g0369761 Helianthus annuus HOM05D005636 ORTHO05D006912 6.8e-83 311.6 231 60.6
SalBow7G1748 Salvia bowleyana HOM05D005636 ORTHO05D006912 1.5e-82 310.5 221 64.7
Solyc07g055980.3 Solanum lycopersicum HOM05D005636 ORTHO05D006912 1.5e-82 310.5 226 62.8
Medtr1g046360 Medicago truncatula HOM05D005636 ORTHO05D006912 5.8e-82 308.5 222 62.6
Nitab4.5_0001675g0040 Nicotiana tabacum HOM05D005636 ORTHO05D006912 5.8e-82 308.5 226 62.4
CSS0038062 Camellia sinensis var. sinensis HOM05D005636 ORTHO05D006912 1.3e-81 307.4 227 60.8
Hma1.2p1_0722F.1_g208750 Hydrangea macrophylla HOM05D005636 ORTHO05D006912 3.7e-81 305.8 268 54.1
Cpa.g.sc50.79 Carica papaya HOM05D005636 ORTHO05D006912 4.9e-81 305.4 231 59.7
Nitab4.5_0005557g0010 Nicotiana tabacum HOM05D005636 ORTHO05D006912 4.9e-81 305.4 220 63.2
CAN.G585.52 Capsicum annuum HOM05D005636 ORTHO05D006912 8.3e-81 304.7 226 61.5
HanXRQChr13g0387431 Helianthus annuus HOM05D005636 ORTHO05D006912 8.3e-81 304.7 231 60.2
Lalb_Chr17g0335961 Lupinus albus HOM05D005636 ORTHO05D006912 8.3e-81 304.7 242 58.7
RcHm_v2.0_Chr2g0151351 Rosa chinensis HOM05D005636 ORTHO05D006912 1.1e-80 304.3 246 58.1
Medtr3g079530 Medicago truncatula HOM05D005636 ORTHO05D006912 1.9e-80 303.5 222 62.2
THA.LOC104802275 Tarenaya hassleriana HOM05D005636 ORTHO05D006912 1.9e-80 303.5 231 59.7
Ciclev10031950m.g Citrus clementina HOM05D005636 ORTHO05D006912 4.1e-80 302.4 223 62.3
Aa31LG10G13390 Aethionema arabicum HOM05D005636 ORTHO05D006912 7.0e-80 301.6 227 60.4
Lalb_Chr04g0257641 Lupinus albus HOM05D005636 ORTHO05D006912 7.0e-80 301.6 222 62.6
Potri.002G060600 Populus trichocarpa HOM05D005636 ORTHO05D006912 7.0e-80 301.6 223 61.0
Manes.02G084000 Manihot esculenta HOM05D005636 ORTHO05D006912 9.2e-80 301.2 292 50.3
TPR.G37891 Trifolium pratense HOM05D005636 ORTHO05D006912 9.2e-80 301.2 238 58.4
MELO3C014464.2 Cucumis melo HOM05D005636 ORTHO05D006912 1.2e-79 300.8 237 58.6
TAR627G0895 Trochodendron aralioides HOM05D005636 ORTHO05D006912 1.2e-79 300.8 227 60.4
CARHR169230 Cardamine hirsuta HOM05D005636 ORTHO05D006912 1.6e-79 300.4 227 59.5
FAN09G4115 Fragaria x ananassa HOM05D005636 ORTHO05D006912 1.6e-79 300.4 227 60.4
MSTRG.6754 Avicennia marina HOM05D005636 ORTHO05D006912 2.0e-79 300.1 244 60.2
Eucgr.K01200 Eucalyptus grandis HOM05D005636 ORTHO05D006912 2.7e-79 299.7 276 52.9
FvH4_6g38130 Fragaria vesca HOM05D005636 ORTHO05D006912 2.7e-79 299.7 227 60.4
FAN05G0596 Fragaria x ananassa HOM05D005636 ORTHO05D006912 2.7e-79 299.7 227 60.4
FAN14G2746 Fragaria x ananassa HOM05D005636 ORTHO05D006912 2.7e-79 299.7 227 60.4
