Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1177 Utricularia gibba HOM05D006806 ORTHO05D008448 1.1e-62 243.0 116 100.0
FAN15G1766 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.9e-36 154.8 134 61.2
FAN20G0869 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.9e-36 154.8 134 61.2
FAN27G1603 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.9e-36 154.8 134 61.2
CAN.G339.30 Capsicum annuum HOM05D006806 ORTHO05D008448 6.7e-36 154.1 104 69.2
GSVIVG01027979001 Vitis vinifera HOM05D006806 ORTHO05D008448 6.7e-36 154.1 114 65.8
HanXRQChr15g0465711 Helianthus annuus HOM05D006806 ORTHO05D008448 8.8e-36 153.7 105 71.4
Duzib133G0508 Durio zibethinus HOM05D006806 ORTHO05D008448 1.1e-35 153.3 112 67.0
RcHm_v2.0_Chr6g0293671 Rosa chinensis HOM05D006806 ORTHO05D008448 1.5e-35 152.9 110 67.3
Lj1C32T0 Lonicera japonica HOM05D006806 ORTHO05D008448 2.6e-35 152.1 114 64.0
Cfa005945 Carpinus fangiana HOM05D006806 ORTHO05D008448 5.7e-35 151.0 110 68.2
Atru.chr5.1178 Acer truncatum HOM05D006806 ORTHO05D008448 7.4e-35 150.6 112 66.1
MSTRG.21623 Avicennia marina HOM05D006806 ORTHO05D008448 7.4e-35 150.6 113 66.4
FvH4_2g25440 Fragaria vesca HOM05D006806 ORTHO05D008448 7.4e-35 150.6 134 60.4
Dinv19713 Davidia involucrata HOM05D006806 ORTHO05D008448 9.7e-35 150.2 113 62.8
Lalb_Chr21g0312551 Lupinus albus HOM05D006806 ORTHO05D008448 9.7e-35 150.2 95 71.6
Aqoxy5G00723 Aquilegia oxysepala HOM05D006806 ORTHO05D008448 1.3e-34 149.8 113 62.8
CSS0020680 Camellia sinensis var. sinensis HOM05D006806 ORTHO05D008448 1.3e-34 149.8 110 67.3
ECA247G0015 Erigeron canadensis HOM05D006806 ORTHO05D008448 1.3e-34 149.8 105 69.5
QL12p027175 Quercus lobata HOM05D006806 ORTHO05D008448 1.7e-34 149.4 108 67.6
Gohir.A12G010900 Gossypium hirsutum HOM05D006806 ORTHO05D008448 2.2e-34 149.1 108 65.7
Gorai.008G011300 Gossypium raimondii HOM05D006806 ORTHO05D008448 2.2e-34 149.1 110 62.7
Lsat_1_v5_gn_9_1100 Lactuca sativa HOM05D006806 ORTHO05D008448 2.2e-34 149.1 98 71.4
Haze_04900 Corylus avellana HOM05D006806 ORTHO05D008448 2.8e-34 148.7 110 66.4
COL.COLO4_23371 Corchorus olitorius HOM05D006806 ORTHO05D008448 3.7e-34 148.3 112 66.1
Migut.D00198 Erythranthe guttata HOM05D006806 ORTHO05D008448 4.8e-34 147.9 114 64.0
Nitab4.5_0000619g0080 Nicotiana tabacum HOM05D006806 ORTHO05D008448 4.8e-34 147.9 104 67.3
Manes.05G063800 Manihot esculenta HOM05D006806 ORTHO05D008448 6.3e-34 147.5 111 64.0
Solyc09g074920.3 Solanum lycopersicum HOM05D006806 ORTHO05D008448 6.3e-34 147.5 104 67.3
AL6G50560 Arabidopsis lyrata HOM05D006806 ORTHO05D008448 8.2e-34 147.1 96 71.9
MELO3C017969.2 Cucumis melo HOM05D006806 ORTHO05D008448 8.2e-34 147.1 113 61.9
FAN15G0699 Fragaria x ananassa HOM05D006806 ORTHO05D008448 8.2e-34 147.1 134 59.0
Gohir.D12G011300 Gossypium hirsutum HOM05D006806 ORTHO05D008448 8.2e-34 147.1 113 61.1
FAN24G3039 Fragaria x ananassa HOM05D006806 ORTHO05D008448 1.1e-33 146.7 134 59.7
MD11G1304900 Malus domestica HOM05D006806 ORTHO05D008448 1.1e-33 146.7 104 68.3
Sp6g02400 Schrenkiella parvula HOM05D006806 ORTHO05D008448 1.1e-33 146.7 96 71.9
DCAR_002818 Daucus carota HOM05D006806 ORTHO05D008448 1.4e-33 146.4 104 67.3
