Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 3.4e-125 452.2 328 100.0
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 1.6e-79 300.4 329 56.2
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.6e-77 293.1 345 58.3
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 6.0e-74 282.0 340 54.4
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 2.4e-70 270.0 339 62.5
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 2.4e-70 270.0 339 62.5
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 2.0e-69 266.9 326 64.1
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 4.5e-69 265.8 202 71.3
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 2.2e-68 263.5 335 50.7
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 3.8e-68 262.7 338 62.7
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 1.1e-67 261.2 342 50.0
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 1.1e-67 261.2 197 70.1
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 9.3e-67 258.1 342 49.1
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 1.2e-66 257.7 218 64.7
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 4.6e-66 255.8 329 51.1
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 6.1e-66 255.4 337 48.1
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 7.9e-66 255.0 197 68.0
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.0e-65 254.6 199 70.4
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 1.0e-65 254.6 199 70.4
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.3e-65 254.2 199 70.4
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 1.3e-65 254.2 343 48.4
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 2.3e-65 253.4 200 68.0
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 2.3e-65 253.4 197 70.6
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 3.9e-65 252.7 199 69.3
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.1e-65 252.3 199 69.3
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 6.7e-65 251.9 345 48.1
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 1.5e-64 250.8 196 68.9
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 1.5e-64 250.8 202 69.8
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 2.5e-64 250.0 329 49.5
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 5.7e-64 248.8 343 56.3
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 5.7e-64 248.8 334 54.5
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 5.7e-64 248.8 197 69.5
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 9.7e-64 248.1 199 68.8
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 9.7e-64 248.1 199 67.8
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 1.6e-63 247.3 201 67.2
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 6.3e-63 245.4 196 65.8
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 8.2e-63 245.0 203 65.5
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 1.1e-62 244.6 343 53.4
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 3.1e-62 243.0 192 69.3
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 5.3e-62 242.3 196 66.8
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 5.3e-62 242.3 347 59.1
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 5.3e-62 242.3 337 58.2
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.2e-61 241.1 202 64.9
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 5.9e-61 238.8 336 47.6
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 1.0e-60 238.0 340 48.2
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 2.2e-60 236.9 196 64.8
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 3.8e-60 236.1 197 65.5
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 1.4e-59 234.2 198 64.6
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 1.9e-59 233.8 332 48.2
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 5.5e-59 232.3 340 50.3
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 2.1e-58 230.3 204 62.3
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 2.7e-58 229.9 203 61.6
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 4.6e-58 229.2 197 62.9
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 6.1e-58 228.8 198 63.6
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 6.1e-58 228.8 193 65.3
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.8e-57 227.3 198 65.2
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 1.8e-57 227.3 320 48.1
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 1.8e-57 227.3 198 65.2
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 2.3e-57 226.9 202 60.9
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 3.0e-57 226.5 203 61.1
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 3.0e-57 226.5 203 61.6
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 3.9e-57 226.1 190 66.3
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 3.9e-57 226.1 202 59.4
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 3.9e-57 226.1 200 60.5
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 5.1e-57 225.7 203 61.1
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 5.1e-57 225.7 204 59.8
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 6.7e-57 225.3 203 60.6
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 6.7e-57 225.3 202 61.4
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 1.5e-56 224.2 326 49.1
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 2.0e-56 223.8 320 47.5
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 2.6e-56 223.4 201 63.7
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 3.3e-56 223.0 200 60.0
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 3.3e-56 223.0 203 59.6
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 3.3e-56 223.0 200 64.0
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 5.7e-56 222.2 325 50.8
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 7.4e-56 221.9 331 46.5
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 9.7e-56 221.5 202 58.4
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 9.7e-56 221.5 195 62.6
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 2.8e-55 219.9 199 61.8
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 4.8e-55 219.2 372 43.0
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 6.3e-55 218.8 199 62.3
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 6.3e-55 218.8 214 58.4
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 8.2e-55 218.4 199 63.3
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.4e-54 216.9 196 62.2
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 4.1e-54 216.1 343 44.6
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 9.1e-54 214.9 200 62.5
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.2e-53 214.5 203 60.6
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 1.5e-53 214.2 346 43.6
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 7.7e-53 211.8 149 72.5
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.3e-52 211.1 203 60.6
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 1.3e-52 211.1 148 71.6
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 3.8e-52 209.5 203 58.6
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 3.8e-52 209.5 203 59.6
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 3.8e-52 209.5 203 58.6
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 3.8e-52 209.5 203 59.6
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 8.5e-52 208.4 203 58.1
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 8.5e-52 208.4 197 62.4
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 1.1e-51 208.0 200 58.5
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 1.4e-51 207.6 196 63.3
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 1.9e-51 207.2 200 61.5
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 1.9e-51 207.2 329 44.1
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 3.2e-51 206.5 203 59.1
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 9.4e-51 204.9 197 61.4
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.7e-50 203.4 199 61.3
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 6.1e-50 202.2 196 59.2
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.8e-49 200.7 199 60.8
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 7.4e-48 195.3 350 41.7
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.8e-47 192.6 199 58.8
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 6.3e-47 192.2 199 58.3
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 8.2e-47 191.8 190 60.0
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 5.3e-46 189.1 146 68.5
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.5e-45 186.4 199 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 1.3e-44 184.5 206 53.4
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 2.2e-44 183.7 361 39.6
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 3.2e-43 179.9 156 61.5
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 7.2e-43 178.7 329 52.0
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.7e-42 176.8 193 53.9
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 3.0e-41 173.3 272 47.1
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 4.0e-41 172.9 209 49.8
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 5.2e-41 172.6 198 52.5
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.5e-40 171.0 166 54.8
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 5.7e-40 169.1 192 53.1
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 2.7e-37 160.2 214 50.0
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 2.9e-36 156.8 183 51.9
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 3.8e-36 156.4 192 50.5
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 1.1e-35 154.8 203 48.8
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 2.5e-35 153.7 153 54.9
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 7.2e-35 152.1 150 58.0
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 1.4e-33 147.9 212 44.3
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 1.7e-31 141.0 127 62.2
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 2.2e-31 140.6 199 46.2
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 1.3e-20 104.8 136 44.9
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 3.0e-17 93.6 98 55.1
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 3.0e-17 93.6 148 37.8
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 4.0e-17 93.2 60 75.0
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 2.7e-13 80.5 87 55.2
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 6.2e-10 69.3 189 34.4
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 8.3e-07 58.9 34 85.3
GSVIVG01034858001 Vitis vinifera HOM05D004913 ORTHO05D006150 1.4e-06 58.2 58 53.4


User provided reference genes

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