Carub.0005s2561 Capsella rubella HOM05D005636 ORTHO05D006912 3.5e-79 299.3 240 57.5
MD17G1140200 Malus domestica HOM05D005636 ORTHO05D006912 3.5e-79 299.3 231 59.3
PGSC0003DMG400007795 Solanum tuberosum HOM05D005636 ORTHO05D006912 3.5e-79 299.3 226 60.2
C06p25760 Brassica napus HOM05D005636 ORTHO05D006912 4.6e-79 298.9 223 61.4
BolC6t37738H Brassica oleracea HOM05D005636 ORTHO05D006912 4.6e-79 298.9 223 61.4
Ca_16256_v3 Cicer arietinum L. HOM05D005636 ORTHO05D006912 4.6e-79 298.9 222 61.3
Sabra02G0049100 Salix brachista HOM05D005636 ORTHO05D006912 4.6e-79 298.9 263 54.4
COL.COLO4_33742 Corchorus olitorius HOM05D005636 ORTHO05D006912 6.0e-79 298.5 223 60.1
Gorai.012G041700 Gossypium raimondii HOM05D005636 ORTHO05D006912 6.0e-79 298.5 224 59.8
Nitab4.5_0006934g0010 Nicotiana tabacum HOM05D005636 ORTHO05D006912 6.0e-79 298.5 222 61.7
Sopen12g006380 Solanum pennellii HOM05D005636 ORTHO05D006912 6.0e-79 298.5 226 59.7
AL5G40630 Arabidopsis lyrata HOM05D005636 ORTHO05D006912 7.8e-79 298.1 291 50.9
Gohir.A05G378700 Gossypium hirsutum HOM05D005636 ORTHO05D006912 7.8e-79 298.1 265 54.0
Gohir.D04G036900 Gossypium hirsutum HOM05D005636 ORTHO05D006912 7.8e-79 298.1 224 59.8
Peaxi162Scf00807g00219 Petunia axillaris HOM05D005636 ORTHO05D006912 7.8e-79 298.1 222 60.8
AT3G58830 Arabidopsis thaliana HOM05D005636 ORTHO05D006912 1.0e-78 297.7 283 51.6
BcaB02g07496 Brassica carinata HOM05D005636 ORTHO05D006912 1.0e-78 297.7 223 61.0
A07p24370 Brassica napus HOM05D005636 ORTHO05D006912 1.0e-78 297.7 223 61.0
BraA07t30084Z Brassica rapa HOM05D005636 ORTHO05D006912 1.0e-78 297.7 223 61.0
CsaV3_6G038020 Cucumis sativus L. HOM05D005636 ORTHO05D006912 1.0e-78 297.7 237 58.6
Solyc12g011020.2 Solanum lycopersicum HOM05D005636 ORTHO05D006912 1.0e-78 297.7 265 53.6
Duzib187G1993 Durio zibethinus HOM05D005636 ORTHO05D006912 1.3e-78 297.4 224 59.8
Sp5g04030 Schrenkiella parvula HOM05D005636 ORTHO05D006912 1.3e-78 297.4 243 57.2
Atru.chr1.3606 Acer truncatum HOM05D005636 ORTHO05D006912 1.7e-78 297.0 242 57.4
BcaC08g44944 Brassica carinata HOM05D005636 ORTHO05D006912 2.3e-78 296.6 222 61.3
Cfa022913 Carpinus fangiana HOM05D005636 ORTHO05D006912 3.0e-78 296.2 221 59.7
GSVIVG01000791001 Vitis vinifera HOM05D005636 ORTHO05D006912 3.0e-78 296.2 222 59.5
Thhalv10006084m.g Eutrema salsugineum HOM05D005636 ORTHO05D006912 3.9e-78 295.8 240 57.5
Thecc.01G161100 Theobroma cacao HOM05D005636 ORTHO05D006912 5.0e-78 295.4 245 56.3
MD09G1152800 Malus domestica HOM05D005636 ORTHO05D006912 6.6e-78 295.0 231 58.4
Psat5g112320 Pisum sativum HOM05D005636 ORTHO05D006912 8.6e-78 294.7 238 56.7
