Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 0.0e+00 1610.9 862 100.0
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 3.0e-165 586.6 1017 39.0
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 1.3e-155 554.7 1027 38.4
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 1.0e-144 518.5 1075 35.3
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 4.2e-135 486.5 1123 33.2
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 1.6e-118 431.4 975 32.9
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 2.3e-117 427.6 973 32.7
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 6.4e-115 419.5 959 32.8
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 1.6e-113 414.8 1040 31.4
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 1.6e-113 414.8 1040 31.4
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 2.7e-113 414.1 1048 31.4
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 1.4e-106 391.7 1019 30.6
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 3.9e-104 383.6 1064 29.1
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 7.3e-103 379.4 1056 29.8
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 5.2e-101 373.2 1012 29.8
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 7.6e-100 369.4 934 30.8
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 9.9e-100 369.0 1089 29.8
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 2.9e-99 367.5 1012 30.4
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 8.4e-99 365.9 1048 29.5
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 1.9e-98 364.8 1047 30.3
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 5.4e-98 363.2 962 30.8
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 7.1e-98 362.8 1006 30.1
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 2.1e-97 361.3 1019 30.4
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 1.3e-96 358.6 1094 29.1
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.7e-96 358.2 1012 29.5
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.1e-95 355.5 991 30.0
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 3.3e-95 354.0 1040 29.0
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 1.4e-93 348.6 1062 28.5
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 1.8e-93 348.2 985 29.8
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 6.9e-93 346.3 1082 28.9
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 9.0e-93 345.9 1072 27.9
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 3.4e-92 344.0 1122 27.8
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 2.2e-91 341.3 1050 29.3
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.4e-90 338.6 1069 28.9
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 5.4e-90 336.7 1017 29.2
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 7.1e-90 336.3 1069 28.8
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 2.7e-89 334.3 760 32.4
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 4.6e-89 333.6 983 29.3
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 7.8e-89 332.8 1056 27.8
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 3.0e-88 330.9 1099 26.7
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 2.5e-87 327.8 1017 27.7
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 7.3e-87 326.2 1054 28.0
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 1.3e-86 325.5 987 29.1
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.1e-86 324.7 1146 27.1
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 1.8e-85 321.6 1051 28.3
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 3.1e-85 320.9 1022 28.5
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 5.3e-85 320.1 1021 29.2
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 1.2e-84 318.9 1030 28.7
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 1.5e-84 318.5 1045 28.1
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 9.9e-84 315.8 1023 27.9
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 9.9e-84 315.8 1020 27.7
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 9.9e-84 315.8 1029 28.0
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 1.3e-83 315.5 1006 28.4
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 1.3e-83 315.5 1006 29.0
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 2.9e-83 314.3 993 28.0
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 2.9e-83 314.3 1010 28.0
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 2.9e-83 314.3 1034 28.7
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 6.4e-83 313.2 1023 28.5
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 8.4e-83 312.8 1050 27.5
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 7.1e-82 309.7 1012 28.2
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 1.6e-81 308.5 998 28.1
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 4.6e-81 307.0 1015 28.7
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 7.9e-81 306.2 952 29.4
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 5.1e-80 303.5 1027 26.5
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 5.1e-80 303.5 1018 28.4
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 1.9e-79 301.6 1030 28.7
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 1.9e-79 301.6 1123 27.0
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 4.8e-78 297.0 1013 30.5
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 6.2e-78 296.6 1031 27.9
