Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 2.2e-278 961.8 560 100.0
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 9.5e-136 488.0 541 59.3
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 1.0e-134 484.6 534 59.4
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 1.4e-134 484.2 547 57.6
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 4.4e-133 479.2 515 58.6
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 6.4e-132 475.3 550 55.5
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.6e-130 470.7 548 55.8
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 3.5e-130 469.5 538 56.7
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.7e-124 450.7 541 54.5
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.7e-124 450.7 595 55.5
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 2.9e-124 449.9 572 55.2
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 3.7e-124 449.5 539 54.2
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.4e-123 447.6 530 59.1
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.1e-123 446.0 533 56.1
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.1e-123 446.0 536 57.3
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.2e-122 444.5 525 56.6
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 1.0e-121 441.4 536 54.7
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 2.3e-121 440.3 519 58.0
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 1.5e-120 437.6 510 58.2
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 1.9e-120 437.2 536 55.2
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 1.9e-120 437.2 562 53.2
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 3.3e-120 436.4 529 54.1
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 3.3e-120 436.4 572 55.1
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 6.2e-119 432.2 545 56.0
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 8.1e-119 431.8 536 56.5
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 4.0e-118 429.5 542 55.9
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 8.9e-118 428.3 516 50.8
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 1.5e-117 427.6 541 55.3
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 2.6e-117 426.8 536 56.3
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 2.6e-117 426.8 537 56.1
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 2.2e-116 423.7 540 55.2
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 4.9e-116 422.5 587 48.4
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 6.4e-116 422.2 546 53.7
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 8.3e-116 421.8 516 55.4
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 1.4e-115 421.0 533 53.7
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 2.4e-115 420.2 529 54.6
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 5.4e-115 419.1 536 54.3
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 5.4e-115 419.1 508 56.7
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.2e-114 417.9 541 54.0
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 1.6e-114 417.5 538 53.3
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.6e-114 417.5 523 56.2
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.6e-114 417.5 568 50.7
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 2.1e-114 417.2 516 55.4
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 2.7e-114 416.8 555 51.7
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 3.5e-114 416.4 564 47.9
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 4.6e-114 416.0 539 55.5
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 6.0e-114 415.6 542 54.2
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 6.0e-114 415.6 532 56.2
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 1.3e-113 414.5 533 55.2
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 1.3e-113 414.5 579 51.5
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 2.3e-113 413.7 534 52.6
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 6.6e-113 412.1 543 53.4
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 1.1e-112 411.4 562 52.3
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 1.1e-112 411.4 528 55.7
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 1.5e-112 411.0 529 55.6
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.5e-112 411.0 546 51.3
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 7.3e-112 408.7 533 55.5
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 7.3e-112 408.7 548 54.0
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.2e-111 407.9 541 54.7
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.2e-111 407.9 547 52.3
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 2.1e-111 407.1 558 51.1
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 8.1e-111 405.2 557 49.0
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 1.4e-110 404.4 549 52.3
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 1.8e-110 404.1 526 49.4
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 2.4e-110 403.7 524 55.0
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 5.2e-110 402.5 539 48.2
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 8.9e-110 401.7 528 54.9
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 2.6e-109 400.2 515 55.9
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 4.4e-109 399.4 527 54.6
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 7.6e-109 398.7 534 53.2
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 1.3e-108 397.9 531 55.2
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 1.3e-108 397.9 518 53.9
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 2.2e-108 397.1 528 48.9
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 2.9e-108 396.7 559 52.6
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 3.8e-108 396.4 527 55.0
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.9e-107 394.0 528 53.8
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 4.1e-107 392.9 540 53.0
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 5.4e-107 392.5 529 51.8
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 9.2e-107 391.7 530 54.2
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 2.1e-106 390.6 531 52.9
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 3.5e-106 389.8 600 48.8
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 5.1e-105 386.0 515 51.8
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 8.7e-105 385.2 570 48.6
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.1e-104 384.8 481 48.6
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 7.3e-104 382.1 524 49.2
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 9.6e-104 381.7 512 46.7
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 1.2e-103 381.3 557 49.6
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 8.1e-103 378.6 505 53.7
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 4.0e-102 376.3 518 52.7
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 4.0e-102 376.3 536 49.4
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 5.2e-102 375.9 504 54.8
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 9.0e-102 375.2 554 48.6
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 3.4e-101 373.2 500 45.4
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.9e-100 370.2 507 54.0
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.9e-99 367.5 500 52.4
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 4.2e-99 366.3 502 52.4
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 5.4e-99 365.9 536 49.3
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 1.6e-98 364.4 504 54.4
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 3.5e-98 363.2 515 52.2
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.0e-97 361.7 502 48.8
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 3.9e-97 359.8 550 48.4
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.8e-94 350.9 533 49.7
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 2.4e-94 350.5 467 55.0
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 5.8e-93 345.9 541 49.2
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 1.3e-92 344.7 522 47.1
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.7e-92 344.4 534 47.2
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 1.9e-88 330.9 520 46.9
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 3.3e-88 330.1 340 59.4
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 1.8e-81 307.8 578 43.9
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.5e-80 304.7 519 43.0
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.3e-80 303.5 477 43.6
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 9.6e-80 302.0 523 43.8
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 4.0e-78 296.6 338 53.0
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 4.9e-76 289.7 524 44.5
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 1.1e-75 288.5 459 42.9
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 3.8e-68 263.5 553 35.8
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.1e-64 251.9 497 37.2
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.5e-64 250.8 369 47.2
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 2.0e-56 224.6 155 76.8
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 4.1e-54 216.9 211 60.2
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 6.1e-50 203.0 147 73.5
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 8.0e-50 202.6 233 49.8
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 3.3e-48 197.2 124 82.3
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 4.4e-48 196.8 232 47.8
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 5.7e-48 196.4 364 40.4
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 8.2e-47 192.6 251 47.8
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 6.5e-44 183.0 379 43.5
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 5.9e-37 159.8 244 45.1
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 2.5e-35 154.5 249 38.6
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 7.2e-35 152.9 191 49.2
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 7.2e-35 152.9 191 49.2
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.3e-28 132.1 104 70.2
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.1e-22 110.5 142 47.2
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 1.0e-20 105.9 151 47.0
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 6.6e-20 103.2 246 33.3
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 1.1e-19 102.4 114 50.0
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 5.6e-19 100.1 62 82.3
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 4.1e-14 84.0 62 69.4
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.3e-12 79.0 47 85.1
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 6.6e-12 76.6 66 65.2
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 1.2e-10 72.4 74 51.4
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.2e-10 72.4 67 53.7
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 6.2e-10 70.1 69 55.1
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.4e-08 64.3 37 78.4
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 3.4e-08 64.3 84 47.6
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 4.4e-08 63.9 101 41.6
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 8.3e-07 59.7 51 64.7
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.1e-06 59.3 71 52.1
Medtr0130s0060 Medicago truncatula HOM05D003167 ORTHO05D003929 9.2e-06 56.2 38 73.7


User provided reference genes

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