Sabra05G0153000 Salix brachista HOM05D005636 ORTHO05D006912 1.1e-77 294.3 222 58.6
CAN.G164.23 Capsicum annuum HOM05D005636 ORTHO05D006912 1.5e-77 293.9 222 59.9
Aqoxy1G01878 Aquilegia oxysepala HOM05D005636 ORTHO05D006912 1.9e-77 293.5 227 58.1
CiPaw.03G189200 Carya illinoinensis HOM05D005636 ORTHO05D006912 2.5e-77 293.1 219 61.6
THA.LOC104803221 Tarenaya hassleriana HOM05D005636 ORTHO05D006912 4.3e-77 292.4 233 57.9
Potri.005G201100 Populus trichocarpa HOM05D005636 ORTHO05D006912 9.5e-77 291.2 222 57.7
Peaxi162Scf00111g00031 Petunia axillaris HOM05D005636 ORTHO05D006912 3.6e-76 289.3 226 59.3
Rhsim06G0118100 Rhododendron simsii HOM05D005636 ORTHO05D006912 1.1e-75 287.7 281 50.9
Prupe.3G171400 Prunus persica HOM05D005636 ORTHO05D006912 1.8e-75 287.0 227 58.6
Sed0000049 Sechium edule HOM05D005636 ORTHO05D006912 1.8e-75 287.0 237 57.0
arahy.Tifrunner.gnm1.ann1.59ND6F Arachis hypogaea HOM05D005636 ORTHO05D006912 6.8e-75 285.0 252 53.2
PSO675G1578 Papaver somniferum HOM05D005636 ORTHO05D006912 6.8e-75 285.0 224 55.4
PSO541G3223 Papaver somniferum HOM05D005636 ORTHO05D006912 8.9e-75 284.6 220 55.9
PGR142G4384 Punica granatum HOM05D005636 ORTHO05D006912 2.6e-74 283.1 279 51.3
VMungo0540G1884 Vigna mungo HOM05D005636 ORTHO05D006912 1.7e-73 280.4 198 65.2
Nn6g34386 Nelumbo nucifera HOM05D005636 ORTHO05D006912 2.9e-73 279.6 238 53.4
ClCG09G022370 Citrullus lanatus HOM05D005636 ORTHO05D006912 1.4e-72 277.3 258 51.9
VMungo0540G1461 Vigna mungo HOM05D005636 ORTHO05D006912 4.6e-71 272.3 189 65.6
ATR0763G116 Amborella trichopoda HOM05D005636 ORTHO05D006912 1.7e-70 270.4 213 58.2
QL08p044016 Quercus lobata HOM05D005636 ORTHO05D006912 3.9e-70 269.2 192 64.6
BcaC08g44945 Brassica carinata HOM05D005636 ORTHO05D006912 8.6e-70 268.1 223 56.5
TWI59G0166 Tripterygium wilfordii HOM05D005636 ORTHO05D006912 9.5e-69 264.6 223 56.1
vmacro12452 Vaccinium macrocarpon HOM05D005636 ORTHO05D006912 2.8e-68 263.1 284 47.9
CAN.G732.7 Capsicum annuum HOM05D005636 ORTHO05D006912 1.5e-66 257.3 202 61.4
SEGI_36348 Sequoiadendron giganteum HOM05D005636 ORTHO05D006912 1.5e-66 257.3 249 48.6
Nitab4.5_0000446g0070 Nicotiana tabacum HOM05D005636 ORTHO05D006912 2.6e-66 256.5 334 41.6
CDE08G0457 Ceratophyllum demersum HOM05D005636 ORTHO05D006912 3.4e-66 256.1 213 54.5
Sc14g0000770 Simmondsia chinensis HOM05D005636 ORTHO05D006912 5.8e-66 255.4 217 53.0
Hma1.2p1_0888F.1_g232810 Hydrangea macrophylla HOM05D005636 ORTHO05D006912 2.9e-65 253.1 235 52.8
arahy.Tifrunner.gnm1.ann1.LGDT7B Arachis hypogaea HOM05D005636 ORTHO05D006912 1.9e-64 250.4 166 67.5