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 1.4e-77 295.4 1095 26.5
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 3.8e-75 287.3 953 25.8
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 4.9e-75 287.0 900 27.7
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 1.1e-74 285.8 1172 26.6
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 2.4e-74 284.6 1062 25.1
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 6.0e-73 280.0 979 25.6
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 6.7e-72 276.6 1036 26.4
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 3.3e-71 274.2 954 27.4
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 4.8e-70 270.4 985 27.4
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 5.3e-69 266.9 981 28.3
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 1.5e-68 265.4 921 28.1
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 6.5e-59 233.4 458 32.1
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 6.7e-56 223.4 365 36.2
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 4.3e-55 220.7 1025 24.4
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 1.3e-54 219.2 1431 21.2
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 9.1e-45 186.4 680 27.1
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 5.9e-44 183.7 445 27.6
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.9e-44 183.7 210 47.1
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.3e-43 182.6 275 41.5
COL.COLO4_35068 Corchorus olitorius HOM05D004493 ORTHO05D005117 1.9e-42 178.7 270 42.2
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 4.2e-42 177.6 736 26.1
Gohir.A08G083000 Gossypium hirsutum HOM05D004493 ORTHO05D005117 7.2e-42 176.8 272 41.5
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 3.0e-40 171.4 248 36.3
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.0e-39 168.7 278 38.8
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 2.0e-39 168.7 196 43.4
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 2.0e-39 168.7 254 34.6
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 3.3e-39 167.9 244 41.4
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 3.3e-39 167.9 247 37.2
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 8.2e-38 163.3 748 26.1
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 8.2e-38 163.3 748 26.1
Solyc02g032380.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.2e-36 159.5 266 39.8
Ah.06g182280 Amaranthus hybridus HOM05D004493 ORTHO05D005117 2.2e-35 155.2 276 38.8
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 2.9e-35 154.8 432 28.9
Solyc02g032480.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.5e-34 150.6 572 26.6
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 7.2e-34 150.2 195 42.1
Peaxi162Scf00186g01612 Petunia axillaris HOM05D004493 ORTHO05D005117 4.0e-32 144.4 545 25.7
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 1.5e-31 142.5 946 22.4
CDE02G1557 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 1.5e-31 142.5 556 27.2
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 7.5e-31 140.2 157 49.0
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 7.5e-31 140.2 196 43.4
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.4e-29 135.2 246 34.1
Nitab4.5_0000075g0170 Nicotiana tabacum HOM05D004493 ORTHO05D005117 2.0e-28 132.1 217 39.2
Peaxi162Scf00186g00168 Petunia axillaris HOM05D004493 ORTHO05D005117 4.2e-26 124.4 202 40.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 8.0e-25 120.2 179 45.3
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 5.2e-24 117.5 1014 22.2
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 9.8e-23 113.2 148 43.9
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 8.3e-22 110.2 976 21.8
MSTRG.929 Avicennia marina HOM05D004493 ORTHO05D005117 8.6e-19 100.1 146 45.9
Potri.001G001201 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.1e-18 99.8 239 31.8
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.0e-16 93.2 156 34.0
Zm00001eb202920 Zea mays HOM05D004493 ORTHO05D005117 3.7e-14 84.7 145 33.1
SalBow3G1183 Salvia bowleyana HOM05D004493 ORTHO05D005117 5.4e-13 80.9 107 48.6
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 1.3e-11 76.3 364 24.2
Cpa.g.sc119.16 Carica papaya HOM05D004493 ORTHO05D005117 2.3e-11 75.5 86 46.5
SEGI_27502 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 2.3e-11 75.5 196 31.6
FAN14G4108 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.5e-10 70.1 135 34.1
MSTRG.12811 Avicennia marina HOM05D004493 ORTHO05D005117 2.8e-09 68.6 112 43.8
FAN03G1805 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.8e-09 68.6 186 30.1
Hma1.2p1_0589F.1_g184750 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 3.1e-08 65.1 90 36.7
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 4.0e-08 64.7 66 45.5
FAN14G5048 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.2e-07 63.2 63 46.0
ATR0906G002 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.5e-07 62.8 147 30.6
ATR0906G001 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.7e-06 59.3 213 26.8
Lj2A889T20 Lonicera japonica HOM05D004493 ORTHO05D005117 1.7e-06 59.3 107 43.9
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 2.9e-06 58.5 62 41.9
FAN12G3781 Fragaria x ananassa HOM05D004493 ORTHO05D005117 3.7e-06 58.2 59 45.8


User provided reference genes

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