Prupe.8G258600 Prunus persica HOM05D006806 ORTHO05D008448 1.4e-33 146.4 110 64.5
EL10Ac7g17440 Beta vulgaris HOM05D006806 ORTHO05D008448 1.8e-33 146.0 103 67.0
AUR62008620 Chenopodium quinoa HOM05D006806 ORTHO05D008448 1.8e-33 146.0 105 66.7
Sabra14G0097600 Salix brachista HOM05D006806 ORTHO05D008448 1.8e-33 146.0 111 64.0
Sed0021826 Sechium edule HOM05D006806 ORTHO05D008448 1.8e-33 146.0 106 65.1
Carub.0006s3464 Capsella rubella HOM05D006806 ORTHO05D008448 2.4e-33 145.6 96 70.8
Thhalv10028943m.g Eutrema salsugineum HOM05D006806 ORTHO05D008448 2.4e-33 145.6 96 69.8
PGSC0003DMG400011394 Solanum tuberosum HOM05D006806 ORTHO05D008448 3.1e-33 145.2 104 66.3
Sopen09g029740 Solanum pennellii HOM05D006806 ORTHO05D008448 4.1e-33 144.8 104 66.3
AT4G02485 Arabidopsis thaliana HOM05D006806 ORTHO05D008448 5.3e-33 144.4 96 71.9
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 5.3e-33 144.4 99 70.7
BcaNung04058 Brassica carinata HOM05D006806 ORTHO05D008448 1.2e-32 143.3 95 71.6
BolC9t53133H Brassica oleracea HOM05D006806 ORTHO05D008448 1.2e-32 143.3 95 71.6
BraA09t35844Z Brassica rapa HOM05D006806 ORTHO05D008448 1.2e-32 143.3 95 71.6
ClCG10G010640 Citrullus lanatus HOM05D006806 ORTHO05D008448 1.2e-32 143.3 113 61.1
MBI19_g29223_MAGBIO Magnolia biondii HOM05D006806 ORTHO05D008448 1.2e-32 143.3 111 59.5
Potri.014G131200 Populus trichocarpa HOM05D006806 ORTHO05D008448 1.2e-32 143.3 111 62.2
C09p02030 Brassica napus HOM05D006806 ORTHO05D008448 1.5e-32 142.9 95 70.5
Rhsim13G0012300 Rhododendron simsii HOM05D006806 ORTHO05D008448 1.5e-32 142.9 109 63.3
vmacro02466 Vaccinium macrocarpon HOM05D006806 ORTHO05D008448 1.5e-32 142.9 109 65.1
CARHR250790 Cardamine hirsuta HOM05D006806 ORTHO05D008448 2.0e-32 142.5 97 70.1
TWI59G0641 Tripterygium wilfordii HOM05D006806 ORTHO05D008448 2.0e-32 142.5 106 64.2
TAR365G0408 Trochodendron aralioides HOM05D006806 ORTHO05D008448 2.0e-32 142.5 110 61.8
Actinidia24336 Actinidia chinensis HOM05D006806 ORTHO05D008448 2.6e-32 142.1 113 63.7
Aa31LG5G2120 Aethionema arabicum HOM05D006806 ORTHO05D008448 2.6e-32 142.1 95 69.5
Ciclev10021759m.g Citrus clementina HOM05D006806 ORTHO05D008448 2.6e-32 142.1 112 61.6
Thecc.01G297500 Theobroma cacao HOM05D006806 ORTHO05D008448 2.6e-32 142.1 112 63.4
BcaB01g02036 Brassica carinata HOM05D006806 ORTHO05D008448 3.5e-32 141.7 95 70.5
Eucgr.H01159 Eucalyptus grandis HOM05D006806 ORTHO05D008448 3.5e-32 141.7 112 62.5
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 4.5e-32 141.4 94 69.1
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 4.5e-32 141.4 94 69.1
A09p01940 Brassica napus HOM05D006806 ORTHO05D008448 5.9e-32 141.0 96 70.8
Cc01_g20670 Coffea canephora HOM05D006806 ORTHO05D008448 7.7e-32 140.6 107 64.5
LjContig00310g0013469 Lotus japonicus HOM05D006806 ORTHO05D008448 7.7e-32 140.6 106 63.2
Cpa.g.sc9.212 Carica papaya HOM05D006806 ORTHO05D008448 1.0e-31 140.2 113 62.8
HPP92_014223 Vanilla planifolia HOM05D006806 ORTHO05D008448 1.0e-31 140.2 104 58.7
PGR119G0665 Punica granatum HOM05D006806 ORTHO05D008448 1.3e-31 139.8 108 60.2