SMO367G0867 Selaginella moellendorffii HOM05D005636 ORTHO05D006912 1.6e-63 247.3 214 53.3
EL10Ac8g19235 Beta vulgaris HOM05D005636 ORTHO05D006912 2.1e-63 246.9 227 50.2
AagrBONN_evm.TU.Sc2ySwM_228.4819 Anthoceros agrestis HOM05D005636 ORTHO05D006912 7.8e-63 245.0 212 50.5
Pp3c4_17380 Physcomitrium patens HOM05D005636 ORTHO05D006912 1.3e-62 244.2 229 46.7
AUR62033992 Chenopodium quinoa HOM05D005636 ORTHO05D006912 3.0e-62 243.0 217 49.3
AUR62027489 Chenopodium quinoa HOM05D005636 ORTHO05D006912 6.6e-62 241.9 217 49.3
Mapoly0095s0041 Marchantia polymorpha HOM05D005636 ORTHO05D006912 1.1e-61 241.1 217 48.4
SGA_v2.0_scaffold70G23671 Striga asiatica HOM05D005636 ORTHO05D006912 1.1e-61 241.1 253 47.4
Ah.04g158730 Amaranthus hybridus HOM05D005636 ORTHO05D006912 1.6e-60 237.3 217 48.8
Os01g0796500 Oryza sativa ssp. japonica HOM05D005636 ORTHO05D006912 8.1e-60 235.0 217 51.6
HPP92_010206 Vanilla planifolia HOM05D002349 ORTHO05D002464 6.8e-59 231.9 182 59.3
MSTRG.14295 Avicennia marina HOM05D005636 ORTHO05D006912 2.7e-55 219.9 151 65.6
CANSAT64G2722 Cannabis sativa HOM05D005636 ORTHO05D006912 6.6e-54 215.3 151 65.6
Haze_13492 Corylus avellana HOM05D005636 ORTHO05D006912 5.6e-53 212.2 156 61.5
CBR_g66789 Chara braunii HOM05D005636 ORTHO05D006912 1.6e-52 210.7 183 50.3
Actinidia32519 Actinidia chinensis HOM05D005636 ORTHO05D006912 2.9e-49 199.9 231 45.5
Cre04.g219900 Chlamydomonas reinhardtii HOM05D005636 ORTHO05D006912 4.2e-48 196.1 200 43.5
Lj1A625T29 Lonicera japonica HOM05D005636 ORTHO05D006912 4.8e-44 182.6 149 55.0
MCO16G670 Micromonas commoda HOM05D005636 ORTHO05D006912 2.9e-41 173.3 164 49.4
PRCOL_00003225 Prasinoderma coloniale HOM05D005636 ORTHO05D006912 7.4e-37 158.7 237 37.1
AagrBONN_evm.TU.Sc2ySwM_344.2384 Anthoceros agrestis HOM05D005636 ORTHO05D006912 4.9e-33 146.0 117 53.8
DCAR_009796 Daucus carota HOM05D005636 ORTHO05D006912 2.5e-32 143.7 316 31.0
RcHm_v2.0_Chr2g0151251 Rosa chinensis HOM05D005636 ORTHO05D006912 2.8e-28 130.2 94 61.7
AagrBONN_evm.TU.Sc2ySwM_344.2381 Anthoceros agrestis HOM05D005636 ORTHO05D006912 1.9e-21 107.5 91 53.8
Zm00001eb150880 Zea mays HOM05D005636 ORTHO05D006912 1.8e-19 100.9 131 39.7
CAN.G44.13 Capsicum annuum HOM05D005636 ORTHO05D006912 4.1e-19 99.8 67 70.1
CAN.G1530.4 Capsicum annuum HOM05D005636 ORTHO05D017742 2.0e-13 80.9 59 62.7
Cfa023890 Carpinus fangiana HOM05D005636 ORTHO05D123467 2.2e-09 67.4 107 35.5
A04p02350 Brassica napus HOM05D005636 ORTHO05D006912 3.0e-06 57.0 52 57.7


User provided reference genes

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