Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 2.5e-172 608.6 294 100.0
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 2.4e-90 336.3 296 61.1
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.6e-81 307.0 305 55.7
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 2.7e-81 306.2 298 57.7
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.1e-79 300.8 305 54.8
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 5.6e-79 298.5 304 55.9
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 7.3e-79 298.1 211 68.2
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 9.5e-79 297.7 227 66.1
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 9.5e-79 297.7 297 58.2
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 1.6e-78 297.0 221 67.9
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.1e-78 296.6 213 68.1
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 2.8e-78 296.2 296 56.1
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.8e-78 296.2 291 57.4
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 4.7e-78 295.4 212 68.4
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 4.7e-78 295.4 212 69.3
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 6.2e-78 295.0 251 61.8
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.1e-78 294.7 230 64.8
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.1e-78 294.7 230 64.8
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 6.8e-77 291.6 227 64.8
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 8.9e-77 291.2 299 53.8
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.5e-76 290.4 215 65.1
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-76 290.4 251 61.4
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 1.5e-76 290.4 286 56.6
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.0e-76 290.0 299 54.2
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 3.4e-76 289.3 297 54.9
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.4e-76 288.9 256 57.8
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.4e-76 288.9 256 57.8
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 5.8e-76 288.5 303 53.5
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 7.6e-76 288.1 293 55.3
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.3e-75 287.3 242 62.4
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.3e-75 287.3 219 65.3
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 1.3e-75 287.3 214 65.4
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.9e-75 286.2 300 54.7
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 4.9e-75 285.4 240 62.5
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 4.9e-75 285.4 230 64.3
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 6.4e-75 285.0 261 57.1
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 6.4e-75 285.0 232 62.9
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 6.4e-75 285.0 251 59.0
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 8.4e-75 284.6 214 64.5
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 1.1e-74 284.3 248 62.5
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.4e-74 283.9 300 54.3
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 1.9e-74 283.5 298 54.4
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.9e-74 283.5 284 54.6
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.9e-74 283.5 249 59.8
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.9e-74 283.5 213 65.7
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.4e-74 283.1 213 65.3
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 3.2e-74 282.7 255 58.8
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 4.1e-74 282.3 213 65.3
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 4.1e-74 282.3 213 64.8
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 5.4e-74 282.0 250 59.2
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 5.4e-74 282.0 214 65.0
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 5.4e-74 282.0 214 65.0
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 9.2e-74 281.2 249 59.8
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.6e-73 280.4 213 63.8
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.6e-73 280.4 214 64.5
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.6e-73 280.4 204 67.6
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 2.1e-73 280.0 201 68.7
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 2.7e-73 279.6 214 64.0
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.7e-73 279.6 309 52.4
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 3.5e-73 279.3 211 64.9
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 4.6e-73 278.9 214 64.0
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 6.0e-73 278.5 215 64.2
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 7.8e-73 278.1 203 67.5
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.0e-72 277.7 270 55.6
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.0e-72 277.7 303 50.2
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.3e-72 277.3 213 64.3
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 3.0e-72 276.2 216 62.5
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 3.9e-72 275.8 215 63.3
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 3.9e-72 275.8 257 59.1
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 5.1e-72 275.4 299 51.8
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 6.6e-72 275.0 196 67.3
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 6.6e-72 275.0 269 56.5
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 8.6e-72 274.6 213 63.4
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 2.5e-71 273.1 213 62.4
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 2.5e-71 273.1 223 62.8
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 3.3e-71 272.7 212 65.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 4.3e-71 272.3 263 53.2
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 5.6e-71 271.9 296 54.4
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 7.3e-71 271.6 279 52.3
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 2.8e-70 269.6 218 61.5
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 5.2e-69 265.4 248 55.2
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.2e-67 260.0 254 54.3
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 7.8e-65 251.5 215 62.3
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 9.6e-63 244.6 197 60.9
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 6.9e-61 238.4 321 45.2
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 9.0e-61 238.0 213 57.7
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.4e-58 230.7 288 46.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 9.3e-58 228.0 188 58.5
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.7e-57 226.5 278 47.5
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.8e-56 223.8 220 54.5
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.5e-55 220.7 187 58.3
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 4.8e-54 215.7 156 66.7
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 9.9e-52 208.0 187 55.6
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.3e-51 207.6 185 55.1
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 6.4e-51 205.3 192 54.7
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 3.2e-50 203.0 168 59.5
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 8.7e-48 194.9 134 64.9
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 1.4e-45 187.6 264 44.7
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 4.0e-45 186.0 234 47.4
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 1.3e-40 171.0 113 71.7
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 6.7e-40 168.7 189 50.3
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 1.3e-38 164.5 197 47.7
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 2.1e-38 163.7 111 71.2
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.1e-37 161.4 138 59.4
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.1e-37 159.8 104 72.1
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 5.3e-37 159.1 187 44.9
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.2e-36 157.9 107 71.0
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.2e-36 157.9 107 71.0
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 5.9e-36 155.6 127 63.8
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.0e-35 154.8 155 54.2
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.7e-35 154.1 155 54.8
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 8.7e-32 141.7 110 64.5
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 4.3e-31 139.4 93 67.7
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 7.4e-31 138.7 135 54.8
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.1e-29 132.9 93 68.8
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 1.5e-28 131.0 109 58.7
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 2.7e-17 93.6 114 50.0
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 6.1e-17 92.4 88 55.7
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 5.2e-16 89.4 191 32.5
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.3e-11 74.7 110 41.8


User provided reference genes

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