PGR119G2452 Punica granatum HOM05D006806 ORTHO05D008448 1.3e-31 139.8 108 60.2
Hund05413 Selenicereus undatus HOM05D006806 ORTHO05D008448 1.3e-31 139.8 106 63.2
Glyma.14G026500 Glycine max HOM05D006806 ORTHO05D008448 2.9e-31 138.7 97 66.0
Peaxi162Scf00067g02523 Petunia axillaris HOM05D006806 ORTHO05D008448 2.9e-31 138.7 104 63.5
SalBow3G1555 Salvia bowleyana HOM05D006806 ORTHO05D008448 3.8e-31 138.3 94 71.3
Oeu046692.2 Olea europaea HOM05D006806 ORTHO05D008448 5.0e-31 137.9 106 65.1
ATR0796G300 Amborella trichopoda HOM05D006806 ORTHO05D008448 6.5e-31 137.5 113 59.3
Hma1.2p1_0209F.1_g088570 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 1.1e-30 136.7 114 58.8
Phvul.008G264300 Phaseolus vulgaris HOM05D006806 ORTHO05D008448 2.5e-30 135.6 96 65.6
CANSAT25G0048 Cannabis sativa HOM05D006806 ORTHO05D008448 4.2e-30 134.8 107 59.8
CANSAT25G1656 Cannabis sativa HOM05D006806 ORTHO05D008448 5.5e-30 134.4 108 59.3
Hma1.2p1_0209F.1_g088560 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 5.5e-30 134.4 111 58.6
VMungo0647G0123 Vigna mungo HOM05D006806 ORTHO05D008448 5.5e-30 134.4 96 64.6
THA.LOC104801266 Tarenaya hassleriana HOM05D006806 ORTHO05D008448 1.2e-29 133.3 97 67.0
CiPaw.07G106700 Carya illinoinensis HOM05D006806 ORTHO05D008448 1.6e-29 132.9 99 64.6
Ca_06294_v3 Cicer arietinum L. HOM05D006806 ORTHO05D008448 2.7e-29 132.1 96 64.6
Os11g0657200 Oryza sativa ssp. japonica HOM05D006806 ORTHO05D008448 6.1e-29 131.0 105 60.0
Zm00001eb115680 Zea mays HOM05D006806 ORTHO05D008448 2.3e-28 129.0 105 56.2
AagrBONN_evm.TU.Sc2ySwM_117.167 Anthoceros agrestis HOM05D006806 ORTHO05D008448 5.2e-28 127.9 98 62.2
Medtr5g091920 Medicago truncatula HOM05D006806 ORTHO05D008448 6.7e-28 127.5 123 55.3
Psat2g014480 Pisum sativum HOM05D006806 ORTHO05D008448 8.8e-28 127.1 96 63.5
Nn3g21440 Nelumbo nucifera HOM05D006806 ORTHO05D008448 2.6e-24 115.5 97 57.7
SMO364G0875 Selaginella moellendorffii HOM05D006806 ORTHO05D008448 5.9e-24 114.4 95 57.9
CANSAT25G2513 Cannabis sativa HOM05D006806 ORTHO05D008448 1.3e-23 113.2 94 58.5
Pp3c19_16790 Physcomitrium patens HOM05D006806 ORTHO05D008448 1.9e-22 109.4 95 55.8
Nitab4.5_0003901g0060 Nicotiana tabacum HOM05D006806 ORTHO05D008448 1.6e-21 106.3 80 62.5
Mapoly0003s0075 Marchantia polymorpha HOM05D006806 ORTHO05D008448 5.3e-17 91.3 145 35.2
BcaNung04061 Brassica carinata HOM05D000714 ORTHO05D008448 1.5e-14 83.2 59 66.1
AUR62033171 Chenopodium quinoa HOM05D006806 ORTHO05D008448 4.2e-14 81.6 56 69.6
Lj1A1G13 Lonicera japonica HOM05D006806 ORTHO05D008448 7.2e-14 80.9 70 57.1
Glyma.14G026566 Glycine max HOM05D006806 ORTHO05D008448 2.0e-11 72.8 66 48.5
CDE02G3512 Ceratophyllum demersum HOM05D006806 ORTHO05D008448 7.0e-09 64.3 45 55.6
Duzib116G0666 Durio zibethinus HOM05D006806 ORTHO05D008448 6.6e-07 57.8 30 80.0
PRCOL_00002936 Prasinoderma coloniale HOM05D006806 ORTHO05D008448 6.6e-07 57.8 98 34.7
MCO10G232 Micromonas commoda HOM05D006806 ORTHO05D008448 1.5e-06 56.6 108 33.3
Lsat_1_v5_gn_6_17400 Lactuca sativa HOM05D007105 ORTHO05D009304 5.5e-06 54.7 96 32.3


User provided reference genes

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